Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G341 Amborella trichopoda HOM05D008167 ORTHO05D010296 1.7e-154 549.3 273 100.0
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 6.6e-74 281.6 274 55.5
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 5.2e-71 271.9 250 57.6
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 1.3e-69 267.3 237 57.4
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 1.9e-68 263.5 252 52.8
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 3.5e-67 259.2 245 55.1
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 1.7e-66 256.9 237 54.9
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 1.1e-65 254.2 245 53.1
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 1.1e-65 254.2 281 48.8
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 1.9e-65 253.4 272 48.2
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 1.9e-65 253.4 244 51.2
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 2.1e-64 250.0 272 47.4
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 2.8e-64 249.6 236 56.8
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 3.6e-64 249.2 240 56.7
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 8.0e-64 248.1 253 51.8
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 1.1e-63 247.7 239 53.6
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 1.4e-63 247.3 239 51.9
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 6.8e-63 245.0 239 53.1
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 2.0e-62 243.4 239 51.5
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 4.4e-62 242.3 264 49.6
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 9.8e-62 241.1 264 49.6
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 3.7e-61 239.2 234 52.6
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 8.3e-61 238.0 245 49.4
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 2.4e-60 236.5 273 47.6
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 3.2e-60 236.1 260 47.3
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 1.2e-59 234.2 229 52.0
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 2.1e-59 233.4 210 53.8
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 3.5e-59 232.6 241 50.6
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 3.5e-59 232.6 236 50.0
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 7.8e-59 231.5 231 49.4
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 1.3e-58 230.7 235 52.8
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 6.6e-58 228.4 239 47.7
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 8.6e-58 228.0 248 44.8
vmacro21234 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 1.9e-57 226.9 311 43.4
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 3.6e-56 222.6 248 44.4
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 1.1e-55 221.1 274 41.6
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 1.1e-55 221.1 245 46.1
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 8.9e-55 218.0 240 47.1
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.6e-54 216.5 234 46.6
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 3.4e-54 216.1 258 43.0
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.9e-52 210.3 241 43.6
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 2.4e-52 209.9 204 50.5
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 4.1e-52 209.1 209 47.8
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 9.2e-52 208.0 225 48.4
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 2.7e-51 206.5 231 45.5
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 3.9e-50 202.6 237 45.1
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 3.3e-49 199.5 217 48.8
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 9.3e-44 181.4 238 42.4
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 1.2e-43 181.0 202 45.0
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 2.3e-42 176.8 165 50.9
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 2.1e-40 170.2 164 49.4
SEGI_30626 Sequoiadendron giganteum HOM05D008167 ORTHO05D010296 1.4e-39 167.5 219 43.4
Glyma.16G006900 Glycine max HOM05D008167 ORTHO05D010296 1.5e-38 164.1 199 45.7
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 6.6e-34 148.7 172 44.2
Haze_17026 Corylus avellana HOM05D000028 ORTHO05D010296 2.5e-33 146.7 167 46.7
Haze_00155 Corylus avellana HOM05D008167 ORTHO05D010296 1.2e-30 137.9 112 56.2
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 3.4e-30 136.3 111 55.9
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 4.6e-27 125.9 131 48.9
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 5.1e-26 122.5 133 45.9
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 1.1e-25 121.3 148 41.9
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 2.4e-23 113.6 148 44.6
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 4.2e-20 102.8 245 29.0
Haze_08650 Corylus avellana HOM05D008167 ORTHO05D010296 1.5e-17 94.4 82 51.2
Medtr8g020410 Medicago truncatula HOM05D008167 ORTHO05D010296 1.0e-05 55.1 48 45.8


User provided reference genes

Program Settings