Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 7.7e-112 407.1 202 100.0
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 1.9e-65 253.1 196 68.4
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 1.9e-65 253.1 189 68.8
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 2.4e-65 252.7 169 72.2
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 3.2e-65 252.3 195 70.3
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 5.4e-65 251.5 181 72.4
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 7.0e-65 251.1 202 68.3
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 7.0e-65 251.1 200 65.5
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 9.2e-65 250.8 199 63.3
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 1.6e-64 250.0 210 64.3
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 3.5e-64 248.8 197 65.0
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 4.6e-64 248.4 202 62.9
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 6.0e-64 248.1 195 69.2
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 6.0e-64 248.1 159 76.1
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 1.0e-63 247.3 171 73.1
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 1.0e-63 247.3 171 73.1
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 1.0e-63 247.3 157 76.4
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.0e-63 247.3 160 76.9
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.9e-63 245.4 170 73.5
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 3.9e-63 245.4 160 76.2
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 6.6e-63 244.6 160 76.2
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 1.1e-62 243.8 197 66.0
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.1e-62 243.8 158 76.6
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 1.5e-62 243.4 181 68.5
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 1.9e-62 243.0 179 69.8
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 2.5e-62 242.7 167 73.1
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 3.3e-62 242.3 165 73.9
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 3.3e-62 242.3 158 74.7
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 4.3e-62 241.9 160 75.6
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 5.6e-62 241.5 202 63.9
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 5.6e-62 241.5 165 72.7
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 7.3e-62 241.1 165 73.3
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 1.6e-61 240.0 169 71.6
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 2.8e-61 239.2 165 72.1
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 3.6e-61 238.8 165 70.9
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 3.6e-61 238.8 196 66.8
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 4.7e-61 238.4 154 74.7
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 1.4e-60 236.9 162 71.6
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 1.8e-60 236.5 199 62.3
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 1.8e-60 236.5 168 70.2
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 4.0e-60 235.3 163 73.0
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 5.2e-60 235.0 177 67.2
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 6.8e-60 234.6 159 71.7
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 8.9e-60 234.2 204 61.3
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 8.9e-60 234.2 159 73.0
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 8.9e-60 234.2 159 73.0
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 2.6e-59 232.6 196 63.8
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 2.6e-59 232.6 162 74.7
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 2.6e-59 232.6 167 71.9
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 3.4e-59 232.3 162 74.1
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 4.4e-59 231.9 169 70.4
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 9.8e-59 230.7 163 70.6
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 9.8e-59 230.7 163 70.6
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 1.3e-58 230.3 173 69.4
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 1.7e-58 229.9 167 71.9
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 1.7e-58 229.9 178 66.9
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 1.7e-58 229.9 174 67.8
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 1.7e-58 229.9 163 70.6
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 2.9e-58 229.2 174 69.5
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 2.9e-58 229.2 201 62.7
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 3.7e-58 228.8 175 67.4
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 3.7e-58 228.8 158 71.5
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 1.4e-57 226.9 156 73.1
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 1.4e-57 226.9 156 73.1
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 3.2e-57 225.7 144 74.3
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 1.2e-56 223.8 177 66.1
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 2.1e-56 223.0 167 68.9
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 2.1e-56 223.0 185 62.7
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 7.8e-56 221.1 159 69.2
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 7.8e-56 221.1 159 69.2
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 1.3e-55 220.3 175 64.0
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 1.7e-55 219.9 173 67.6
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 3.0e-55 219.2 163 69.3
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 8.6e-55 217.6 134 78.4
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 3.3e-54 215.7 130 80.0
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 7.3e-54 214.5 201 61.2
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 9.5e-54 214.2 202 58.9
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 9.5e-54 214.2 199 59.8
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 1.2e-53 213.8 204 58.8
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 1.2e-53 213.8 161 66.5
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 1.6e-53 213.4 155 65.2
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 1.6e-53 213.4 172 64.0
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 2.8e-53 212.6 204 58.8
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 3.6e-53 212.2 168 67.9
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 6.2e-53 211.5 169 64.5
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 1.1e-52 210.7 203 58.6
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 2.3e-52 209.5 131 77.1
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 2.3e-52 209.5 131 77.1
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 4.0e-52 208.8 131 76.3
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 4.0e-52 208.8 131 76.3
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 4.0e-52 208.8 204 58.8
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 5.8e-51 204.9 120 76.7
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 1.3e-50 203.8 202 55.9
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 2.9e-50 202.6 131 74.0
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 4.9e-50 201.8 197 57.4
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.4e-49 200.3 179 59.2
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 4.1e-49 198.7 149 69.1
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 2.3e-47 193.0 132 66.7
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 2.1e-45 186.4 152 61.2
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 4.7e-45 185.3 113 78.8
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 1.4e-44 183.7 191 55.5
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 5.2e-44 181.8 113 77.0
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 8.9e-44 181.0 116 67.2
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 3.8e-42 175.6 108 72.2
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 6.4e-42 174.9 131 68.7
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 2.8e-37 159.5 114 63.2
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 4.2e-33 145.6 176 50.6
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 3.9e-31 139.0 134 55.2
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 6.7e-23 111.7 118 43.2
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 4.2e-17 92.4 106 40.6
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 3.0e-15 86.3 108 42.6
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 1.9e-14 83.6 59 64.4
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 5.7e-14 82.0 132 31.1


User provided reference genes

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