Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G307 Amborella trichopoda HOM05D000290 ORTHO05D067576 5.4e-30 133.7 67 100.0
ATR0564G056 Amborella trichopoda HOM05D000290 ORTHO05D009072 1.2e-08 62.8 46 73.9
PSO170G1297 Papaver somniferum HOM05D000290 ORTHO05D009072 2.6e-08 61.6 46 65.2
PSO210G7195 Papaver somniferum HOM05D000290 ORTHO05D009072 2.6e-08 61.6 46 65.2
Mapoly0121s0049 Marchantia polymorpha HOM05D000290 ORTHO05D009072 5.8e-08 60.5 46 67.4
HPP92_013076 Vanilla planifolia HOM05D000290 ORTHO05D009072 7.6e-08 60.1 46 63.0
COL.COLO4_24477 Corchorus olitorius HOM05D000290 ORTHO05D009072 1.0e-07 59.7 47 59.6
Gohir.D06G114500 Gossypium hirsutum HOM05D000290 ORTHO05D009072 1.7e-07 58.9 46 65.2
SEGI_24217 Sequoiadendron giganteum HOM05D000290 ORTHO05D009072 1.7e-07 58.9 37 73.0
Atru.chr13.1952 Acer truncatum HOM05D000290 ORTHO05D009072 2.2e-07 58.5 47 57.4
Thecc.08G196900 Theobroma cacao HOM05D000290 ORTHO05D009072 2.2e-07 58.5 56 53.6
Aqoxy5G02006 Aquilegia oxysepala HOM05D000290 ORTHO05D009072 2.9e-07 58.2 46 60.9
Dinv41010 Davidia involucrata HOM05D000290 ORTHO05D009072 3.8e-07 57.8 46 58.7
Gohir.A06G110600 Gossypium hirsutum HOM05D000290 ORTHO05D009072 3.8e-07 57.8 46 63.0
Gorai.010G130800 Gossypium raimondii HOM05D000290 ORTHO05D009072 3.8e-07 57.8 46 63.0
Oeu036728.2 Olea europaea HOM05D000290 ORTHO05D009072 3.8e-07 57.8 60 50.0
Os04g0640500 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D009072 4.9e-07 57.4 36 75.0
Potri.002G061000 Populus trichocarpa HOM05D000290 ORTHO05D009072 4.9e-07 57.4 46 58.7
Sabra02G0049500 Salix brachista HOM05D000290 ORTHO05D009072 4.9e-07 57.4 46 58.7
CDE08G1284 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 6.5e-07 57.0 51 54.9
BcaC08g46612 Brassica carinata HOM05D000290 ORTHO05D009072 8.4e-07 56.6 46 54.3
Duzib116G0362 Durio zibethinus HOM05D000290 ORTHO05D009072 8.4e-07 56.6 56 51.8
Aa31LG4G8820 Aethionema arabicum HOM05D000290 ORTHO05D009072 1.1e-06 56.2 46 56.5
A07p37960 Brassica napus HOM05D000290 ORTHO05D009072 1.1e-06 56.2 46 54.3
C06p45880 Brassica napus HOM05D000290 ORTHO05D009072 1.1e-06 56.2 46 54.3
Migut.N02931 Erythranthe guttata HOM05D000290 ORTHO05D009072 1.1e-06 56.2 47 55.3
Lalb_Chr19g0129911 Lupinus albus HOM05D000290 ORTHO05D009072 1.1e-06 56.2 46 56.5
Manes.18G096700 Manihot esculenta HOM05D000290 ORTHO05D009072 1.1e-06 56.2 46 56.5
AagrBONN_evm.TU.Sc2ySwM_117.333 Anthoceros agrestis HOM05D000290 ORTHO05D009072 1.4e-06 55.8 46 60.9
Nn5g28903 Nelumbo nucifera HOM05D000290 ORTHO05D009072 1.4e-06 55.8 46 56.5
Medtr6g038750 Medicago truncatula HOM05D000290 ORTHO05D009072 1.9e-06 55.5 46 56.5
Prupe.8G046100 Prunus persica HOM05D000290 ORTHO05D009072 1.9e-06 55.5 47 53.2
THA.LOC104800100 Tarenaya hassleriana HOM05D000290 ORTHO05D009072 1.9e-06 55.5 46 54.3
TPR.G16178 Trifolium pratense HOM05D000290 ORTHO05D009072 1.9e-06 55.5 46 56.5
Actinidia29564 Actinidia chinensis HOM05D000290 ORTHO05D009072 2.5e-06 55.1 46 54.3
CARHR290970 Cardamine hirsuta HOM05D000290 ORTHO05D009072 2.5e-06 55.1 46 54.3
MBI05_g00331_MAGBIO Magnolia biondii HOM05D000290 ORTHO05D009072 2.5e-06 55.1 36 75.0
RcHm_v2.0_Chr6g0273371 Rosa chinensis HOM05D000290 ORTHO05D009072 2.5e-06 55.1 47 51.1
Zm00001eb069010 Zea mays HOM05D000290 ORTHO05D009072 2.5e-06 55.1 36 72.2
CSS0016940 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D009072 3.2e-06 54.7 46 54.3
CSS0023661 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D009072 3.2e-06 54.7 46 54.3
Thhalv10018208m.g Eutrema salsugineum HOM05D000290 ORTHO05D009072 3.2e-06 54.7 46 52.2
Lsat_1_v5_gn_6_100021 Lactuca sativa HOM05D000290 ORTHO05D009072 3.2e-06 54.7 46 54.3
QL02p035468 Quercus lobata HOM05D000290 ORTHO05D009072 3.2e-06 54.7 56 50.0
Sp5g26840 Schrenkiella parvula HOM05D000290 ORTHO05D009072 3.2e-06 54.7 46 52.2
SpUn0020_0130 Schrenkiella parvula HOM05D000290 ORTHO05D009072 3.2e-06 54.7 46 52.2
TWI34G0968 Tripterygium wilfordii HOM05D000290 ORTHO05D009072 3.2e-06 54.7 36 69.4
Ca_04646_v3 Cicer arietinum L. HOM05D000290 ORTHO05D009072 4.2e-06 54.3 46 54.3
Ciclev10000457m.g Citrus clementina HOM05D000290 ORTHO05D009072 4.2e-06 54.3 56 51.8
Haze_17850 Corylus avellana HOM05D000290 ORTHO05D009072 4.2e-06 54.3 46 54.3
HanXRQChr10g0278701 Helianthus annuus HOM05D000290 ORTHO05D009072 4.2e-06 54.3 46 54.3
Pp3c9_4120 Physcomitrium patens HOM05D000290 ORTHO05D009072 4.2e-06 54.3 46 58.7
Rhsim11G0089800 Rhododendron simsii HOM05D000290 ORTHO05D009072 4.2e-06 54.3 46 54.3
CANSAT25G0877 Cannabis sativa HOM05D000290 ORTHO05D009072 5.5e-06 53.9 56 48.2
ECA246G3877 Erigeron canadensis HOM05D000290 ORTHO05D009072 5.5e-06 53.9 46 54.3
Eucgr.F02663 Eucalyptus grandis HOM05D000290 ORTHO05D009072 5.5e-06 53.9 36 66.7
PGR042G2237 Punica granatum HOM05D000290 ORTHO05D009072 5.5e-06 53.9 36 66.7
AL2G31380 Arabidopsis lyrata HOM05D000290 ORTHO05D009072 7.1e-06 53.5 46 52.2
AT1G71810 Arabidopsis thaliana HOM05D000290 ORTHO05D009072 7.1e-06 53.5 46 52.2
FvH4_2g12660 Fragaria vesca HOM05D000290 ORTHO05D009072 7.1e-06 53.5 46 50.0
FAN20G1167 Fragaria x ananassa HOM05D000290 ORTHO05D009072 7.1e-06 53.5 46 50.0
FAN20G1796 Fragaria x ananassa HOM05D000290 ORTHO05D009072 7.1e-06 53.5 46 50.0
FAN24G2214 Fragaria x ananassa HOM05D000290 ORTHO05D009072 7.1e-06 53.5 46 50.0
FAN27G3199 Fragaria x ananassa HOM05D000290 ORTHO05D009072 7.1e-06 53.5 46 50.0
Phvul.004G087801 Phaseolus vulgaris HOM05D000290 ORTHO05D009072 7.1e-06 53.5 46 54.3
Cpa.g.sc26.139 Carica papaya HOM05D000290 ORTHO05D009072 9.3e-06 53.1 47 51.1
Glyma.16G158700 Glycine max HOM05D000290 ORTHO05D009072 9.3e-06 53.1 46 52.2


User provided reference genes

Program Settings