Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 1.8e-196 689.1 352 100.0
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 8.2e-69 265.0 329 50.8
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.3e-68 262.3 348 47.4
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 1.5e-67 260.8 344 48.5
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 2.0e-67 260.4 324 48.8
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 3.4e-67 259.6 329 48.6
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.9e-67 258.8 350 48.0
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 5.9e-67 258.8 326 46.0
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 5.9e-67 258.8 322 48.1
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.7e-66 257.3 357 45.9
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 6.5e-66 255.4 343 47.5
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 1.1e-65 254.6 328 47.6
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.4e-65 254.2 349 47.3
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 9.4e-65 251.5 330 47.6
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 9.4e-65 251.5 327 45.9
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 1.2e-64 251.1 326 46.6
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 2.1e-64 250.4 356 44.1
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.8e-63 247.3 331 45.0
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.8e-63 247.3 346 44.8
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 5.1e-63 245.7 331 44.7
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 2.6e-62 243.4 324 45.4
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 4.4e-62 242.7 339 46.3
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 5.7e-62 242.3 331 44.7
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 9.7e-62 241.5 326 45.7
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 3.7e-61 239.6 290 47.2
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.4e-60 237.7 327 43.4
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 5.9e-59 232.3 327 45.3
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 1.0e-58 231.5 315 44.4
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 2.9e-58 229.9 327 44.6
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 2.9e-58 229.9 315 45.1
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 3.8e-58 229.6 313 46.6
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 3.8e-58 229.6 327 46.2
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 8.5e-58 228.4 328 42.7
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.5e-57 227.6 302 46.0
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 3.2e-57 226.5 309 43.7
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 5.5e-57 225.7 298 46.3
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 7.2e-57 225.3 336 44.6
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 7.2e-57 225.3 318 47.5
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 9.4e-57 224.9 317 45.1
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 9.4e-57 224.9 327 44.3
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.2e-56 224.6 324 40.4
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 1.6e-56 224.2 353 42.8
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 4.7e-56 222.6 354 41.5
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 6.1e-56 222.2 341 40.8
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 1.4e-55 221.1 303 45.2
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.8e-55 220.7 351 42.2
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 5.2e-55 219.2 311 44.7
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.5e-54 217.6 352 41.8
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 2.6e-54 216.9 325 42.2
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 2.2e-53 213.8 317 42.3
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 2.2e-53 213.8 327 43.1
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 2.2e-53 213.8 311 41.8
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 8.2e-53 211.8 333 40.2
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 1.8e-52 210.7 300 44.0
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.8e-52 210.7 318 41.8
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 2.4e-52 210.3 327 41.6
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 9.1e-52 208.4 311 42.4
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 2.0e-51 207.2 329 41.6
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 2.0e-51 207.2 333 40.2
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 7.7e-51 205.3 294 46.3
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 1.1e-49 201.4 268 47.0
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 3.2e-49 199.9 296 43.6
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 7.2e-49 198.7 273 46.9
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 3.6e-48 196.4 292 45.2
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 6.1e-48 195.7 329 41.6
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 5.2e-47 192.6 257 47.5
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 6.8e-47 192.2 316 39.2
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 8.8e-47 191.8 257 47.5
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 9.8e-46 188.3 304 40.8
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 8.3e-45 185.3 313 41.5
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 4.1e-44 183.0 241 47.7
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 1.0e-42 178.3 299 38.5
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 1.5e-41 174.5 292 41.4
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 5.5e-41 172.6 301 38.9
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 7.2e-41 172.2 294 40.8
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 6.3e-37 159.1 310 37.4
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 3.1e-36 156.8 319 36.1
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 5.4e-36 156.0 202 49.0
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 7.0e-36 155.6 266 39.8
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.0e-35 154.1 297 38.7
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.0e-35 154.1 297 38.7
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.0e-34 151.8 325 35.7
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 2.3e-34 150.6 325 35.7
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 8.6e-34 148.7 302 35.8
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 2.5e-33 147.1 260 39.2
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 1.6e-32 144.4 261 38.7
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 4.4e-30 136.3 285 34.7
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 9.8e-30 135.2 283 35.3
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 2.2e-29 134.0 208 42.8
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 2.9e-29 133.7 304 33.9
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 3.7e-29 133.3 299 34.1
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 1.1e-28 131.7 195 45.6
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 3.2e-28 130.2 335 33.1
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 5.4e-28 129.4 327 33.3
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 5.4e-28 129.4 335 33.1
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 5.9e-27 125.9 288 34.0
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 1.0e-26 125.2 109 57.8
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 1.7e-26 124.4 283 33.9
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 1.7e-26 124.4 284 34.5
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 1.7e-26 124.4 284 34.5
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 3.9e-26 123.2 284 34.2
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 4.7e-24 116.3 268 33.6
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 6.2e-24 115.9 307 30.9
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 8.0e-24 115.5 268 33.6
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 4.0e-23 113.2 313 32.6
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 6.8e-23 112.5 285 32.3
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 3.4e-22 110.2 305 32.1
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 6.4e-21 105.9 311 31.5
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 2.5e-17 94.0 254 31.5
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.5e-17 94.0 236 32.2
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 5.6e-17 92.8 135 44.4
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 3.1e-15 87.0 106 43.4
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 3.1e-15 87.0 106 43.4
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 3.0e-10 70.5 88 42.0
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 7.6e-06 55.8 54 46.3


User provided reference genes

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