Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0568G088 Amborella trichopoda HOM05D004254 ORTHO05D005184 2.3e-49 198.7 112 100.0
ATR1177G001 Amborella trichopoda HOM05D004254 ORTHO05D005184 3.8e-28 128.3 80 83.8
ATR0629G095 Amborella trichopoda HOM05D004254 ORTHO05D005184 1.8e-14 82.8 68 73.5
ATR0283G001 Amborella trichopoda HOM05D004254 ORTHO05D005184 6.5e-12 74.3 68 67.6
ATR1102G008 Amborella trichopoda HOM05D004254 ORTHO05D005184 4.7e-10 68.2 54 66.7
Aqoxy3G00045 Aquilegia oxysepala HOM05D004254 ORTHO05D005184 2.2e-07 59.3 54 57.4
MBI12_g17290_MAGBIO Magnolia biondii HOM05D004254 ORTHO05D005184 4.8e-07 58.2 54 55.6
GSVIVG01008461001 Vitis vinifera HOM05D004254 ORTHO05D005184 6.3e-07 57.8 58 53.4
PSO017G0085 Papaver somniferum HOM05D004254 ORTHO05D005184 1.1e-06 57.0 54 51.9
PSO478G1825 Papaver somniferum HOM05D004254 ORTHO05D005184 1.1e-06 57.0 54 51.9
Thecc.03G057600 Theobroma cacao HOM05D004254 ORTHO05D005184 1.1e-06 57.0 54 55.6
CSS0013925 Camellia sinensis var. sinensis HOM05D004254 ORTHO05D005184 1.4e-06 56.6 54 55.6
PGR083G1460 Punica granatum HOM05D004254 ORTHO05D005184 1.8e-06 56.2 54 55.6
HanXRQChr17g0559181 Helianthus annuus HOM05D004254 ORTHO05D005184 3.1e-06 55.5 54 55.6
MD14G1237000 Malus domestica HOM05D004254 ORTHO05D005184 3.1e-06 55.5 54 53.7
Actinidia12362 Actinidia chinensis HOM05D004254 ORTHO05D005184 4.1e-06 55.1 54 53.7
CAN.G843.50 Capsicum annuum HOM05D004254 ORTHO05D005184 4.1e-06 55.1 54 53.7
FAN08G2057 Fragaria x ananassa HOM05D004254 ORTHO05D005184 4.1e-06 55.1 85 36.5
Peaxi162Scf00314g00334 Petunia axillaris HOM05D004254 ORTHO05D005184 4.1e-06 55.1 54 53.7
Prupe.5G234300 Prunus persica HOM05D004254 ORTHO05D005184 4.1e-06 55.1 54 53.7
Solyc03g118640.3 Solanum lycopersicum HOM05D004254 ORTHO05D005184 4.1e-06 55.1 54 53.7
Sopen03g037600 Solanum pennellii HOM05D004254 ORTHO05D005184 4.1e-06 55.1 54 53.7
Atru.chr9.1674 Acer truncatum HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 53.7
ECA233G1972 Erigeron canadensis HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 51.9
Gohir.A03G092900 Gossypium hirsutum HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 51.9
Potri.015G037000 Populus trichocarpa HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 53.7
Sabra15G0030400 Salix brachista HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 53.7
Sabra15G0030600 Salix brachista HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 53.7
Sabra15G0031800 Salix brachista HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 53.7
Sabra15G0032200 Salix brachista HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 53.7
Sabra15G0032700 Salix brachista HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 53.7
Sabra15G0036000 Salix brachista HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 53.7
Sabra15G0059400 Salix brachista HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 53.7
SalBow7G0492 Salvia bowleyana HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 50.0
Zm00001eb280650 Zea mays HOM05D004254 ORTHO05D005184 5.4e-06 54.7 54 51.9
CANSAT21G0981 Cannabis sativa HOM05D004254 ORTHO05D005184 7.0e-06 54.3 54 51.9
Eucgr.B00991 Eucalyptus grandis HOM05D004254 ORTHO05D005184 7.0e-06 54.3 54 57.4
Lj2g0021015 Lotus japonicus HOM05D004254 ORTHO05D005184 7.0e-06 54.3 54 51.9
Rhsim08G0126700 Rhododendron simsii HOM05D004254 ORTHO05D005184 7.0e-06 54.3 54 55.6
TAR629G2841 Trochodendron aralioides HOM05D004254 ORTHO05D005184 7.0e-06 54.3 54 51.9
HPP92_023491 Vanilla planifolia HOM05D004254 ORTHO05D005184 7.0e-06 54.3 55 49.1
arahy.Tifrunner.gnm1.ann1.FFN37F Arachis hypogaea HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 51.9
arahy.Tifrunner.gnm1.ann1.QLLT1A Arachis hypogaea HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 51.9
Cpa.g.sc3.389 Carica papaya HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 51.9
Duzib084G0705 Durio zibethinus HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 51.9
FAN04G2545 Fragaria x ananassa HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 50.0
FAN13G1575 Fragaria x ananassa HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 50.0
Glyma.07G103000 Glycine max HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 51.9
Lalb_Chr14g0370611 Lupinus albus HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 51.9
Manes.06G005200 Manihot esculenta HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 53.7
RcHm_v2.0_Chr7g0178241 Rosa chinensis HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 50.0
VMungo0464G0766 Vigna mungo HOM05D004254 ORTHO05D005184 9.1e-06 53.9 54 51.9


User provided reference genes

Program Settings