Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0568G064 Amborella trichopoda HOM05D002646 ORTHO05D002782 5.9e-92 340.9 176 100.0
ATR0568G218 Amborella trichopoda HOM05D002646 ORTHO05D002782 8.9e-56 220.7 167 73.1
Prupe.6G124500 Prunus persica HOM05D002646 ORTHO05D002782 2.4e-24 116.3 173 45.7
Peaxi162Scf00258g00024 Petunia axillaris HOM05D002646 ORTHO05D002782 6.9e-24 114.8 166 42.2
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 6.9e-24 114.8 167 41.9
Cc10_g02720 Coffea canephora HOM05D002646 ORTHO05D002782 5.8e-23 111.7 121 47.9
MD03G1139500 Malus domestica HOM05D002646 ORTHO05D002782 7.6e-23 111.3 170 44.1
Nn7g35815 Nelumbo nucifera HOM05D002646 ORTHO05D002782 7.6e-23 111.3 156 41.7
TWI36G1083 Tripterygium wilfordii HOM05D002646 ORTHO05D002782 1.7e-22 110.2 167 43.1
COL.COLO4_26294 Corchorus olitorius HOM05D002646 ORTHO05D002782 2.9e-22 109.4 168 41.1
Medtr1g022355 Medicago truncatula HOM05D002646 ORTHO05D002782 2.9e-22 109.4 167 41.3
MBI16_g07737_MAGBIO Magnolia biondii HOM05D002646 ORTHO05D002782 3.8e-22 109.0 170 40.0
VMungo0647G1092 Vigna mungo HOM05D002646 ORTHO05D002782 3.8e-22 109.0 122 50.8
Duzib041G0261 Durio zibethinus HOM05D002646 ORTHO05D002782 4.9e-22 108.6 131 47.3
Oeu007022.1 Olea europaea HOM05D002646 ORTHO05D002782 4.9e-22 108.6 166 40.4
Peaxi162Scf00303g00042 Petunia axillaris HOM05D002646 ORTHO05D002782 6.4e-22 108.2 166 39.2
Actinidia15339 Actinidia chinensis HOM05D002646 ORTHO05D002782 1.1e-21 107.5 124 48.4
Glyma.17G251300 Glycine max HOM05D002646 ORTHO05D002782 1.1e-21 107.5 109 53.2
MBI17_g36957_MAGBIO Magnolia biondii HOM05D002646 ORTHO05D002782 1.1e-21 107.5 170 40.0
Nitab4.5_0000017g0180 Nicotiana tabacum HOM05D002646 ORTHO05D002782 1.1e-21 107.5 167 39.5
Oeu063762.1 Olea europaea HOM05D002646 ORTHO05D002782 1.1e-21 107.5 137 44.5
RcHm_v2.0_Chr7g0207751 Rosa chinensis HOM05D002646 ORTHO05D002782 1.1e-21 107.5 124 49.2
TAR626G1064 Trochodendron aralioides HOM05D002646 ORTHO05D002782 1.1e-21 107.5 168 42.3
Nitab4.5_0004768g0020 Nicotiana tabacum HOM05D002646 ORTHO05D002782 1.4e-21 107.1 167 39.5
Phvul.001G013700 Phaseolus vulgaris HOM05D002646 ORTHO05D002782 1.4e-21 107.1 130 47.7
CANSAT25G1404 Cannabis sativa HOM05D002646 ORTHO05D002782 1.9e-21 106.7 170 42.4
Glyma.14G073700 Glycine max HOM05D002646 ORTHO05D002782 1.9e-21 106.7 107 52.3
Manes.05G158200 Manihot esculenta HOM05D002646 ORTHO05D002782 1.9e-21 106.7 92 57.6
QL02p008978 Quercus lobata HOM05D002646 ORTHO05D002782 1.9e-21 106.7 173 42.2
Thecc.08G028900 Theobroma cacao HOM05D002646 ORTHO05D002782 1.9e-21 106.7 167 41.3
Ciclev10000434m.g Citrus clementina HOM05D002646 ORTHO05D002782 2.4e-21 106.3 172 40.1
Lj5g0008895 Lotus japonicus HOM05D002646 ORTHO05D002782 4.2e-21 105.5 125 47.2
Atru.chr13.450 Acer truncatum HOM05D002646 ORTHO05D002782 7.1e-21 104.8 169 43.2
Dinv36096 Davidia involucrata HOM05D002646 ORTHO05D002782 7.1e-21 104.8 170 40.6
FAN02G0761 Fragaria x ananassa HOM05D002646 ORTHO05D002782 7.1e-21 104.8 150 43.3
Potri.005G228200 Populus trichocarpa HOM05D002646 ORTHO05D002782 2.7e-20 102.8 142 39.4
GSVIVG01009725001 Vitis vinifera HOM05D002646 ORTHO05D002782 3.5e-20 102.4 133 44.4
arahy.Tifrunner.gnm1.ann1.GFJ2Z4 Arachis hypogaea HOM05D002646 ORTHO05D002782 4.6e-20 102.1 115 48.7
arahy.Tifrunner.gnm1.ann1.RWN5MT Arachis hypogaea HOM05D002646 ORTHO05D002782 4.6e-20 102.1 115 48.7
ECA246G2606 Erigeron canadensis HOM05D002646 ORTHO05D002782 4.6e-20 102.1 167 38.3
FAN05G0303 Fragaria x ananassa HOM05D002646 ORTHO05D002782 6.0e-20 101.7 153 43.8
Lalb_Chr14g0369361 Lupinus albus HOM05D002646 ORTHO05D002782 6.0e-20 101.7 166 38.0
TPR.G20158 Trifolium pratense HOM05D002646 ORTHO05D002782 7.8e-20 101.3 148 41.2
Sabra05G0176100 Salix brachista HOM05D002646 ORTHO05D002782 1.3e-19 100.5 169 37.3
SGA_v2.0_scaffold201G41411 Striga asiatica HOM05D002646 ORTHO05D002782 1.3e-19 100.5 169 39.6
CARHR020090 Cardamine hirsuta HOM05D002646 ORTHO05D002782 1.7e-19 100.1 166 36.7
FvH4_6g24430 Fragaria vesca HOM05D002646 ORTHO05D002782 1.7e-19 100.1 152 42.8
Gohir.D06G005550 Gossypium hirsutum HOM05D002646 ORTHO05D002782 2.3e-19 99.8 120 45.0
Gorai.010G009700 Gossypium raimondii HOM05D002646 ORTHO05D002782 2.3e-19 99.8 120 45.0
Sopen07g013020 Solanum pennellii HOM05D002646 ORTHO05D002782 2.3e-19 99.8 166 37.3
Sopen07g013050 Solanum pennellii HOM05D002646 ORTHO05D002782 2.3e-19 99.8 166 37.3
Thhalv10006936m.g Eutrema salsugineum HOM05D002646 ORTHO05D002782 3.9e-19 99.0 105 46.7
SHI08146 Sapria himalayana HOM05D002646 ORTHO05D002782 3.9e-19 99.0 108 45.4
Ca_13365_v3 Cicer arietinum L. HOM05D002646 ORTHO05D002782 5.1e-19 98.6 114 48.2
FAN09G1605 Fragaria x ananassa HOM05D002646 ORTHO05D002782 5.1e-19 98.6 152 42.8
Solyc07g025210.2 Solanum lycopersicum HOM05D002646 ORTHO05D002782 5.1e-19 98.6 166 37.3
Lsat_1_v5_gn_5_28001 Lactuca sativa HOM05D002646 ORTHO05D002782 6.6e-19 98.2 168 36.9
CSS0033317 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 8.7e-19 97.8 105 49.5
CSS0043279 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 8.7e-19 97.8 105 49.5
DCAR_019535 Daucus carota HOM05D002646 ORTHO05D002782 8.7e-19 97.8 150 41.3
Migut.C00748 Erythranthe guttata HOM05D002646 ORTHO05D002782 8.7e-19 97.8 119 44.5
FAN14G1091 Fragaria x ananassa HOM05D002646 ORTHO05D002782 8.7e-19 97.8 152 42.1
PGSC0003DMG400005374 Solanum tuberosum HOM05D002646 ORTHO05D002782 8.7e-19 97.8 169 36.7
AT1G19520 Arabidopsis thaliana HOM05D002646 ORTHO05D002782 1.1e-18 97.4 121 41.3
BcaB07g31981 Brassica carinata HOM05D002646 ORTHO05D002782 1.5e-18 97.1 96 45.8
Carub.0001s1909 Capsella rubella HOM05D002646 ORTHO05D002782 1.5e-18 97.1 167 35.3
Rhsim06G0032100 Rhododendron simsii HOM05D002646 ORTHO05D002782 1.9e-18 96.7 167 37.7
AL1G32270 Arabidopsis lyrata HOM05D002646 ORTHO05D002782 2.5e-18 96.3 168 35.7
Aqoxy2G03652 Aquilegia oxysepala HOM05D002646 ORTHO05D002782 4.3e-18 95.5 172 40.1
MSTRG.25182 Avicennia marina HOM05D002646 ORTHO05D002782 4.3e-18 95.5 167 37.7
CSS0011651 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 4.3e-18 95.5 127 44.9
CAN.G424.59 Capsicum annuum HOM05D002646 ORTHO05D002782 4.3e-18 95.5 148 39.2
Sc02g0005990 Simmondsia chinensis HOM05D002646 ORTHO05D002782 5.6e-18 95.1 107 48.6
Gohir.A06G009600 Gossypium hirsutum HOM05D002646 ORTHO05D002782 7.3e-18 94.7 168 38.1
PSO017G2345 Papaver somniferum HOM05D002646 ORTHO05D002782 1.3e-17 94.0 154 36.4
PSO675G2317 Papaver somniferum HOM05D002646 ORTHO05D002782 1.3e-17 94.0 154 35.7
Psat6g008080 Pisum sativum HOM05D002646 ORTHO05D002782 1.3e-17 94.0 155 40.6
Sed0008809 Sechium edule HOM05D002646 ORTHO05D002782 1.3e-17 94.0 117 41.9
Haze_17945 Corylus avellana HOM05D002646 ORTHO05D002782 2.1e-17 93.2 152 39.5
CiPaw.16G059900 Carya illinoinensis HOM05D002646 ORTHO05D002782 2.8e-17 92.8 167 38.3
PGR083G1089 Punica granatum HOM05D002646 ORTHO05D002782 3.6e-17 92.4 137 41.6
Cfa018170 Carpinus fangiana HOM05D002646 ORTHO05D002782 4.8e-17 92.0 152 39.5
Cpa.g.sc33.173 Carica papaya HOM05D002646 ORTHO05D002782 1.1e-16 90.9 168 37.5
MELO3C010957.2 Cucumis melo HOM05D002646 ORTHO05D002782 1.4e-16 90.5 168 36.9
ClCG08G014890 Citrullus lanatus HOM05D002646 ORTHO05D002782 4.0e-16 89.0 167 36.5
HanXRQChr03g0069631 Helianthus annuus HOM05D002646 ORTHO05D002782 5.3e-16 88.6 87 49.4
BcaC05g25840 Brassica carinata HOM05D002646 ORTHO05D002782 6.9e-16 88.2 148 35.1
BolC5t30509H Brassica oleracea HOM05D002646 ORTHO05D002782 6.9e-16 88.2 148 35.1
C05p18020 Brassica napus HOM05D002646 ORTHO05D002782 9.0e-16 87.8 148 35.1
BraA06t24679Z Brassica rapa HOM05D002646 ORTHO05D002782 1.5e-15 87.0 87 47.1
Ah.10g033130 Amaranthus hybridus HOM05D002646 ORTHO05D002782 2.6e-15 86.3 104 45.2
CsaV3_2G028870 Cucumis sativus L. HOM05D002646 ORTHO05D002782 2.6e-15 86.3 149 36.9
unitig_46.g18436 Utricularia gibba HOM05D002509 ORTHO05D002758 3.4e-15 85.9 162 35.8
Aa31LG7G4170 Aethionema arabicum HOM05D002646 ORTHO05D002782 4.5e-15 85.5 167 32.3
A06p15700 Brassica napus HOM05D002646 ORTHO05D002782 4.5e-15 85.5 113 39.8
Lj4A37G90 Lonicera japonica HOM05D002646 ORTHO05D002782 7.6e-15 84.7 122 41.8
HPP92_021825 Vanilla planifolia HOM05D002646 ORTHO05D002782 2.2e-14 83.2 100 41.0
Os02g0611400 Oryza sativa ssp. japonica HOM05D002646 ORTHO05D002782 8.4e-14 81.3 89 44.9
Potri.002G034900 Populus trichocarpa HOM05D002646 ORTHO05D002782 5.4e-13 78.6 148 37.2
Zm00001eb246850 Zea mays HOM05D002646 ORTHO05D002782 3.5e-12 75.9 78 46.2
CSS0007142 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 5.1e-11 72.0 132 39.4
vmacro21650 Vaccinium macrocarpon HOM05D002646 ORTHO05D002782 5.1e-11 72.0 168 35.1
SEGI_28365 Sequoiadendron giganteum HOM05D002646 ORTHO05D002782 4.3e-10 68.9 98 38.8
Eucgr.F01577 Eucalyptus grandis HOM05D002646 ORTHO05D002782 5.6e-10 68.6 120 40.0
CSS0021407 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 3.7e-09 65.9 128 39.1
MD11G1162300 Malus domestica HOM05D002646 ORTHO05D002782 3.7e-09 65.9 122 41.8
THA.LOC104813824 Tarenaya hassleriana HOM05D002646 ORTHO05D002782 1.1e-08 64.3 119 36.1
AUR62043098 Chenopodium quinoa HOM05D002646 ORTHO05D002782 3.1e-08 62.8 96 38.5
Sp1g17390 Schrenkiella parvula HOM05D002646 ORTHO05D002782 3.1e-08 62.8 107 34.6
CDE05G0187 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 1.5e-07 60.5 59 50.8
AUR62025546 Chenopodium quinoa HOM05D002646 ORTHO05D002782 2.0e-07 60.1 173 31.8
CDE11G1167 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 2.6e-07 59.7 87 42.5
EL10Ac4g08951 Beta vulgaris HOM05D002646 ORTHO05D002782 5.8e-07 58.5 118 40.7
Hund06823 Selenicereus undatus HOM05D002646 ORTHO05D002782 1.3e-06 57.4 51 52.9


User provided reference genes

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