Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G527 Amborella trichopoda HOM05D005097 ORTHO05D006186 4.0e-79 298.1 163 100.0
TAR629G2181 Trochodendron aralioides HOM05D005097 ORTHO05D006186 4.7e-19 98.6 174 44.8
Hma1.2p1_0598F.1_g186730 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 1.5e-17 93.6 177 41.8
Dinv34170 Davidia involucrata HOM05D005097 ORTHO05D006186 9.8e-17 90.9 177 39.0
MBI05_g00383_MAGBIO Magnolia biondii HOM05D005097 ORTHO05D006186 2.9e-16 89.4 172 41.3
Gohir.D13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 4.9e-16 88.6 180 36.7
Gorai.013G084000 Gossypium raimondii HOM05D005097 ORTHO05D006186 4.9e-16 88.6 180 36.7
Nn4g23108 Nelumbo nucifera HOM05D005097 ORTHO05D006186 1.4e-15 87.0 174 38.5
Cfa009001 Carpinus fangiana HOM05D005097 ORTHO05D006186 7.0e-15 84.7 183 39.9
TAR371G0839 Trochodendron aralioides HOM05D005097 ORTHO05D006186 7.0e-15 84.7 170 42.4
Rhsim12G0061600 Rhododendron simsii HOM05D005097 ORTHO05D006186 2.0e-14 83.2 162 38.3
FAN17G3076 Fragaria x ananassa HOM05D005097 ORTHO05D006186 2.7e-14 82.8 176 39.2
TAR622G0694 Trochodendron aralioides HOM05D005097 ORTHO05D006186 6.0e-14 81.6 166 42.2
FAN07G0101 Fragaria x ananassa HOM05D005097 ORTHO05D006186 7.8e-14 81.3 176 38.6
Gohir.A03G099800 Gossypium hirsutum HOM05D005097 ORTHO05D006186 7.8e-14 81.3 175 37.1
Gohir.A13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 7.8e-14 81.3 182 36.8
COL.COLO4_22981 Corchorus olitorius HOM05D005097 ORTHO05D006186 1.0e-13 80.9 187 40.1
Cc11_g13240 Coffea canephora HOM05D005097 ORTHO05D006186 1.3e-13 80.5 172 37.8
Atru.chr11.1825 Acer truncatum HOM05D005097 ORTHO05D006186 3.0e-13 79.3 182 39.0
Prupe.1G272000 Prunus persica HOM05D005097 ORTHO05D006186 3.0e-13 79.3 190 35.8
Haze_12031 Corylus avellana HOM05D005097 ORTHO05D006186 3.9e-13 79.0 188 37.2
Gorai.005G140300 Gossypium raimondii HOM05D005097 ORTHO05D006186 3.9e-13 79.0 177 37.3
Gohir.D02G124700 Gossypium hirsutum HOM05D005097 ORTHO05D006186 6.6e-13 78.2 177 36.7
QL03p064734 Quercus lobata HOM05D005097 ORTHO05D006186 1.1e-12 77.4 198 36.4
CiPaw.06G083100 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.5e-12 77.0 190 36.8
Phvul.003G067200 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 1.9e-12 76.6 177 37.9
Duzib251G0564 Durio zibethinus HOM05D005097 ORTHO05D006186 4.3e-12 75.5 190 36.8
EL10Ac6g13179 Beta vulgaris HOM05D005097 ORTHO05D006186 5.6e-12 75.1 145 42.8
Aa31LG7G8220 Aethionema arabicum HOM05D005097 ORTHO05D006186 7.3e-12 74.7 144 48.6
Oeu054897.1 Olea europaea HOM05D005097 ORTHO05D006186 7.3e-12 74.7 189 39.7
Ciclev10032896m.g Citrus clementina HOM05D005097 ORTHO05D006186 1.2e-11 73.9 181 42.5
CSS0049826 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 1.6e-11 73.6 170 39.4
Hma1.2p1_0265F.1_g106660 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 1.6e-11 73.6 171 37.4
MD16G1075200 Malus domestica HOM05D005097 ORTHO05D006186 1.6e-11 73.6 148 41.2
Manes.05G099600 Manihot esculenta HOM05D005097 ORTHO05D006186 1.6e-11 73.6 179 36.3
RcHm_v2.0_Chr4g0440081 Rosa chinensis HOM05D005097 ORTHO05D006186 2.1e-11 73.2 185 35.1
MSTRG.7812 Avicennia marina HOM05D005097 ORTHO05D006186 3.6e-11 72.4 201 34.3
A08p27630 Brassica napus HOM05D005097 ORTHO05D006186 3.6e-11 72.4 166 36.1
BraA08t34700Z Brassica rapa HOM05D005097 ORTHO05D006186 3.6e-11 72.4 166 36.1
Cpa.g.c36484 Carica papaya HOM05D005097 ORTHO05D006186 3.6e-11 72.4 165 38.2
MSTRG.2351 Avicennia marina HOM05D005097 ORTHO05D006186 4.7e-11 72.0 152 37.5
FAN22G0952 Fragaria x ananassa HOM05D005097 ORTHO05D006186 4.7e-11 72.0 182 35.7
CiPaw.05G137400 Carya illinoinensis HOM05D005097 ORTHO05D006186 6.2e-11 71.6 191 37.2
Glyma.18G121900 Glycine max HOM05D005097 ORTHO05D006186 6.2e-11 71.6 188 34.0
Thecc.02G349700 Theobroma cacao HOM05D005097 ORTHO05D006186 6.2e-11 71.6 192 34.9
FAN12G0365 Fragaria x ananassa HOM05D005097 ORTHO05D006186 8.0e-11 71.2 183 37.2
Migut.E00105 Erythranthe guttata HOM05D005097 ORTHO05D006186 1.4e-10 70.5 190 38.4
Glyma.01G045200 Glycine max HOM05D005097 ORTHO05D006186 1.4e-10 70.5 179 34.1
VMungo0251G1975 Vigna mungo HOM05D005097 ORTHO05D006186 1.4e-10 70.5 155 40.0
MSTRG.13412 Avicennia marina HOM05D005097 ORTHO05D006186 1.8e-10 70.1 188 36.7
DCAR_007146 Daucus carota HOM05D005097 ORTHO05D006186 2.3e-10 69.7 142 35.9
Glyma.08G299000 Glycine max HOM05D005097 ORTHO05D006186 2.3e-10 69.7 187 34.8
Manes.01G187400 Manihot esculenta HOM05D005097 ORTHO05D006186 2.3e-10 69.7 193 33.7
CARHR025020 Cardamine hirsuta HOM05D005097 ORTHO05D006186 5.2e-10 68.6 171 33.3
Migut.L01312 Erythranthe guttata HOM05D005097 ORTHO05D006186 5.2e-10 68.6 182 36.8
Phvul.002G088000 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 5.2e-10 68.6 176 30.1
Lj2g0000799 Lotus japonicus HOM05D005097 ORTHO05D006186 6.8e-10 68.2 173 36.4
BcaB03g14754 Brassica carinata HOM05D005097 ORTHO05D006186 8.9e-10 67.8 176 32.4
Oeu027980.1 Olea europaea HOM05D005097 ORTHO05D006186 1.2e-09 67.4 179 37.4
Ca_04768_v3 Cicer arietinum L. HOM05D005097 ORTHO05D006186 1.5e-09 67.0 185 32.4
Sp1g21860 Schrenkiella parvula HOM05D005097 ORTHO05D006186 1.5e-09 67.0 158 34.2
SGA_v2.0_scaffold389G50580 Striga asiatica HOM05D005097 ORTHO05D006186 2.0e-09 66.6 166 33.1
BcaB05g24483 Brassica carinata HOM05D005097 ORTHO05D006186 2.6e-09 66.2 169 36.1
A07p31380 Brassica napus HOM05D005097 ORTHO05D006186 3.4e-09 65.9 179 36.3
C06p36640 Brassica napus HOM05D005097 ORTHO05D006186 3.4e-09 65.9 178 36.0
BraA07t30773Z Brassica rapa HOM05D005097 ORTHO05D006186 3.4e-09 65.9 179 36.3
PGR102G3149 Punica granatum HOM05D005097 ORTHO05D006186 3.4e-09 65.9 125 39.2
BcaC07g39258 Brassica carinata HOM05D005097 ORTHO05D006186 4.4e-09 65.5 170 36.5
C08p22680 Brassica napus HOM05D005097 ORTHO05D006186 4.4e-09 65.5 170 36.5
BolC8t49906H Brassica oleracea HOM05D005097 ORTHO05D006186 4.4e-09 65.5 170 36.5
VMungo1215G0414 Vigna mungo HOM05D005097 ORTHO05D006186 4.4e-09 65.5 168 31.5
Solyc05g007240.1 Solanum lycopersicum HOM05D005097 ORTHO05D006186 5.8e-09 65.1 170 32.4
BcaC08g45866 Brassica carinata HOM05D005097 ORTHO05D006186 7.5e-09 64.7 178 35.4
BolC6t38773H Brassica oleracea HOM05D005097 ORTHO05D006186 7.5e-09 64.7 178 35.4
CiPaw.05G214900 Carya illinoinensis HOM05D005097 ORTHO05D006186 7.5e-09 64.7 149 37.6
MD13G1074000 Malus domestica HOM05D005097 ORTHO05D006186 7.5e-09 64.7 141 39.0
SalBow2G3468 Salvia bowleyana HOM05D005097 ORTHO05D006186 7.5e-09 64.7 172 34.9
Sopen05g003200 Solanum pennellii HOM05D005097 ORTHO05D006186 7.5e-09 64.7 170 32.4
Ah.02g131220 Amaranthus hybridus HOM05D005097 ORTHO05D006186 9.8e-09 64.3 168 33.9
BcaB03g15503 Brassica carinata HOM05D005097 ORTHO05D006186 9.8e-09 64.3 177 35.6
SalBow2G0279 Salvia bowleyana HOM05D005097 ORTHO05D006186 9.8e-09 64.3 180 35.0
Ah.03g135230 Amaranthus hybridus HOM05D005097 ORTHO05D006186 1.3e-08 63.9 167 35.9
BcaC03g15115 Brassica carinata HOM05D005097 ORTHO05D006186 1.3e-08 63.9 170 34.7
BolC2t08749H Brassica oleracea HOM05D005097 ORTHO05D006186 1.3e-08 63.9 170 34.7
Eucgr.B03425 Eucalyptus grandis HOM05D005097 ORTHO05D006186 1.3e-08 63.9 183 33.3
AL2G28940 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 1.7e-08 63.5 143 35.7
BcaC08g46423 Brassica carinata HOM05D005097 ORTHO05D006186 1.7e-08 63.5 174 32.8
A07p36180 Brassica napus HOM05D005097 ORTHO05D006186 1.7e-08 63.5 171 34.5
BraA07t31193Z Brassica rapa HOM05D005097 ORTHO05D006186 1.7e-08 63.5 171 34.5
Eucgr.G02514 Eucalyptus grandis HOM05D005097 ORTHO05D006186 1.7e-08 63.5 161 37.9
Thhalv10019695m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 1.7e-08 63.5 150 35.3
PSO063G6767 Papaver somniferum HOM05D005097 ORTHO05D006186 1.7e-08 63.5 161 35.4
Psat2g121760 Pisum sativum HOM05D005097 ORTHO05D006186 1.7e-08 63.5 169 36.1
Sp5g24880 Schrenkiella parvula HOM05D005097 ORTHO05D006186 1.7e-08 63.5 162 32.7
BolC6t39429H Brassica oleracea HOM05D005097 ORTHO05D006186 2.2e-08 63.2 175 32.6
Aa31LG4G11040 Aethionema arabicum HOM05D005097 ORTHO05D006186 2.9e-08 62.8 81 45.7
MSTRG.689 Avicennia marina HOM05D005097 ORTHO05D006186 2.9e-08 62.8 197 33.5
A02p16130 Brassica napus HOM05D005097 ORTHO05D006186 2.9e-08 62.8 170 35.9
C06p43570 Brassica napus HOM05D005097 ORTHO05D006186 2.9e-08 62.8 174 33.3
BraA02t06672Z Brassica rapa HOM05D005097 ORTHO05D006186 2.9e-08 62.8 170 35.9
Eucgr.G02516 Eucalyptus grandis HOM05D005097 ORTHO05D006186 2.9e-08 62.8 170 40.0
Aqoxy3G03339 Aquilegia oxysepala HOM05D005097 ORTHO05D006186 3.7e-08 62.4 142 35.9
MELO3C012082.2 Cucumis melo HOM05D005097 ORTHO05D006186 3.7e-08 62.4 80 50.0
PSO832G2020 Papaver somniferum HOM05D005097 ORTHO05D006186 3.7e-08 62.4 157 35.0
PGSC0003DMG400023051 Solanum tuberosum HOM05D005097 ORTHO05D006186 3.7e-08 62.4 172 33.7
Nitab4.5_0002151g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 4.9e-08 62.0 163 36.8
ClCG05G024410 Citrullus lanatus HOM05D005097 ORTHO05D006186 6.4e-08 61.6 183 38.8
Nn3g17188 Nelumbo nucifera HOM05D005097 ORTHO05D006186 6.4e-08 61.6 178 39.9
Sed0019373 Sechium edule HOM05D005097 ORTHO05D006186 6.4e-08 61.6 162 36.4
THA.LOC104822110 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 8.3e-08 61.2 147 37.4
Lsat_1_v5_gn_3_52761 Lactuca sativa HOM05D005097 ORTHO05D006186 1.1e-07 60.8 183 32.8
Nitab4.5_0007561g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 1.1e-07 60.8 167 37.1
BcaB03g12015 Brassica carinata HOM05D005097 ORTHO05D006186 1.9e-07 60.1 137 38.7
Thhalv10008900m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 2.4e-07 59.7 172 33.7
Oeu045409.1 Olea europaea HOM05D005097 ORTHO05D006186 2.4e-07 59.7 196 31.6
DCAR_027404 Daucus carota HOM05D005097 ORTHO05D006186 3.2e-07 59.3 168 30.4
AT1G26920 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 4.1e-07 58.9 120 36.7
BcaC05g26373 Brassica carinata HOM05D005097 ORTHO05D006186 4.1e-07 58.9 142 33.8
BolC5t31142H Brassica oleracea HOM05D005097 ORTHO05D006186 4.1e-07 58.9 142 33.8
Actinidia07840 Actinidia chinensis HOM05D005097 ORTHO05D006186 5.4e-07 58.5 110 36.4
A09p40330 Brassica napus HOM05D005097 ORTHO05D006186 5.4e-07 58.5 142 33.8
BraA09t39531Z Brassica rapa HOM05D005097 ORTHO05D006186 5.4e-07 58.5 142 33.8
Carub.0002s1644 Capsella rubella HOM05D005097 ORTHO05D006186 5.4e-07 58.5 82 50.0
Oeu013625.1 Olea europaea HOM05D005097 ORTHO05D006186 5.4e-07 58.5 192 33.9
PGR119G1789 Punica granatum HOM05D005097 ORTHO05D006186 5.4e-07 58.5 78 47.4
CARHR062830 Cardamine hirsuta HOM05D005097 ORTHO05D006186 7.1e-07 58.2 79 48.1
AT1G69760 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 9.2e-07 57.8 82 46.3
Peaxi162Scf00541g00067 Petunia axillaris HOM05D005097 ORTHO05D006186 9.2e-07 57.8 175 31.4
Lsat_1_v5_gn_4_9981 Lactuca sativa HOM05D005097 ORTHO05D006186 1.2e-06 57.4 86 44.2
unitig_26.g10306 Utricularia gibba HOM05D005097 ORTHO05D006186 1.2e-06 57.4 154 30.5
C02p26790 Brassica napus HOM05D005097 ORTHO05D006186 1.6e-06 57.0 170 35.3
Dinv16629 Davidia involucrata HOM05D001598 ORTHO05D002757 1.6e-06 57.0 81 48.1
CSS0023945 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 2.1e-06 56.6 86 44.2
Carub.0001s2406 Capsella rubella HOM05D005097 ORTHO05D006186 2.7e-06 56.2 181 32.0
THA.LOC104822921 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 3.5e-06 55.8 148 34.5


User provided reference genes

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