Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 5.0e-111 404.4 202 100.0
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 4.4e-43 178.7 164 61.0
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 5.8e-43 178.3 205 49.8
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 2.9e-42 176.0 164 59.1
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 6.4e-42 174.9 164 56.1
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 4.2e-41 172.2 165 57.6
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 9.3e-41 171.0 164 57.3
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 1.6e-40 170.2 165 53.9
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 2.1e-40 169.9 164 56.7
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 2.7e-40 169.5 161 59.0
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 3.5e-40 169.1 164 58.5
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 3.5e-40 169.1 164 57.9
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 3.5e-40 169.1 164 56.7
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 3.5e-40 169.1 164 54.3
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 4.6e-40 168.7 105 78.1
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 4.6e-40 168.7 165 53.9
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 7.8e-40 167.9 205 48.8
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 1.0e-39 167.5 161 55.3
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 1.0e-39 167.5 165 56.4
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 1.3e-39 167.2 164 56.1
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 2.3e-39 166.4 164 56.1
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 2.3e-39 166.4 164 56.7
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 3.0e-39 166.0 161 56.5
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 3.0e-39 166.0 165 55.2
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.0e-39 166.0 164 55.5
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 3.9e-39 165.6 166 55.4
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 3.9e-39 165.6 164 56.7
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 3.9e-39 165.6 169 55.6
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 5.1e-39 165.2 164 56.7
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 5.1e-39 165.2 164 56.7
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 8.7e-39 164.5 167 55.1
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 1.5e-38 163.7 161 56.5
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.5e-38 163.7 164 54.9
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 1.5e-38 163.7 109 67.9
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 1.9e-38 163.3 161 55.3
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 2.5e-38 162.9 165 55.2
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 2.5e-38 162.9 164 54.3
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 3.3e-38 162.5 162 56.2
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 3.3e-38 162.5 161 55.3
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 3.3e-38 162.5 161 54.7
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 3.3e-38 162.5 164 52.4
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 3.3e-38 162.5 164 54.3
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 4.3e-38 162.2 209 48.8
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 4.3e-38 162.2 163 54.6
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 5.6e-38 161.8 161 55.3
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 7.3e-38 161.4 161 54.7
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 7.3e-38 161.4 161 55.9
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 7.3e-38 161.4 161 54.7
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 7.3e-38 161.4 204 46.6
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 7.3e-38 161.4 161 54.7
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 9.6e-38 161.0 201 47.8
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 9.6e-38 161.0 164 53.7
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 9.6e-38 161.0 164 55.5
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 9.6e-38 161.0 164 53.7
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 9.6e-38 161.0 164 53.7
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 1.6e-37 160.2 164 56.7
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 1.6e-37 160.2 165 51.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 2.1e-37 159.8 164 56.7
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 2.1e-37 159.8 164 56.7
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 2.1e-37 159.8 164 53.7
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 2.8e-37 159.5 161 54.7
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 2.8e-37 159.5 164 56.1
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 2.8e-37 159.5 164 56.7
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 3.6e-37 159.1 164 53.0
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 3.6e-37 159.1 164 56.1
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 3.6e-37 159.1 164 56.1
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.8e-37 158.7 164 53.7
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 6.2e-37 158.3 203 46.8
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.1e-36 157.5 167 54.5
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.1e-36 157.5 164 53.7
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.4e-36 157.1 143 59.4
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.8e-36 156.8 167 55.7
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 2.4e-36 156.4 164 53.0
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 3.1e-36 156.0 164 52.4
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 4.0e-36 155.6 169 52.1
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 4.0e-36 155.6 106 68.9
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 1.2e-35 154.1 161 52.8
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.5e-35 153.7 167 55.1
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 1.5e-35 153.7 106 64.2
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 2.0e-35 153.3 164 51.8
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 2.0e-35 153.3 164 53.0
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.6e-35 152.9 164 51.2
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 3.4e-35 152.5 164 52.4
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 5.8e-35 151.8 165 54.5
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 5.8e-35 151.8 210 43.3
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 7.6e-35 151.4 177 50.8
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 7.6e-35 151.4 164 53.0
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 7.6e-35 151.4 164 51.8
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 9.9e-35 151.0 99 73.7
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.7e-34 150.2 165 55.2
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 1.7e-34 150.2 164 53.7
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 2.2e-34 149.8 203 45.3
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 2.9e-34 149.4 204 45.6
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 6.4e-34 148.3 103 68.9
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.4e-33 147.1 148 52.0
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.4e-33 147.1 161 49.7
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 1.9e-33 146.7 105 69.5
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 4.2e-33 145.6 108 63.9
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 9.3e-33 144.4 231 41.6
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 5.6e-30 135.2 150 54.7
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 2.1e-29 133.3 85 74.1
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.4e-28 129.8 142 47.9
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 1.7e-26 123.6 125 50.4
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 1.1e-25 120.9 157 47.8
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 5.6e-22 108.6 152 41.4
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.1e-20 104.4 164 42.1
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 3.4e-19 99.4 164 41.5
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.9e-17 93.6 110 50.0
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 9.3e-17 91.3 100 46.0
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 1.2e-16 90.9 108 40.7
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 2.1e-16 90.1 164 38.4
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 5.7e-14 82.0 110 49.1
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 9.0e-12 74.7 113 45.1
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 2.9e-10 69.7 85 44.7
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.4e-09 67.4 53 56.6
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 1.9e-09 67.0 54 63.0
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 1.9e-09 67.0 54 63.0
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 1.9e-09 67.0 85 42.4
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 6.1e-08 62.0 110 39.1


User provided reference genes

Program Settings