Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G199 Amborella trichopoda HOM05D000021 ORTHO05D000010 7.6e-39 163.3 80 100.0
ATR0041G010 Amborella trichopoda HOM05D000021 ORTHO05D000010 3.0e-27 124.8 74 82.4
ATR1152G101 Amborella trichopoda HOM05D000021 ORTHO05D000010 1.5e-23 112.5 69 78.3
ATR0618G443 Amborella trichopoda HOM05D000021 ORTHO05D000010 1.4e-21 105.9 74 70.3
ATR0605G065 Amborella trichopoda HOM05D000021 ORTHO05D000010 1.9e-21 105.5 78 67.9
ATR0022G006 Amborella trichopoda HOM05D000021 ORTHO05D000010 2.0e-15 85.5 72 61.1
SEGI_22124 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 2.4e-08 62.0 65 49.2
Potri.016G029900 Populus trichocarpa HOM05D000021 ORTHO05D000010 3.1e-08 61.6 57 50.9
Medtr8g068540 Medicago truncatula HOM05D000021 ORTHO05D000010 4.1e-08 61.2 65 43.1
SEGI_23578 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 5.3e-08 60.8 66 43.9
Nn2g11210 Nelumbo nucifera HOM05D000021 ORTHO05D000010 7.0e-08 60.5 40 62.5
SEGI_31528 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 9.1e-08 60.1 65 43.1
Psat6g004560 Pisum sativum HOM05D000021 ORTHO05D000010 1.2e-07 59.7 65 41.5
CSS0045315 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 2.7e-07 58.5 48 52.1
DCAR_003172 Daucus carota HOM05D000021 ORTHO05D000010 2.7e-07 58.5 46 52.2
QL08p062910 Quercus lobata HOM05D000021 ORTHO05D000010 2.7e-07 58.5 61 44.3
TAR381G0941 Trochodendron aralioides HOM05D000021 ORTHO05D000010 2.7e-07 58.5 48 47.9
DCAR_004266 Daucus carota HOM05D000021 ORTHO05D000010 3.5e-07 58.2 47 51.1
SEGI_33244 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 3.5e-07 58.2 45 53.3
CSS0030191 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 4.5e-07 57.8 77 42.9
DCAR_029421 Daucus carota HOM05D000021 ORTHO05D000010 5.9e-07 57.4 65 44.6
QL08p062868 Quercus lobata HOM05D000021 ORTHO05D000010 5.9e-07 57.4 41 53.7
QL09p049222 Quercus lobata HOM05D000021 ORTHO05D000010 5.9e-07 57.4 39 56.4
ECA246G4945 Erigeron canadensis HOM05D000021 ORTHO05D000010 1.0e-06 56.6 69 43.5
Eucgr.B02264 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.0e-06 56.6 38 47.4
Lalb_Chr05g0215131 Lupinus albus HOM05D000021 ORTHO05D000010 1.0e-06 56.6 43 53.5
QL10p043215 Quercus lobata HOM05D000021 ORTHO05D000010 1.0e-06 56.6 39 51.3
SEGI_04125 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 1.0e-06 56.6 65 44.6
SEGI_17901 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 1.0e-06 56.6 52 46.2
Eucgr.J01925 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.3e-06 56.2 70 37.1
PGR044G2615 Punica granatum HOM05D000021 ORTHO05D000010 1.3e-06 56.2 38 60.5
DCAR_024840 Daucus carota HOM05D000021 ORTHO05D000010 1.7e-06 55.8 60 41.7
Eucgr.J02814 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.7e-06 55.8 71 40.8
MD04G1156300 Malus domestica HOM05D000021 ORTHO05D000010 1.7e-06 55.8 70 38.6
MD04G1157600 Malus domestica HOM05D000021 ORTHO05D000010 1.7e-06 55.8 70 38.6
PGR102G2774 Punica granatum HOM05D000021 ORTHO05D000010 1.7e-06 55.8 41 53.7
QL08p062967 Quercus lobata HOM05D000021 ORTHO05D000010 1.7e-06 55.8 41 53.7
Solyc03g096190.2 Solanum lycopersicum HOM05D000021 ORTHO05D000010 1.7e-06 55.8 71 40.8
Ciclev10004386m.g Citrus clementina HOM05D000021 ORTHO05D000010 2.2e-06 55.5 63 46.0
ECA238G0632 Erigeron canadensis HOM05D000021 ORTHO05D000010 2.2e-06 55.5 38 57.9
Gorai.006G042200 Gossypium raimondii HOM05D000021 ORTHO05D000010 2.2e-06 55.5 59 49.2
MD04G1158300 Malus domestica HOM05D000021 ORTHO05D000010 2.2e-06 55.5 44 50.0
QL04p088606 Quercus lobata HOM05D000021 ORTHO05D000010 2.2e-06 55.5 63 41.3
SEGI_01211 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 2.2e-06 55.5 69 40.6
SEGI_37159 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 2.2e-06 55.5 65 41.5
QL09p003453 Quercus lobata HOM05D000021 ORTHO05D000010 2.9e-06 55.1 64 39.1
SEGI_22178 Sequoiadendron giganteum HOM05D000021 ORTHO05D000001 2.9e-06 55.1 45 42.2
arahy.Tifrunner.gnm1.ann1.QK0Y39 Arachis hypogaea HOM05D000021 ORTHO05D000010 3.8e-06 54.7 50 44.0
arahy.Tifrunner.gnm1.ann1.RAB7YL Arachis hypogaea HOM05D000021 ORTHO05D000010 3.8e-06 54.7 50 44.0
CSS0038481 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 3.8e-06 54.7 64 43.8
DCAR_004472 Daucus carota HOM05D000191 ORTHO05D000122 3.8e-06 54.7 41 53.7
Eucgr.F04396 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.8e-06 54.7 51 43.1
FvH4_7g24510 Fragaria vesca HOM05D000021 ORTHO05D000010 3.8e-06 54.7 65 43.1
Hma1.2p1_0178F.1_g078640 Hydrangea macrophylla HOM05D000021 ORTHO05D000010 3.8e-06 54.7 43 46.5
CSS0002810 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 5.0e-06 54.3 39 53.8
CSS0035895 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 5.0e-06 54.3 52 48.1
FAN01G1107 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.0e-06 54.3 66 43.9
Glyma.07G147800 Glycine max HOM05D000021 ORTHO05D000010 5.0e-06 54.3 42 45.2
MD04G1156700 Malus domestica HOM05D000021 ORTHO05D000010 5.0e-06 54.3 70 37.1
SEGI_14437 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 5.0e-06 54.3 70 37.1
SEGI_16886 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 5.0e-06 54.3 66 40.9
TAR624G0758 Trochodendron aralioides HOM05D000021 ORTHO05D000042 5.0e-06 54.3 61 41.0
CSS0012332 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 6.5e-06 53.9 42 52.4
Cpa.g.sc19.192 Carica papaya HOM05D000021 ORTHO05D000010 6.5e-06 53.9 45 51.1
Duzib213G0382 Durio zibethinus HOM05D000021 ORTHO05D000010 6.5e-06 53.9 62 43.5
ECA248G2062 Erigeron canadensis HOM05D000021 ORTHO05D000010 6.5e-06 53.9 38 47.4
Manes.07G127602 Manihot esculenta HOM05D000021 ORTHO05D000010 6.5e-06 53.9 63 38.1
Manes.10G054200 Manihot esculenta HOM05D000021 ORTHO05D000010 6.5e-06 53.9 64 37.5
Oeu027102.1 Olea europaea HOM05D000021 ORTHO05D000010 6.5e-06 53.9 59 39.0
SEGI_04087 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 6.5e-06 53.9 65 38.5
Thecc.04G214000 Theobroma cacao HOM05D000021 ORTHO05D000010 6.5e-06 53.9 68 42.6
TAR622G0023 Trochodendron aralioides HOM05D000021 ORTHO05D000010 6.5e-06 53.9 64 43.8
ATR0618G261 Amborella trichopoda HOM05D000021 ORTHO05D000010 8.5e-06 53.5 63 46.0
arahy.Tifrunner.gnm1.ann1.ZJ6MUL Arachis hypogaea HOM05D000021 ORTHO05D000010 8.5e-06 53.5 69 40.6
Eucgr.F02245 Eucalyptus grandis HOM05D000021 ORTHO05D000010 8.5e-06 53.5 49 44.9
Lj1g0008541 Lotus japonicus HOM05D000021 ORTHO05D000010 8.5e-06 53.5 59 39.0
Peaxi162Scf00025g00286 Petunia axillaris HOM05D000021 ORTHO05D000010 8.5e-06 53.5 61 37.7
PGR004G1116 Punica granatum HOM05D000021 ORTHO05D000010 8.5e-06 53.5 38 55.3
QL01p037912 Quercus lobata HOM05D000021 ORTHO05D000010 8.5e-06 53.5 81 40.7
QL08p060570 Quercus lobata HOM05D000021 ORTHO05D000010 8.5e-06 53.5 62 37.1
QL10p043243 Quercus lobata HOM05D000021 ORTHO05D000010 8.5e-06 53.5 39 51.3
Sed0021819 Sechium edule HOM05D000021 ORTHO05D000010 8.5e-06 53.5 63 36.5
TAR636G3398 Trochodendron aralioides HOM05D000021 ORTHO05D000010 8.5e-06 53.5 43 46.5
vmacro02972 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 8.5e-06 53.5 43 46.5


User provided reference genes

Program Settings