Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G152 Amborella trichopoda HOM05D004145 ORTHO05D004879 0.0e+00 1379.8 735 100.0
Nn2g12613 Nelumbo nucifera HOM05D004145 ORTHO05D004879 6.6e-262 907.5 731 67.3
Dinv09830 Davidia involucrata HOM05D004145 ORTHO05D004879 4.4e-242 841.6 725 63.9
Atru.chr2.638 Acer truncatum HOM05D004145 ORTHO05D004879 9.9e-242 840.5 725 61.9
GSVIVG01026774001 Vitis vinifera HOM05D004145 ORTHO05D004879 2.7e-239 832.4 725 63.0
TWI56G0710 Tripterygium wilfordii HOM05D004145 ORTHO05D004879 1.3e-238 830.1 719 60.9
CSS0025723 Camellia sinensis var. sinensis HOM05D004145 ORTHO05D004879 1.7e-238 829.7 724 61.9
Actinidia30923 Actinidia chinensis HOM05D004145 ORTHO05D004879 2.5e-237 825.9 725 62.2
Peaxi162Scf00225g00424 Petunia axillaris HOM05D004145 ORTHO05D004879 2.5e-237 825.9 749 60.2
RcHm_v2.0_Chr6g0273391 Rosa chinensis HOM05D004145 ORTHO05D004879 4.3e-237 825.1 725 61.1
CSS0045127 Camellia sinensis var. sinensis HOM05D004145 ORTHO05D004879 9.6e-237 823.9 724 60.5
Aqoxy2G04020 Aquilegia oxysepala HOM05D004145 ORTHO05D004879 1.6e-236 823.2 728 63.6
Ciclev10019027m.g Citrus clementina HOM05D004145 ORTHO05D004879 2.0e-234 816.2 731 60.3
Sc16g0010400 Simmondsia chinensis HOM05D004145 ORTHO05D004879 3.4e-234 815.5 729 60.2
Nitab4.5_0010351g0020 Nicotiana tabacum HOM05D004145 ORTHO05D004879 1.3e-233 813.5 724 61.5
TWI12G1275 Tripterygium wilfordii HOM05D004145 ORTHO05D004879 8.4e-233 810.8 721 61.6
CDE05G0178 Ceratophyllum demersum HOM05D004145 ORTHO05D004879 4.2e-232 808.5 727 60.7
Hma1.2p1_1636F.1_g294830 Hydrangea macrophylla HOM05D004145 ORTHO05D004879 1.2e-231 807.0 723 61.5
CAN.G134.208 Capsicum annuum HOM05D004145 ORTHO05D004879 2.1e-231 806.2 732 60.4
FvH4_2g12670 Fragaria vesca HOM05D004145 ORTHO05D004879 2.7e-231 805.8 725 61.5
FAN27G3237 Fragaria x ananassa HOM05D004145 ORTHO05D004879 3.5e-231 805.4 725 61.5
Dinv04277 Davidia involucrata HOM05D004145 ORTHO05D004879 1.3e-230 803.5 670 65.2
FAN15G1727 Fragaria x ananassa HOM05D004145 ORTHO05D004879 1.3e-230 803.5 725 61.4
THA.LOC104805832 Tarenaya hassleriana HOM05D004145 ORTHO05D004879 1.5e-229 800.0 726 55.1
PGR004G0092 Punica granatum HOM05D004145 ORTHO05D004879 1.9e-229 799.7 730 60.0
Gohir.D13G104600 Gossypium hirsutum HOM05D004145 ORTHO05D004879 3.3e-229 798.9 735 58.8
Thecc.05G254300 Theobroma cacao HOM05D004145 ORTHO05D004879 9.6e-229 797.3 730 60.0
Gorai.013G117100 Gossypium raimondii HOM05D004145 ORTHO05D004879 2.1e-228 796.2 735 58.6
Gohir.A13G101100 Gossypium hirsutum HOM05D004145 ORTHO05D004879 1.1e-227 793.9 735 58.5
QL03p001164 Quercus lobata HOM05D004145 ORTHO05D004879 1.8e-227 793.1 725 59.4
VMungo0540G0740 Vigna mungo HOM05D004145 ORTHO05D004879 4.5e-226 788.5 728 58.9
Prupe.6G335900 Prunus persica HOM05D004145 ORTHO05D004879 7.6e-226 787.7 728 59.8
Sopen01g041760 Solanum pennellii HOM05D004145 ORTHO05D004879 9.9e-226 787.3 731 60.5
Solyc01g098180.3 Solanum lycopersicum HOM05D004145 ORTHO05D004879 6.4e-225 784.6 731 60.2
Potri.005G045200 Populus trichocarpa HOM05D004145 ORTHO05D004879 3.2e-224 782.3 730 59.7
Manes.09G159400 Manihot esculenta HOM05D004145 ORTHO05D004879 7.1e-224 781.2 725 59.7
MSTRG.2685 Avicennia marina HOM05D004145 ORTHO05D004879 9.3e-224 780.8 726 59.8
FAN24G1676 Fragaria x ananassa HOM05D004145 ORTHO05D004879 1.2e-223 780.4 778 57.2
Cc02_g32210 Coffea canephora HOM05D004145 ORTHO05D004879 1.6e-223 780.0 708 60.0
PSO017G5505 Papaver somniferum HOM05D004145 ORTHO05D004879 1.0e-222 777.3 726 59.8
vmacro06192 Vaccinium macrocarpon HOM05D004145 ORTHO05D004879 1.0e-222 777.3 783 55.9
Sed0004488 Sechium edule HOM05D004145 ORTHO05D004879 5.1e-222 775.0 728 58.7
MELO3C004345.2 Cucumis melo HOM05D004145 ORTHO05D004879 8.7e-222 774.2 727 58.9
Migut.H01121 Erythranthe guttata HOM05D004145 ORTHO05D004879 9.6e-221 770.8 722 58.2
SGA_v2.0_scaffold80G25752 Striga asiatica HOM05D004145 ORTHO05D004879 9.6e-221 770.8 747 58.4
CsaV3_2G004470 Cucumis sativus L. HOM05D004145 ORTHO05D004879 2.8e-220 769.2 727 58.7
PSO675G1731 Papaver somniferum HOM05D004145 ORTHO05D004879 4.8e-220 768.5 730 59.3
Lalb_Chr15g0076981 Lupinus albus HOM05D004145 ORTHO05D004879 6.2e-220 768.1 719 57.6
Glyma.03G243100 Glycine max HOM05D004145 ORTHO05D004879 8.1e-220 767.7 728 57.8
HanXRQChr15g0469811 Helianthus annuus HOM05D004145 ORTHO05D004879 1.1e-219 767.3 721 56.7
Medtr7g115610 Medicago truncatula HOM05D004145 ORTHO05D004879 3.1e-219 765.8 720 56.9
CANSAT54G2505 Cannabis sativa HOM05D004145 ORTHO05D004879 6.9e-219 764.6 727 59.3
MD00G1051200 Malus domestica HOM05D004145 ORTHO05D004879 6.9e-219 764.6 738 56.8
Ca_12868_v3 Cicer arietinum L. HOM05D004145 ORTHO05D004879 5.8e-218 761.5 725 57.2
COL.COLO4_36032 Corchorus olitorius HOM05D004145 ORTHO05D004879 1.3e-217 760.4 696 60.8
Lsat_1_v5_gn_6_96941 Lactuca sativa HOM05D004145 ORTHO05D004879 2.2e-217 759.6 721 56.7
RcHm_v2.0_Chr2g0129391 Rosa chinensis HOM05D004145 ORTHO05D004879 2.2e-217 759.6 725 57.8
Sp4g17260 Schrenkiella parvula HOM05D004145 ORTHO05D004879 4.9e-217 758.4 731 57.6
A05p10730 Brassica napus HOM05D004145 ORTHO05D004879 3.2e-216 755.7 731 57.6
BraA05t20017Z Brassica rapa HOM05D004145 ORTHO05D004879 3.2e-216 755.7 731 57.6
Eucgr.H04421 Eucalyptus grandis HOM05D004145 ORTHO05D004879 5.5e-216 755.0 726 58.4
EL10Ac4g09963 Beta vulgaris HOM05D004145 ORTHO05D004879 3.5e-215 752.3 750 55.7
MD12G1232500 Malus domestica HOM05D004145 ORTHO05D004879 3.5e-215 752.3 726 58.4
BolC4t22972H Brassica oleracea HOM05D004145 ORTHO05D004879 7.9e-215 751.1 731 57.2
Phvul.006G097200 Phaseolus vulgaris HOM05D004145 ORTHO05D004879 1.6e-212 743.4 728 55.5
Hund07348 Selenicereus undatus HOM05D004145 ORTHO05D004879 2.1e-212 743.0 852 51.5
Lj5g0001865 Lotus japonicus HOM05D004145 ORTHO05D004879 2.8e-212 742.7 718 55.4
ECA246G2136 Erigeron canadensis HOM05D004145 ORTHO05D004879 4.8e-212 741.9 722 57.1
Aa31sc654G10 Aethionema arabicum HOM05D004145 ORTHO05D004879 6.2e-212 741.5 730 56.6
Thhalv10016297m.g Eutrema salsugineum HOM05D004145 ORTHO05D004879 6.2e-212 741.5 723 57.4
ClCG07G016490 Citrullus lanatus HOM05D004145 ORTHO05D004879 1.1e-211 740.7 725 57.1
Os02g0812400 Oryza sativa ssp. japonica HOM05D004145 ORTHO05D004879 1.1e-211 740.7 713 56.2
CARHR129130 Cardamine hirsuta HOM05D004145 ORTHO05D004879 2.6e-210 736.1 733 56.1
C04p13820 Brassica napus HOM05D004145 ORTHO05D004879 3.4e-210 735.7 731 56.5
Carub.0004s1666 Capsella rubella HOM05D004145 ORTHO05D004879 1.7e-209 733.4 731 56.2
Oeu028497.4 Olea europaea HOM05D004145 ORTHO05D004879 1.9e-208 729.9 704 56.8
AUR62006653 Chenopodium quinoa HOM05D004145 ORTHO05D004879 2.5e-208 729.6 717 58.4
AT2G34970 Arabidopsis thaliana HOM05D004145 ORTHO05D004879 3.2e-208 729.2 731 55.4
AL4G30980 Arabidopsis lyrata HOM05D004145 ORTHO05D004879 7.9e-207 724.5 731 55.7
Nitab4.5_0000245g0100 Nicotiana tabacum HOM05D004145 ORTHO05D004879 1.3e-206 723.8 952 46.8
AUR62000308 Chenopodium quinoa HOM05D004145 ORTHO05D004879 1.8e-206 723.4 790 54.6
Haze_04291 Corylus avellana HOM05D004145 ORTHO05D004879 1.1e-205 720.7 745 56.4
arahy.Tifrunner.gnm1.ann1.N9EJ2X Arachis hypogaea HOM05D004145 ORTHO05D004879 7.4e-205 718.0 739 54.9
TPR.G33341 Trifolium pratense HOM05D004145 ORTHO05D004879 3.4e-202 709.1 727 55.6
arahy.Tifrunner.gnm1.ann1.Q65QWU Arachis hypogaea HOM05D004145 ORTHO05D004879 7.6e-202 708.0 721 55.2
Mapoly0056s0115 Marchantia polymorpha HOM05D004145 ORTHO05D004879 1.7e-201 706.8 728 54.8
Zm00001eb258570 Zea mays HOM05D004145 ORTHO05D004879 8.5e-201 704.5 714 53.2
FAN20G3151 Fragaria x ananassa HOM05D004145 ORTHO05D004879 6.7e-198 694.9 743 55.2
unitig_748.g8566 Utricularia gibba HOM05D004145 ORTHO05D004879 4.5e-194 682.2 728 55.1
DCAR_006415 Daucus carota HOM05D004145 ORTHO05D004879 1.8e-190 670.2 649 57.9
SMO356G0330 Selaginella moellendorffii HOM05D004145 ORTHO05D004879 2.6e-189 666.4 728 53.3
Pp3c1_20030 Physcomitrium patens HOM05D004145 ORTHO05D004879 3.3e-189 666.0 741 52.4
Ah.06g195470 Amaranthus hybridus HOM05D004145 ORTHO05D004879 4.4e-189 665.6 728 53.4
Rhsim03G0245100 Rhododendron simsii HOM05D004145 ORTHO05D004879 7.7e-186 654.8 712 54.9
BcaB02g09494 Brassica carinata HOM05D004145 ORTHO05D004879 1.0e-185 654.4 682 54.8
HPP92_016926 Vanilla planifolia HOM05D004145 ORTHO05D004879 2.9e-185 652.9 712 51.3
BcaB02g09493 Brassica carinata HOM05D004145 ORTHO05D004879 3.8e-185 652.5 677 51.3
Haze_14654 Corylus avellana HOM05D004145 ORTHO05D004879 3.0e-182 642.9 647 58.6
Carub.0007s2297 Capsella rubella HOM05D004145 ORTHO05D004879 4.8e-180 635.6 733 50.6
AL7G36090 Arabidopsis lyrata HOM05D004145 ORTHO05D004879 1.3e-177 627.5 735 51.3
AT4G18300 Arabidopsis thaliana HOM05D004145 ORTHO05D004879 2.5e-176 623.2 733 50.9
FvH4_4g24061 Fragaria vesca HOM05D004145 ORTHO05D004879 1.9e-168 597.0 733 50.1
RcHm_v2.0_Chr4g0430791 Rosa chinensis HOM05D004145 ORTHO05D004879 1.2e-162 577.8 724 50.1
Cpa.g.sc117.30 Carica papaya HOM05D004145 ORTHO05D004879 5.9e-162 575.5 452 71.2
CiPaw.13G133200 Carya illinoinensis HOM05D004145 ORTHO05D004879 1.5e-160 570.9 544 56.6
Sabra16G0314500 Salix brachista HOM05D004145 ORTHO05D004879 1.0e-158 564.7 643 48.5
AagrBONN_evm.TU.Sc2ySwM_228.295 Anthoceros agrestis HOM05D004145 ORTHO05D004879 1.3e-156 557.8 691 50.1
Glyma.19G240600 Glycine max HOM05D004145 ORTHO05D004879 2.8e-156 556.6 448 66.1
FAN17G0778 Fragaria x ananassa HOM05D004145 ORTHO05D004879 6.3e-156 555.4 732 47.5
AT3G02270 Arabidopsis thaliana HOM05D004145 ORTHO05D004879 6.1e-151 538.9 728 46.8
Lj9A674T60 Lonicera japonica HOM05D004145 ORTHO05D004879 4.9e-148 529.3 441 65.8
PSO541G4045 Papaver somniferum HOM05D004145 ORTHO05D004879 1.4e-147 527.7 723 47.3
PSO675G6749 Papaver somniferum HOM05D004145 ORTHO05D004879 2.7e-138 496.9 732 45.4
MD17G1228000 Malus domestica HOM05D004145 ORTHO05D004879 4.1e-131 473.0 525 52.6
BcaB06g28815 Brassica carinata HOM05D004145 ORTHO05D004879 1.3e-129 468.0 500 55.0
SHI18260 Sapria himalayana HOM05D004145 ORTHO05D004879 3.0e-129 466.8 451 59.6
PRCOL_00001177 Prasinoderma coloniale HOM05D004145 ORTHO05D004879 7.3e-128 462.2 728 41.5
BcaC02g07743 Brassica carinata HOM05D004145 ORTHO05D006843 9.5e-128 461.8 578 44.8
BcaC02g11578 Brassica carinata HOM05D004145 ORTHO05D004879 1.6e-127 461.1 364 63.2
ECA246G4181 Erigeron canadensis HOM05D004145 ORTHO05D004879 5.3e-110 402.9 713 38.7
CBR_g23483 Chara braunii HOM05D004145 ORTHO05D004879 1.5e-109 401.4 890 35.4
MCO16G505 Micromonas commoda HOM05D004145 ORTHO05D004879 2.9e-108 397.1 815 37.7
FvH4_4g24260 Fragaria vesca HOM05D004145 ORTHO05D004879 1.4e-107 394.8 634 43.7
Sabra16G0314400 Salix brachista HOM05D004145 ORTHO05D004879 1.4e-107 394.8 637 38.9
Psat0s1551g0320 Pisum sativum HOM05D004145 ORTHO05D004879 1.2e-106 391.7 462 52.4
FAN07G1263 Fragaria x ananassa HOM05D000016 ORTHO05D004879 6.2e-103 379.4 603 43.6
MBI12_g33070_MAGBIO Magnolia biondii HOM05D004145 ORTHO05D004879 6.2e-103 379.4 266 70.3
Cre12.g502200 Chlamydomonas reinhardtii HOM05D004145 ORTHO05D004879 4.6e-98 363.2 817 35.9
PSO339G4752 Papaver somniferum HOM05D004145 ORTHO05D004879 3.8e-92 343.6 756 34.5
AL3G11540 Arabidopsis lyrata HOM05D004145 ORTHO05D004879 2.4e-86 324.3 345 50.7
Sabra19G0021200 Salix brachista HOM05D004145 ORTHO05D004879 2.4e-86 324.3 416 45.2
Eucgr.L03047 Eucalyptus grandis HOM05D004145 ORTHO05D004879 1.4e-83 315.1 326 50.0
Lsat_1_v5_gn_3_33301 Lactuca sativa HOM05D004145 ORTHO05D004879 2.6e-69 267.7 253 55.3
TAR365G0486 Trochodendron aralioides HOM05D004145 ORTHO05D004879 1.3e-68 265.4 254 55.9
GSVIVG01032341001 Vitis vinifera HOM05D004145 ORTHO05D004879 8.5e-68 262.7 194 69.6
Haze_00048 Corylus avellana HOM05D000222 ORTHO05D004879 2.0e-64 251.5 186 66.1
BcaB06g28816 Brassica carinata HOM05D004145 ORTHO05D004879 1.4e-62 245.4 218 59.2
GSVIVG01032295001 Vitis vinifera HOM05D004145 ORTHO05D004879 9.1e-62 242.7 162 75.3
Cpa.g.sc117.31 Carica papaya HOM05D004145 ORTHO05D004879 1.0e-57 229.2 241 49.4
BolC4t27888H Brassica oleracea HOM05D004145 ORTHO05D004879 5.3e-54 216.9 347 37.5
SEGI_02297 Sequoiadendron giganteum HOM05D004145 ORTHO05D004879 5.2e-49 200.3 148 64.9
Psat0s1551g0280 Pisum sativum HOM05D004145 ORTHO05D004879 1.6e-45 188.7 133 72.9
HPP92_016860 Vanilla planifolia HOM05D004145 ORTHO05D004879 2.1e-42 178.3 121 76.0
Dinv01337 Davidia involucrata HOM05D004145 ORTHO05D004879 2.8e-39 167.9 124 67.7
TPR.G28883 Trifolium pratense HOM05D004145 ORTHO05D004879 4.7e-34 150.6 110 69.1
GSVIVG01032326001 Vitis vinifera HOM05D004145 ORTHO05D004879 1.4e-33 149.1 83 78.3
GSVIVG01032340001 Vitis vinifera HOM05D004145 ORTHO05D004879 3.1e-33 147.9 83 77.1
SEGI_16626 Sequoiadendron giganteum HOM05D004145 ORTHO05D004879 8.3e-31 139.8 157 61.1
CARHR178030 Cardamine hirsuta HOM05D004145 ORTHO05D004879 3.2e-30 137.9 112 58.9
SEGI_02151 Sequoiadendron giganteum HOM05D004145 ORTHO05D004879 1.4e-25 122.5 91 63.7
SEGI_03238 Sequoiadendron giganteum HOM05D004145 ORTHO05D004879 5.2e-25 120.6 146 49.3
HPP92_016859 Vanilla planifolia HOM05D004145 ORTHO05D004879 6.8e-25 120.2 275 32.7
GSVIVG01032294001 Vitis vinifera HOM05D004145 ORTHO05D004879 7.8e-21 106.7 63 71.4
TPR.G33351 Trifolium pratense HOM05D004145 ORTHO05D004879 2.3e-20 105.1 73 69.9
MBI12_g33072_MAGBIO Magnolia biondii HOM05D004145 ORTHO05D004879 6.6e-20 103.6 64 73.4
Medtr6g023790 Medicago truncatula HOM05D004145 ORTHO05D004879 1.2e-18 99.4 150 40.0
CARHR177970 Cardamine hirsuta HOM05D004145 ORTHO05D004879 1.8e-17 95.5 170 38.8
MBI12_g44852_MAGBIO Magnolia biondii HOM05D004145 ORTHO05D004879 1.2e-16 92.8 87 52.9
MBI12_g35199_MAGBIO Magnolia biondii HOM05D004145 ORTHO05D004879 1.7e-15 89.0 70 60.0
TPR.G20882 Trifolium pratense HOM05D004145 ORTHO05D004879 3.0e-12 78.2 66 63.6
Psat0s2291g0040 Pisum sativum HOM05D004145 ORTHO05D004879 6.6e-12 77.0 88 42.0
SalBow6G4600 Salvia bowleyana HOM05D004145 ORTHO05D004879 1.1e-11 76.3 56 66.1
Glyma.11G150600 Glycine max HOM05D004145 ORTHO05D004879 1.5e-08 65.9 92 40.2
CBR_g54067 Chara braunii HOM05D005230 ORTHO05D006506 4.4e-08 64.3 249 24.5
Cre03.g207825 Chlamydomonas reinhardtii HOM05D005230 ORTHO05D006506 4.4e-08 64.3 244 23.4
SMO117G0151 Selaginella moellendorffii HOM05D005230 ORTHO05D006506 2.9e-07 61.6 362 21.8
Psat0s2215g0200 Pisum sativum HOM05D004426 ORTHO05D005417 3.8e-07 61.2 35 71.4
Migut.D00707 Erythranthe guttata HOM05D005230 ORTHO05D006506 6.4e-07 60.5 406 22.4
Psat2g053520 Pisum sativum HOM05D004426 ORTHO05D005417 6.4e-07 60.5 35 71.4
Cpa.g.sc34.203 Carica papaya HOM05D005230 ORTHO05D006506 1.1e-06 59.7 319 22.6
Psat6g150080 Pisum sativum HOM05D004426 ORTHO05D005417 3.2e-06 58.2 35 65.7
TPR.G28885 Trifolium pratense HOM05D004145 ORTHO05D004879 4.2e-06 57.8 48 47.9
BNapus_Darmor_BZH_scaffold_38p02380 Brassica napus HOM05D005230 ORTHO05D006506 5.4e-06 57.4 327 22.6
PRCOL_00006600 Prasinoderma coloniale HOM05D005230 ORTHO05D006506 9.3e-06 56.6 227 22.9


User provided reference genes

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