Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 1.2e-124 449.9 240 100.0
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 7.6e-66 254.6 250 62.8
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 5.1e-62 241.9 248 59.3
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 2.1e-60 236.5 252 57.1
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 8.1e-60 234.6 253 58.1
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 3.1e-59 232.6 246 58.1
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 6.9e-59 231.5 254 58.3
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 1.2e-58 230.7 249 59.0
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 2.0e-58 229.9 252 55.6
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 5.8e-58 228.4 253 55.3
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 1.3e-57 227.3 249 57.8
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 1.3e-57 227.3 193 69.4
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 2.2e-57 226.5 250 57.2
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 8.4e-57 224.6 205 62.4
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.1e-56 224.2 248 56.9
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 1.9e-56 223.4 259 56.0
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 3.2e-56 222.6 261 54.8
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 3.2e-56 222.6 252 56.7
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 3.2e-56 222.6 252 56.3
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 9.3e-56 221.1 257 56.4
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 9.3e-56 221.1 254 55.9
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 1.2e-55 220.7 253 55.7
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 3.5e-55 219.2 253 54.9
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 4.6e-55 218.8 247 57.5
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 7.8e-55 218.0 245 56.3
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 1.3e-54 217.2 244 57.0
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 3.9e-54 215.7 258 56.2
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 5.1e-54 215.3 257 54.9
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 6.6e-54 214.9 257 54.1
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 8.7e-54 214.5 255 55.7
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 8.7e-54 214.5 261 52.1
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 1.1e-53 214.2 272 54.8
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 1.1e-53 214.2 257 55.3
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 1.1e-53 214.2 253 56.1
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.9e-53 213.4 200 63.0
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 3.3e-53 212.6 254 55.5
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 5.6e-53 211.8 247 55.9
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 7.3e-53 211.5 256 52.3
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 7.3e-53 211.5 261 52.5
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 1.3e-52 210.7 252 55.6
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.6e-52 210.3 254 55.5
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 1.6e-52 210.3 254 55.5
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 2.1e-52 209.9 251 55.0
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 2.1e-52 209.9 256 54.7
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 3.6e-52 209.1 256 52.3
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 4.8e-52 208.8 253 54.5
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 6.2e-52 208.4 257 54.1
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 8.1e-52 208.0 251 55.0
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 1.4e-51 207.2 244 52.5
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.8e-51 206.8 254 52.4
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 9.0e-51 204.5 244 54.9
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 9.0e-51 204.5 251 51.8
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 1.5e-50 203.8 189 60.8
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 3.4e-50 202.6 249 54.2
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 5.8e-50 201.8 249 53.4
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 7.6e-50 201.4 249 53.8
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 7.6e-50 201.4 253 51.0
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 9.9e-50 201.1 249 51.8
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 1.3e-49 200.7 241 52.7
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 1.3e-49 200.7 292 48.3
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 2.2e-49 199.9 243 51.9
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 3.8e-49 199.1 272 50.7
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 1.1e-48 197.6 246 52.4
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 1.4e-48 197.2 255 51.0
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 1.4e-48 197.2 249 51.0
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 4.2e-48 195.7 278 47.5
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 5.4e-48 195.3 279 50.5
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 7.1e-48 194.9 243 52.7
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 9.3e-48 194.5 188 62.2
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 1.2e-47 194.1 243 51.9
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 1.2e-47 194.1 242 52.5
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.2e-47 194.1 245 53.1
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 1.2e-47 194.1 243 51.4
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 1.6e-47 193.7 204 56.9
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 1.6e-47 193.7 243 53.5
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 6.0e-47 191.8 246 52.8
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 2.3e-46 189.9 243 51.4
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 2.3e-46 189.9 246 51.6
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 3.9e-46 189.1 245 50.2
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 3.9e-46 189.1 261 49.8
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.1e-45 187.6 246 52.0
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 4.3e-45 185.7 193 56.5
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 4.3e-45 185.7 246 55.3
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 9.6e-45 184.5 242 50.8
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 3.7e-44 182.6 261 49.4
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 6.2e-44 181.8 188 56.9
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 3.1e-43 179.5 241 50.2
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 3.1e-43 179.5 190 56.3
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 4.0e-43 179.1 247 50.2
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 1.2e-42 177.6 241 49.4
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 2.0e-42 176.8 262 47.3
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 3.4e-42 176.0 241 49.4
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 4.5e-42 175.6 241 49.4
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 7.6e-42 174.9 136 71.3
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 9.9e-42 174.5 202 54.5
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 1.7e-41 173.7 278 46.8
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.7e-41 173.7 139 69.1
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 2.9e-41 172.9 232 48.7
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 3.8e-41 172.6 232 48.7
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 6.4e-41 171.8 227 49.3
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 6.4e-41 171.8 139 68.3
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 8.4e-41 171.4 247 48.6
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 1.1e-40 171.0 227 49.3
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 1.4e-40 170.6 137 68.6
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 3.2e-40 169.5 234 47.9
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 9.3e-40 167.9 235 48.5
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 2.1e-39 166.8 260 47.7
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 4.6e-39 165.6 235 48.1
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 1.0e-38 164.5 248 46.4
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 1.3e-36 157.5 265 41.1
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 8.2e-36 154.8 134 66.4
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 3.1e-35 152.9 252 43.7
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 1.2e-34 151.0 231 43.7
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.7e-33 147.1 121 66.9
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 6.5e-33 145.2 245 41.2
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 1.5e-29 134.0 192 48.4
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 2.4e-27 126.7 138 55.1
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.5e-26 124.0 175 48.6
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.3e-25 120.9 257 41.6
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 2.2e-20 103.6 73 74.0
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 4.8e-20 102.4 176 44.3
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 4.1e-19 99.4 74 70.3
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 7.7e-18 95.1 176 42.0
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 2.9e-17 93.2 219 34.2
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 3.8e-17 92.8 176 39.8
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 3.3e-13 79.7 157 42.0
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 6.5e-09 65.5 132 41.7
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.5e-08 63.5 124 37.1
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 1.6e-07 60.8 102 42.2
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 4.7e-07 59.3 87 39.1
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 6.1e-07 58.9 242 30.6
Cre12.g509300 Chlamydomonas reinhardtii HOM05D005104 ORTHO05D006614 1.4e-06 57.8 204 28.9


User provided reference genes

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