Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 8.6e-114 413.7 213 100.0
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 2.7e-46 189.5 168 57.1
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.5e-44 183.0 175 57.1
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.5e-44 183.0 172 57.6
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.2e-43 180.6 209 47.8
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 1.2e-43 180.6 171 55.0
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 5.7e-41 171.8 140 57.1
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.7e-40 170.2 154 59.1
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 1.7e-40 170.2 154 56.5
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.2e-40 169.9 155 53.5
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 4.8e-40 168.7 159 56.6
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 8.3e-40 167.9 149 55.0
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.1e-39 167.5 166 51.8
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 1.1e-39 167.5 149 55.0
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.4e-39 167.2 151 57.0
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.4e-39 167.2 151 57.0
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 1.4e-39 167.2 157 50.3
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.8e-39 166.8 160 54.4
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 1.8e-39 166.8 154 54.5
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 3.1e-39 166.0 141 57.4
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 4.1e-39 165.6 147 57.1
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 7.0e-39 164.9 149 55.0
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 7.0e-39 164.9 149 55.0
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 9.1e-39 164.5 146 58.9
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 9.1e-39 164.5 155 56.1
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 1.2e-38 164.1 201 48.3
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.2e-38 164.1 150 54.7
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 1.6e-38 163.7 154 55.8
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 2.0e-38 163.3 148 55.4
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 3.5e-38 162.5 154 50.6
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 3.5e-38 162.5 149 51.0
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 3.5e-38 162.5 149 51.0
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 3.5e-38 162.5 149 51.0
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 3.5e-38 162.5 144 55.6
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 4.5e-38 162.2 146 56.2
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 4.5e-38 162.2 156 51.9
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 4.5e-38 162.2 171 50.9
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 4.5e-38 162.2 151 55.0
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 7.7e-38 161.4 155 55.5
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.3e-37 160.6 146 56.8
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 1.3e-37 160.6 141 56.0
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 1.7e-37 160.2 149 57.0
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 1.7e-37 160.2 162 52.5
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 2.2e-37 159.8 167 49.1
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 2.9e-37 159.5 138 57.2
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 5.0e-37 158.7 146 58.2
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 5.0e-37 158.7 157 52.9
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 5.0e-37 158.7 156 51.3
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.1e-36 157.5 202 44.1
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.1e-36 157.5 152 55.3
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.5e-36 157.1 148 53.4
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 1.9e-36 156.8 164 48.2
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 1.9e-36 156.8 183 46.4
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 5.5e-36 155.2 154 50.6
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 7.2e-36 154.8 192 44.8
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 9.4e-36 154.5 156 52.6
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 1.2e-35 154.1 157 52.2
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 1.6e-35 153.7 149 53.7
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.1e-35 153.3 171 47.4
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 2.1e-35 153.3 159 48.4
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 2.1e-35 153.3 160 49.4
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 2.7e-35 152.9 164 50.0
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 3.6e-35 152.5 146 54.8
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 3.6e-35 152.5 177 46.3
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 3.6e-35 152.5 160 48.8
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 4.7e-35 152.1 172 47.1
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 4.7e-35 152.1 155 55.5
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 6.1e-35 151.8 146 52.7
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 8.0e-35 151.4 149 53.0
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 8.0e-35 151.4 200 41.5
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 1.0e-34 151.0 177 46.9
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 4.0e-34 149.1 176 45.5
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 4.0e-34 149.1 189 43.9
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 4.0e-34 149.1 145 51.0
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 5.2e-34 148.7 195 43.1
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 5.2e-34 148.7 178 46.1
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 6.8e-34 148.3 189 43.4
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 6.8e-34 148.3 147 51.0
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 6.8e-34 148.3 162 51.2
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 8.8e-34 147.9 179 44.1
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 8.8e-34 147.9 189 43.4
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 8.8e-34 147.9 189 43.4
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 8.8e-34 147.9 189 43.4
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 1.2e-33 147.5 159 49.1
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 1.5e-33 147.1 188 43.1
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 1.5e-33 147.1 191 42.9
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 1.5e-33 147.1 142 54.2
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 5.7e-33 145.2 160 49.4
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 7.5e-33 144.8 163 47.2
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 9.8e-33 144.4 164 46.3
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.3e-32 144.1 145 50.3
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.3e-32 144.1 166 45.8
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.7e-32 143.7 166 45.2
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 2.2e-32 143.3 142 52.1
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 2.8e-32 142.9 170 45.3
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 2.8e-32 142.9 149 51.0
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 2.8e-32 142.9 132 55.3
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 1.1e-31 141.0 195 42.6
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 1.4e-31 140.6 199 41.7
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.4e-31 139.8 161 46.6
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 7.0e-31 138.3 153 47.7
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 1.0e-29 134.4 169 43.8
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 3.9e-21 105.9 126 47.6
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 3.1e-18 96.3 143 39.2
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.4e-15 87.4 87 49.4
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 7.0e-15 85.1 141 33.3
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 9.2e-15 84.7 111 36.9
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.7e-13 80.5 143 35.7
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 7.3e-12 75.1 137 35.8
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.1e-11 73.6 185 28.6
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.1e-10 71.2 134 34.3
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 1.4e-10 70.9 104 40.4
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 3.1e-10 69.7 111 42.3
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 9.8e-09 64.7 109 38.5
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 4.9e-08 62.4 139 28.1
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 4.9e-08 62.4 68 47.1


User provided reference genes

Program Settings