Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 5.5e-181 637.5 318 100.0
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.4e-80 303.9 297 55.6
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 2.7e-79 299.7 301 53.2
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 1.2e-71 274.2 298 50.7
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 7.9e-71 271.6 311 46.9
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 1.0e-70 271.2 298 49.0
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 2.5e-69 266.5 298 51.3
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 2.5e-69 266.5 298 49.3
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 4.3e-69 265.8 300 49.7
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 7.4e-69 265.0 298 47.0
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 3.7e-68 262.7 300 49.7
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 1.1e-67 261.2 300 49.0
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 1.1e-67 261.2 300 49.7
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 1.8e-67 260.4 298 49.3
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 4.1e-67 259.2 301 48.5
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 2.6e-66 256.5 300 49.7
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 5.9e-66 255.4 323 47.7
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 1.3e-65 254.2 302 46.7
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 1.7e-65 253.8 300 49.7
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 2.2e-65 253.4 297 47.8
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 2.2e-65 253.4 302 46.4
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 6.5e-65 251.9 299 46.8
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 6.5e-65 251.9 300 47.0
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 1.1e-64 251.1 299 47.2
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.9e-64 250.4 299 48.2
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 3.2e-64 249.6 299 46.2
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.2e-64 249.2 312 48.1
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 4.2e-64 249.2 298 44.0
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 7.2e-64 248.4 300 47.7
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 1.6e-63 247.3 300 47.3
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.1e-63 246.9 298 44.0
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 3.6e-63 246.1 298 49.0
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 6.1e-63 245.4 299 46.2
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 7.9e-63 245.0 299 44.5
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 1.8e-62 243.8 301 44.9
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 2.3e-62 243.4 297 45.5
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 2.0e-61 240.4 302 47.4
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 1.7e-60 237.3 297 43.8
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 4.8e-60 235.7 297 43.4
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 6.3e-60 235.3 297 44.1
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 8.2e-60 235.0 298 46.0
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.1e-59 234.6 298 46.0
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 2.4e-59 233.4 297 43.1
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 4.1e-59 232.6 298 43.3
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 4.1e-59 232.6 298 45.6
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 5.3e-59 232.3 299 45.2
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 1.2e-58 231.1 298 43.3
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.5e-58 230.7 298 46.3
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 2.0e-58 230.3 298 45.0
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 2.6e-58 229.9 301 44.9
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 5.9e-58 228.8 300 45.7
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 5.9e-58 228.8 298 43.0
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 5.9e-58 228.8 297 45.1
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 7.7e-58 228.4 299 44.1
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 1.3e-57 227.6 299 45.2
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 1.3e-57 227.6 303 44.2
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 2.2e-57 226.9 301 43.9
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 2.2e-57 226.9 308 44.2
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 2.2e-57 226.9 261 48.7
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 3.8e-57 226.1 298 45.0
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 3.8e-57 226.1 301 43.5
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 8.5e-57 224.9 299 45.2
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 8.5e-57 224.9 346 40.5
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 1.4e-56 224.2 299 44.8
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 2.5e-56 223.4 297 44.1
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 4.2e-56 222.6 298 43.3
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.6e-55 220.7 260 48.5
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 4.7e-55 219.2 298 43.0
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 4.7e-55 219.2 299 43.8
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 6.1e-55 218.8 298 41.6
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 3.0e-54 216.5 299 42.5
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 3.9e-54 216.1 301 43.2
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 3.9e-54 216.1 298 40.6
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 1.1e-53 214.5 298 40.9
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 1.1e-53 214.5 313 43.8
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.5e-53 214.2 323 42.1
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 2.0e-53 213.8 300 41.3
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 3.3e-53 213.0 297 42.4
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 3.3e-53 213.0 300 40.7
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 4.4e-53 212.6 315 43.5
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 1.7e-52 210.7 300 41.0
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 1.7e-52 210.7 298 44.6
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 3.7e-52 209.5 300 41.0
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 3.7e-52 209.5 301 42.9
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 8.2e-52 208.4 300 40.7
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 1.8e-51 207.2 298 41.3
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 1.8e-51 207.2 261 45.2
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.8e-51 207.2 303 43.2
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 3.1e-51 206.5 307 39.7
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 9.1e-51 204.9 302 40.4
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 2.6e-50 203.4 252 45.2
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 7.7e-50 201.8 306 39.2
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 2.9e-49 199.9 302 40.7
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 2.9e-49 199.9 299 41.5
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 6.5e-49 198.7 307 38.8
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 5.5e-48 195.7 299 39.5
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 1.2e-47 194.5 302 39.7
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 3.6e-47 193.0 303 39.6
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 4.7e-47 192.6 252 44.8
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 1.8e-46 190.7 322 37.3
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 2.3e-46 190.3 297 38.4
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.8e-44 182.6 255 45.9
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 8.3e-44 181.8 298 38.6
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 8.3e-44 181.8 309 40.1
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 6.5e-41 172.2 268 42.2
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 2.5e-40 170.2 302 36.4
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 6.1e-39 165.6 251 40.2
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 8.0e-39 165.2 213 45.1
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 1.7e-36 157.5 298 35.6
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 8.3e-36 155.2 308 35.4
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 1.1e-35 154.8 297 35.7
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 5.4e-35 152.5 211 42.2
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 7.0e-35 152.1 251 37.8
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 3.5e-34 149.8 205 42.4
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.3e-33 147.1 250 37.6
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 1.9e-32 144.1 211 39.3
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 3.3e-32 143.3 255 37.3
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 2.1e-31 140.6 297 34.0
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 3.6e-31 139.8 257 38.9
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 6.8e-30 135.6 206 39.8
ATR1155G039 Amborella trichopoda HOM05D006276 ORTHO05D007724 3.3e-24 116.7 71 85.9
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 3.3e-24 116.7 202 38.1
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 1.2e-23 114.8 142 45.1
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.7e-12 77.8 47 70.2
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.7e-12 77.8 47 70.2
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 3.9e-09 66.6 46 67.4
Lj7A276T16 Lonicera japonica HOM05D006276 ORTHO05D007724 1.8e-06 57.8 49 53.1


User provided reference genes

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