Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 3.8e-176 621.3 300 100.0
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 2.1e-121 439.5 299 69.6
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 4.6e-121 438.3 289 70.2
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 1.0e-120 437.2 287 71.8
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 1.3e-120 436.8 297 68.7
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 3.9e-120 435.3 283 71.7
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 7.4e-119 431.0 296 67.6
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 1.6e-118 429.9 296 67.2
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 2.1e-118 429.5 282 71.3
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 6.9e-117 424.5 278 69.8
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 6.9e-117 424.5 280 72.9
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 6.9e-117 424.5 304 66.4
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 4.5e-116 421.8 279 69.9
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.0e-115 420.6 304 64.8
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 2.2e-115 419.5 299 66.9
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 4.9e-115 418.3 287 68.3
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 4.9e-115 418.3 280 70.4
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 8.4e-115 417.5 314 63.4
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 8.4e-115 417.5 282 69.9
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 1.1e-114 417.2 283 69.6
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 1.4e-114 416.8 295 66.8
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 2.5e-114 416.0 278 69.8
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 3.2e-114 415.6 282 68.8
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 4.2e-114 415.2 284 67.6
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 4.2e-114 415.2 272 70.6
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 5.5e-114 414.8 294 66.0
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 7.1e-114 414.5 274 70.1
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 9.3e-114 414.1 294 66.3
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 1.6e-113 413.3 280 68.2
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 2.1e-113 412.9 282 68.1
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 2.1e-113 412.9 286 67.5
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 2.7e-113 412.5 290 66.2
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 4.6e-113 411.8 298 64.8
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 6.0e-113 411.4 289 67.8
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 6.0e-113 411.4 279 68.1
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 7.9e-113 411.0 279 68.1
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 1.0e-112 410.6 280 68.9
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 1.3e-112 410.2 297 65.3
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 1.8e-112 409.8 279 69.5
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 3.9e-112 408.7 309 64.1
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 5.1e-112 408.3 294 66.0
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 8.7e-112 407.5 279 67.7
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 2.5e-111 406.0 308 63.3
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 3.3e-111 405.6 292 64.7
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 3.3e-111 405.6 291 64.9
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 5.7e-111 404.8 308 63.6
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 5.7e-111 404.8 278 68.7
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 7.4e-111 404.4 290 65.9
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 7.4e-111 404.4 281 67.3
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 7.4e-111 404.4 287 67.9
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 7.4e-111 404.4 282 66.7
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 1.6e-110 403.3 319 61.1
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 1.6e-110 403.3 289 67.1
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 3.7e-110 402.1 293 66.9
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 4.8e-110 401.7 271 68.3
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 6.3e-110 401.4 280 68.9
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 8.2e-110 401.0 290 64.5
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 8.2e-110 401.0 285 65.6
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 8.2e-110 401.0 279 66.7
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 1.1e-109 400.6 280 68.6
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 1.8e-109 399.8 274 68.2
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 3.1e-109 399.1 304 65.5
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 3.1e-109 399.1 277 68.2
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 5.3e-109 398.3 273 69.2
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 1.2e-108 397.1 299 65.6
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 1.5e-108 396.7 300 65.3
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 2.0e-108 396.4 278 69.1
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 2.6e-108 396.0 298 63.1
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 3.4e-108 395.6 294 64.3
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 2.9e-107 392.5 280 67.5
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 7.9e-105 384.4 272 68.4
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 2.3e-104 382.9 309 59.9
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 3.0e-104 382.5 311 61.1
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 3.9e-104 382.1 274 65.7
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 4.8e-102 375.2 309 60.8
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 1.7e-99 366.7 381 50.7
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 8.5e-99 364.4 270 65.2
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 9.4e-98 360.9 289 61.2
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 1.4e-96 357.1 284 59.9
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 1.1e-95 354.0 292 57.5
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 7.4e-95 351.3 293 59.4
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 1.1e-93 347.4 293 57.3
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 3.4e-92 342.4 298 55.0
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 1.4e-88 330.5 248 65.3
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 9.7e-87 324.3 321 53.3
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 3.5e-84 315.8 288 53.8
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 4.2e-82 308.9 218 70.2
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 6.3e-78 295.0 177 78.5
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 2.3e-72 276.6 165 77.0
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 4.0e-72 275.8 169 74.6
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 2.0e-68 263.5 175 70.9
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 4.5e-68 262.3 296 45.3
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 5.9e-68 261.9 176 69.9
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 1.3e-67 260.8 275 45.5
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 3.2e-66 256.1 175 66.3
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 4.2e-66 255.8 162 74.1
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 3.0e-64 249.6 173 64.7
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 7.0e-61 238.4 250 52.8
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 5.0e-59 232.3 287 42.9
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 4.1e-53 212.6 159 61.6
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 7.3e-50 201.8 131 72.5
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 8.9e-48 194.9 133 68.4
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.1e-32 144.8 276 35.5
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 5.2e-32 142.5 333 31.2
unitig_26.g8846 Utricularia gibba HOM05D006927 ORTHO05D009065 7.6e-31 138.7 72 76.4
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 2.7e-28 130.2 324 29.3
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 1.7e-27 127.5 81 70.4
SEGI_38351 Sequoiadendron giganteum HOM05D006927 ORTHO05D009065 1.2e-25 121.3 69 73.9
Thecc.05G234900 Theobroma cacao HOM05D006927 ORTHO05D009065 2.0e-23 114.0 59 78.0
BcaB08g36753 Brassica carinata HOM05D006927 ORTHO05D009065 7.6e-23 112.1 135 44.4
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 5.6e-18 95.9 151 39.7
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 6.4e-14 82.4 227 26.0
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 5.4e-13 79.3 156 37.2
CBR_g4745 Chara braunii HOM05D000019 ORTHO05D000002 6.2e-09 65.9 68 42.6
MCO12G090 Micromonas commoda HOM05D006927 ORTHO05D049054 1.1e-08 65.1 337 23.1
C09p59490 Brassica napus HOM05D000005 ORTHO05D040849 9.9e-07 58.5 153 28.8


User provided reference genes

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