Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 9.0e-192 673.7 333 100.0
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 1.4e-136 490.3 330 73.9
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 7.3e-133 478.0 333 71.5
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 7.5e-130 468.0 333 69.7
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 2.4e-128 463.0 337 70.6
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.2e-127 460.7 331 71.3
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 2.7e-127 459.5 328 72.6
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 4.6e-127 458.8 340 68.2
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 1.3e-126 457.2 332 69.9
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 1.7e-126 456.8 330 71.2
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 5.1e-126 455.3 332 71.4
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 5.1e-126 455.3 331 71.0
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 1.9e-125 453.4 330 70.6
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 1.9e-125 453.4 335 69.0
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 2.5e-125 453.0 336 69.0
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 4.3e-125 452.2 332 68.4
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 9.5e-125 451.1 333 71.2
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 9.5e-125 451.1 333 71.2
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 2.1e-124 449.9 334 67.7
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 2.1e-124 449.9 333 70.9
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 2.1e-124 449.9 332 70.2
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 2.8e-124 449.5 329 70.5
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 8.1e-124 448.0 333 69.4
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 8.1e-124 448.0 334 67.4
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 1.4e-123 447.2 330 69.1
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.8e-123 446.8 333 69.4
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 4.0e-123 445.7 333 69.4
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 5.2e-123 445.3 332 69.6
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 6.8e-123 444.9 335 68.7
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 8.9e-123 444.5 332 69.3
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 1.2e-122 444.1 338 68.6
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 1.5e-122 443.7 333 67.3
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 2.0e-122 443.4 345 67.5
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 2.0e-122 443.4 333 67.3
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 2.6e-122 443.0 338 69.5
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 7.6e-122 441.4 332 70.5
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 9.9e-122 441.0 337 67.7
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 9.9e-122 441.0 341 65.7
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 2.2e-121 439.9 330 69.4
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 4.9e-121 438.7 336 69.0
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 6.4e-121 438.3 334 70.7
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 8.4e-121 438.0 335 68.7
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 1.4e-120 437.2 336 69.9
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.9e-120 436.8 320 70.0
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 2.4e-120 436.4 322 70.2
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 2.4e-120 436.4 322 69.9
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 3.2e-120 436.0 335 67.2
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 4.1e-120 435.6 330 68.5
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 4.1e-120 435.6 332 67.5
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 5.4e-120 435.3 330 66.4
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 7.1e-120 434.9 319 70.2
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 7.1e-120 434.9 332 68.7
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 1.2e-119 434.1 328 69.2
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 2.7e-119 433.0 336 64.6
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 2.7e-119 433.0 326 68.7
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 2.7e-119 433.0 327 70.3
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 4.6e-119 432.2 332 69.9
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 6.0e-119 431.8 327 69.7
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 6.0e-119 431.8 368 63.6
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 7.8e-119 431.4 323 68.4
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 8.6e-118 427.9 328 67.1
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 8.6e-118 427.9 340 67.4
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 1.9e-117 426.8 334 68.6
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 1.9e-117 426.8 344 65.7
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 4.3e-117 425.6 311 71.1
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 4.7e-116 422.2 352 65.6
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 1.8e-115 420.2 332 65.4
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 2.4e-115 419.9 328 65.2
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.4e-115 419.9 346 66.2
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 2.4e-115 419.9 336 64.3
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 4.0e-115 419.1 328 65.2
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 4.0e-115 419.1 328 65.2
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 5.2e-115 418.7 328 65.9
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 1.2e-114 417.5 323 65.9
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 1.2e-114 417.5 335 64.5
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 1.5e-114 417.2 331 65.3
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 1.5e-114 417.2 333 66.4
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 4.4e-114 415.6 329 66.0
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 1.3e-113 414.1 333 64.9
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 3.8e-113 412.5 321 67.0
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 3.8e-113 412.5 333 64.6
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.9e-112 410.2 350 65.1
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 5.6e-109 398.7 409 54.5
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 7.3e-109 398.3 332 64.8
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 4.0e-107 392.5 328 62.5
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 2.6e-106 389.8 336 61.9
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 1.9e-104 383.6 321 62.3
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.4e-99 367.5 328 58.8
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 4.5e-98 362.5 318 59.1
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 2.9e-97 359.8 573 41.0
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 5.5e-96 355.5 273 68.5
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 1.8e-94 350.5 275 66.2
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 1.4e-91 340.9 301 57.5
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 6.5e-89 332.0 294 60.9
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 2.3e-86 323.6 250 68.0
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 1.8e-78 297.4 239 64.0
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 3.7e-76 289.7 237 62.0
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 3.2e-64 250.0 322 47.2
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 5.5e-64 249.2 206 65.5
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.6e-61 240.4 202 65.8
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 1.8e-54 217.6 142 72.5
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 3.2e-48 196.8 204 53.9
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 6.1e-47 192.6 170 59.4
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 1.8e-38 164.5 280 35.4
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 3.4e-29 133.7 210 41.9
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 2.4e-27 127.5 99 69.7
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 1.2e-26 125.2 87 75.9
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 2.7e-26 124.0 75 81.3
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 5.9e-26 122.9 75 81.3
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 9.5e-24 115.5 70 77.1
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 1.1e-19 102.1 130 49.2
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.7e-17 94.7 63 74.6
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 8.6e-17 92.4 63 73.0
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.1e-16 92.0 54 77.8
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 7.3e-16 89.4 63 66.7
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 2.3e-14 84.3 48 75.0
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 4.0e-14 83.6 113 38.1
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 5.2e-14 83.2 63 68.3
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 5.2e-14 83.2 48 75.0
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 5.8e-13 79.7 67 65.7
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 4.1e-11 73.6 43 81.4
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 7.8e-10 69.3 39 79.5


User provided reference genes

Program Settings