Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 1.7e-284 981.9 463 100.0
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 8.9e-140 501.1 420 59.0
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.9e-137 493.4 374 63.1
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 2.4e-137 493.0 430 57.2
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 2.4e-137 493.0 430 57.2
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.2e-137 492.7 428 57.9
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 1.2e-136 490.7 372 61.6
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 1.5e-134 483.8 405 60.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 1.3e-133 480.7 452 55.3
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.4e-132 476.5 426 54.2
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 3.1e-132 476.1 380 61.6
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 4.0e-132 475.7 375 61.1
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 4.0e-132 475.7 398 59.8
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 1.5e-131 473.8 438 55.0
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 5.8e-131 471.9 468 52.8
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 5.8e-131 471.9 378 60.8
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 5.8e-131 471.9 415 57.1
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 2.2e-130 469.9 410 57.6
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 3.8e-130 469.2 495 50.7
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 6.4e-130 468.4 400 58.8
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 8.4e-130 468.0 456 54.4
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 8.4e-130 468.0 372 61.3
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-129 467.6 463 52.3
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.1e-129 467.6 403 57.8
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 4.2e-129 465.7 394 59.4
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 7.1e-129 464.9 455 54.1
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 9.3e-129 464.5 481 51.8
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 1.6e-128 463.8 455 53.4
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.6e-128 463.8 483 50.5
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.7e-128 463.0 410 57.3
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 2.7e-128 463.0 454 53.7
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.7e-128 463.0 444 54.3
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 2.7e-128 463.0 378 60.1
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.5e-128 462.6 464 53.0
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 6.0e-128 461.8 383 59.5
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 7.9e-128 461.5 401 56.6
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.0e-127 461.1 383 59.0
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.0e-127 461.1 461 53.1
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.7e-127 460.3 455 52.3
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 2.3e-127 459.9 459 51.9
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.0e-127 459.5 409 56.7
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 3.0e-127 459.5 480 51.7
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 3.9e-127 459.1 401 57.9
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 5.1e-127 458.8 375 59.7
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.5e-126 457.2 397 57.7
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 7.4e-126 454.9 375 58.7
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 9.6e-126 454.5 399 56.9
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 1.6e-125 453.8 369 59.3
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.6e-125 453.8 416 57.0
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 2.1e-125 453.4 386 58.8
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 2.1e-125 453.4 368 60.1
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.8e-125 453.0 465 52.7
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 3.6e-125 452.6 368 60.1
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 6.2e-125 451.8 464 52.4
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 8.1e-125 451.4 354 61.3
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 1.8e-124 450.3 465 53.1
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 3.1e-124 449.5 475 51.6
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 2.6e-123 446.4 429 53.1
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 3.4e-123 446.0 422 54.7
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 2.9e-122 443.0 367 58.6
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 6.4e-122 441.8 390 57.2
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 8.4e-122 441.4 464 51.5
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.1e-121 441.0 450 52.7
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 3.2e-121 439.5 443 53.0
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 5.5e-121 438.7 372 58.6
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 5.5e-121 438.7 433 54.3
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.2e-120 437.6 379 56.2
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 1.6e-120 437.2 420 54.0
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 4.6e-120 435.6 433 54.3
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.0e-119 434.5 418 55.0
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 1.3e-119 434.1 480 50.2
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.1e-118 431.0 437 53.1
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.5e-118 429.9 466 49.1
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 3.3e-118 429.5 392 55.9
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.6e-118 427.9 466 49.4
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.4e-116 424.1 380 56.1
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.4e-116 424.1 472 48.9
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 2.4e-116 423.3 472 49.6
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 3.1e-116 422.9 386 54.9
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 5.3e-116 422.2 412 53.2
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 9.0e-116 421.4 395 53.2
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.5e-115 420.6 472 48.7
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 4.5e-115 419.1 410 52.2
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 2.9e-114 416.4 414 53.6
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 4.9e-114 415.6 421 51.5
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 6.5e-114 415.2 380 54.7
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.1e-113 414.5 370 55.1
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.9e-113 413.7 418 52.4
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 2.5e-113 413.3 412 51.2
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 9.3e-113 411.4 386 53.9
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 4.6e-112 409.1 367 55.3
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 4.6e-112 409.1 367 55.3
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 4.6e-112 409.1 367 55.3
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 1.0e-111 407.9 361 55.4
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.0e-111 407.9 402 53.0
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 5.1e-111 405.6 427 49.6
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 6.3e-109 398.7 375 53.1
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.2e-105 386.3 445 46.1
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.7e-98 364.0 420 46.4
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 1.5e-81 307.8 301 52.8
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 2.6e-78 297.0 231 60.2
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.0e-75 287.3 355 45.4
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 5.5e-73 279.3 337 45.7
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 3.0e-71 273.5 476 36.6
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.8e-71 272.3 461 37.3
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 5.0e-66 256.1 253 53.0
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 5.0e-66 256.1 214 59.8
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 5.4e-60 236.1 410 35.1
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 3.0e-55 220.3 477 32.7
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 4.1e-44 183.3 306 37.6
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 9.8e-38 162.2 371 34.0
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 2.5e-33 147.5 359 32.0
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 9.5e-33 145.6 327 35.8
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 3.6e-32 143.7 369 32.0
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 4.7e-32 143.3 387 31.5
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 8.1e-32 142.5 200 43.0
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.2e-28 130.6 132 54.5
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.6e-24 117.1 231 39.0
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 4.7e-24 116.7 182 45.1
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.1e-23 115.5 270 31.9
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.5e-22 111.7 114 54.4
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 6.0e-19 99.8 64 67.2
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 3.7e-08 63.9 63 46.0


User provided reference genes

Program Settings