Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 3.7e-111 404.8 194 100.0
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 3.6e-58 228.8 192 62.0
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 4.0e-57 225.3 195 60.5
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 8.8e-57 224.2 196 61.7
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 1.2e-56 223.8 195 62.1
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 3.7e-55 218.8 191 61.8
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 3.7e-55 218.8 191 61.8
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 6.3e-55 218.0 197 59.9
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.4e-54 216.9 195 61.5
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 5.4e-54 214.9 139 77.7
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 7.0e-54 214.5 201 57.2
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.2e-53 213.8 197 58.9
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.2e-53 213.8 197 58.9
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.0e-53 213.0 197 58.9
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 2.0e-53 213.0 197 60.9
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 7.7e-53 211.1 195 59.5
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 1.3e-52 210.3 168 66.1
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 1.3e-52 210.3 192 58.3
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 8.6e-52 207.6 195 59.0
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 8.6e-52 207.6 134 73.1
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 1.9e-51 206.5 197 57.9
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 1.9e-51 206.5 152 67.8
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 2.5e-51 206.1 191 57.6
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 3.3e-51 205.7 152 67.8
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 3.3e-51 205.7 134 74.6
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 4.3e-51 205.3 194 57.2
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 4.3e-51 205.3 194 57.7
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 4.3e-51 205.3 138 72.5
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.6e-51 204.9 195 57.4
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 9.5e-51 204.1 194 56.2
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 9.5e-51 204.1 198 57.6
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 9.5e-51 204.1 147 69.4
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 1.2e-50 203.8 192 58.3
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 1.2e-50 203.8 195 57.9
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 1.6e-50 203.4 193 58.0
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 2.8e-50 202.6 188 59.6
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 2.8e-50 202.6 133 71.4
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 3.6e-50 202.2 195 56.9
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 3.6e-50 202.2 188 59.6
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 6.1e-50 201.4 188 59.6
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 6.1e-50 201.4 188 59.6
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 8.0e-50 201.1 195 60.0
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 8.0e-50 201.1 195 60.5
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 1.0e-49 200.7 125 77.6
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 1.4e-49 200.3 197 57.9
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 1.4e-49 200.3 189 57.7
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 1.8e-49 199.9 192 57.3
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 1.8e-49 199.9 187 56.1
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 1.8e-49 199.9 162 65.4
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 4.0e-49 198.7 192 57.3
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 8.9e-49 197.6 156 67.9
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 8.9e-49 197.6 142 69.7
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 3.4e-48 195.7 131 74.0
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 4.4e-48 195.3 192 54.7
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 9.8e-48 194.1 194 56.7
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 1.7e-47 193.4 150 64.7
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 2.2e-47 193.0 192 55.7
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 2.9e-47 192.6 188 56.9
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 3.7e-47 192.2 195 55.9
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 4.9e-47 191.8 191 53.4
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 8.3e-47 191.0 187 56.1
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.1e-46 190.7 188 57.4
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 1.8e-46 189.9 194 54.6
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 3.2e-46 189.1 195 55.9
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 9.2e-46 187.6 120 75.8
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 3.5e-45 185.7 141 66.7
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 7.8e-45 184.5 199 54.3
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 1.0e-44 184.1 147 68.0
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 1.0e-44 184.1 199 54.3
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 1.7e-44 183.3 195 57.9
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 1.7e-44 183.3 132 66.7
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 1.7e-44 183.3 132 66.7
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 3.0e-44 182.6 188 55.9
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 5.0e-44 181.8 119 72.3
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 6.6e-44 181.4 131 65.6
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 8.6e-44 181.0 162 59.9
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 8.6e-44 181.0 184 56.0
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 8.6e-44 181.0 162 59.9
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 1.1e-43 180.6 139 65.5
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 1.5e-43 180.3 187 52.4
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 1.9e-43 179.9 168 57.7
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 3.3e-43 179.1 165 60.0
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 3.3e-43 179.1 164 59.1
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 3.3e-43 179.1 164 59.1
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 4.3e-43 178.7 167 60.5
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 4.3e-43 178.7 161 58.4
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 4.3e-43 178.7 161 58.4
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 9.5e-43 177.6 122 72.1
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 2.1e-42 176.4 171 57.3
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 2.1e-42 176.4 125 68.0
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 2.8e-42 176.0 119 73.1
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 2.8e-42 176.0 170 57.1
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 3.6e-42 175.6 165 59.4
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 4.7e-42 175.3 187 53.5
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 6.2e-42 174.9 170 57.6
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 3.4e-40 169.1 120 71.7
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 4.4e-40 168.7 114 71.1
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 1.3e-39 167.2 141 59.6
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 1.2e-37 160.6 118 64.4
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 3.6e-34 149.1 187 47.1
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.8e-33 146.7 153 51.6
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 1.5e-32 143.7 129 56.6
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 4.7e-26 122.1 84 66.7
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 2.2e-23 113.2 68 85.3
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 7.1e-22 108.2 122 47.5
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 1.7e-20 103.6 96 53.1
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 2.3e-20 103.2 129 46.5
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 6.6e-20 101.7 109 46.8
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 4.7e-18 95.5 81 60.5
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 4.0e-09 65.9 61 62.3
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 1.9e-06 57.0 114 37.7
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 2.4e-06 56.6 182 28.0


User provided reference genes

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