Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G289 Amborella trichopoda HOM05D003845 ORTHO05D004161 1.3e-196 689.5 346 100.0
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 3.6e-125 452.2 288 79.2
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 5.1e-124 448.4 288 78.8
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 6.7e-124 448.0 288 78.1
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 1.1e-123 447.2 288 78.1
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 2.0e-123 446.4 288 78.1
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 4.8e-122 441.8 288 77.4
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 3.1e-121 439.1 288 77.1
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 4.1e-121 438.7 288 76.7
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 4.1e-121 438.7 288 76.7
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 4.1e-121 438.7 288 75.3
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 1.2e-120 437.2 288 76.4
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 1.2e-120 437.2 288 76.4
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 2.0e-120 436.4 295 74.2
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 2.6e-120 436.0 288 76.0
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 2.6e-120 436.0 288 76.0
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 3.4e-120 435.6 288 77.8
CSS0018407 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 3.4e-120 435.6 288 77.8
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 5.9e-120 434.9 288 76.4
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 7.7e-120 434.5 288 76.4
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 1.0e-119 434.1 288 75.7
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 2.9e-119 432.6 288 74.7
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 5.0e-119 431.8 288 74.3
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 8.5e-119 431.0 288 75.3
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 1.1e-118 430.6 288 74.0
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 1.4e-118 430.3 288 75.0
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 7.2e-118 427.9 288 74.3
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 7.2e-118 427.9 288 75.0
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 3.6e-117 425.6 288 74.7
Ciclev10011943m.g Citrus clementina HOM05D003845 ORTHO05D004161 4.7e-117 425.2 288 74.3
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 4.7e-117 425.2 288 73.6
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 1.0e-116 424.1 288 75.0
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 1.0e-116 424.1 304 70.7
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 1.0e-116 424.1 304 70.7
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 1.4e-116 423.7 288 72.6
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 1.8e-116 423.3 288 75.0
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 1.8e-116 423.3 288 74.0
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 2.3e-116 422.9 288 74.0
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 3.0e-116 422.5 288 73.6
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 3.0e-116 422.5 288 73.6
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 3.9e-116 422.2 288 74.3
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 5.2e-116 421.8 288 72.6
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 6.7e-116 421.4 288 70.8
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 1.1e-115 420.6 288 74.7
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.1e-115 420.6 288 73.6
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 2.0e-115 419.9 288 74.7
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 2.6e-115 419.5 288 73.3
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 5.7e-115 418.3 286 74.8
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 7.4e-115 417.9 290 73.1
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 1.7e-114 416.8 288 73.3
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 1.7e-114 416.8 288 76.0
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 1.8e-113 413.3 288 71.9
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.8e-113 413.3 288 71.9
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 1.8e-113 413.3 287 72.8
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 1.8e-113 413.3 288 73.3
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 4.1e-113 412.1 290 70.7
SEGI_40473 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 2.0e-112 409.8 292 70.5
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 1.0e-111 407.5 290 71.4
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 1.3e-111 407.1 288 70.1
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 8.5e-111 404.4 288 70.8
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 1.5e-110 403.7 287 71.1
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 4.2e-110 402.1 289 70.6
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 7.2e-110 401.4 292 69.9
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 1.2e-109 400.6 288 71.2
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 1.2e-109 400.6 288 70.5
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 8.0e-109 397.9 292 69.5
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 8.0e-109 397.9 288 70.1
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 1.0e-108 397.5 290 69.7
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 1.0e-108 397.5 288 69.8
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 1.4e-108 397.1 288 70.1
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 4.0e-108 395.6 290 69.7
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 1.5e-107 393.7 290 69.0
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 1.5e-107 393.7 290 69.0
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 3.3e-107 392.5 288 69.1
Lj2C445T15 Lonicera japonica HOM05D003845 ORTHO05D004161 1.3e-106 390.6 264 74.2
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 1.7e-106 390.2 290 68.6
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 4.8e-106 388.7 296 66.9
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 1.2e-104 384.0 255 75.3
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 3.2e-102 375.9 287 67.2
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 1.5e-99 367.1 287 66.6
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 2.7e-96 356.3 410 52.0
ClCG11G005430 Citrullus lanatus HOM05D003845 ORTHO05D004161 1.0e-95 354.4 245 71.4
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 1.8e-92 343.6 294 62.2
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 3.0e-92 342.8 289 60.6
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 5.4e-89 332.0 289 62.3
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 2.3e-87 326.6 265 64.2
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 3.6e-85 319.3 290 59.0
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 6.4e-82 308.5 290 53.8
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 2.1e-77 293.5 215 70.7
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 3.6e-77 292.7 272 57.7
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 9.8e-75 284.6 210 66.7
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 1.6e-72 277.3 289 50.5
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 1.1e-65 254.6 218 61.9
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 5.6e-62 242.3 174 69.0
Rhsim09G0080700 Rhododendron simsii HOM05D003845 ORTHO05D004161 5.2e-60 235.7 210 61.9
CAN.G625.3 Capsicum annuum HOM05D003845 ORTHO05D004161 2.4e-52 210.3 150 70.7
Haze_14141 Corylus avellana HOM05D003845 ORTHO05D004161 1.6e-48 197.6 131 74.0
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 2.1e-45 187.2 136 69.9
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 4.8e-45 186.0 119 77.3
QL02p051676 Quercus lobata HOM05D003845 ORTHO05D004161 1.7e-42 177.6 115 75.7
Actinidia15875 Actinidia chinensis HOM05D003845 ORTHO05D004161 9.3e-41 171.8 115 74.8
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 2.1e-40 170.6 116 72.4
RcHm_v2.0_Chr2g0163391 Rosa chinensis HOM05D003845 ORTHO05D004161 2.9e-26 123.6 148 48.6
Lsat_1_v5_gn_4_153641 Lactuca sativa HOM05D003845 ORTHO05D004161 6.5e-26 122.5 101 68.3
Cre16.g684100 Chlamydomonas reinhardtii HOM05D003845 ORTHO05D004161 2.6e-19 100.5 298 27.9
RcHm_v2.0_Chr2g0123031 Rosa chinensis HOM05D003845 ORTHO05D004161 3.9e-15 86.7 70 64.3
Pp3c9_4980 Physcomitrium patens HOM05D003845 ORTHO05D004161 1.3e-13 81.6 117 40.2
arahy.Tifrunner.gnm1.ann1.57NG5G Arachis hypogaea HOM05D003845 ORTHO05D004161 2.8e-13 80.5 57 63.2
PRCOL_00002157 Prasinoderma coloniale HOM05D003845 ORTHO05D004161 1.1e-12 78.6 227 28.2
COL.COLO4_16180 Corchorus olitorius HOM05D003845 ORTHO05D004161 1.8e-12 77.8 45 84.4
arahy.Tifrunner.gnm1.ann1.395ZIT Arachis hypogaea HOM05D003845 ORTHO05D004161 3.1e-12 77.0 56 60.7
Actinidia17348 Actinidia chinensis HOM05D003226 ORTHO05D015784 7.7e-11 72.4 47 74.5
Actinidia17345 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.3e-10 71.6 45 77.8
Hund04285 Selenicereus undatus HOM05D003845 ORTHO05D004161 5.0e-10 69.7 65 56.9
ClCG11G005420 Citrullus lanatus HOM05D003845 ORTHO05D004161 1.4e-09 68.2 67 55.2
MBI02_g02968_MAGBIO Magnolia biondii HOM05D003845 ORTHO05D004161 2.5e-09 67.4 45 73.3
arahy.Tifrunner.gnm1.ann1.MNN8Y6 Arachis hypogaea HOM05D003845 ORTHO05D004161 6.7e-07 59.3 63 52.4


User provided reference genes

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