Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 1.8e-207 725.7 374 100.0
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 2.5e-140 502.7 384 66.9
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 6.8e-138 494.6 387 66.7
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 4.4e-137 491.9 381 66.4
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 5.7e-137 491.5 381 66.4
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 9.8e-137 490.7 389 64.5
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 9.8e-137 490.7 381 66.1
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 2.8e-136 489.2 381 65.4
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 8.3e-136 487.6 287 79.1
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 1.4e-135 486.9 384 63.3
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.8e-135 486.5 321 73.2
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 1.8e-135 486.5 345 68.4
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 1.8e-135 486.5 318 74.5
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 5.4e-135 485.0 315 73.7
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 5.4e-135 485.0 348 71.6
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 7.0e-135 484.6 288 80.9
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 9.1e-135 484.2 288 81.2
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.2e-134 483.8 372 64.2
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 1.6e-134 483.4 345 69.0
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 1.6e-134 483.4 385 64.2
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 2.0e-134 483.0 287 79.4
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 2.0e-134 483.0 337 69.7
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 3.5e-134 482.3 288 80.9
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 7.7e-134 481.1 287 77.7
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 1.0e-133 480.7 287 78.0
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 1.0e-133 480.7 287 78.0
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.3e-133 479.6 384 62.2
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.9e-133 479.2 321 72.0
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 5.0e-133 478.4 322 70.8
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 5.0e-133 478.4 287 78.7
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 6.6e-133 478.0 382 63.9
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 1.5e-132 476.9 375 62.7
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 2.5e-132 476.1 289 77.5
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 2.5e-132 476.1 349 67.3
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 5.5e-132 474.9 288 78.8
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 5.5e-132 474.9 354 66.1
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 7.2e-132 474.6 388 62.4
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 7.2e-132 474.6 323 73.1
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 7.2e-132 474.6 388 62.6
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 9.5e-132 474.2 387 62.3
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 3.6e-131 472.2 287 77.4
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 3.6e-131 472.2 287 79.1
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 3.6e-131 472.2 367 64.3
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 4.7e-131 471.9 289 76.5
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 4.7e-131 471.9 341 66.6
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 6.1e-131 471.5 287 76.7
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 6.1e-131 471.5 287 77.4
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 6.1e-131 471.5 385 64.2
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.4e-130 470.3 287 76.7
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 1.8e-130 469.9 384 62.8
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.8e-130 469.9 287 77.4
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 2.3e-130 469.5 287 75.6
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 3.0e-130 469.2 287 74.9
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 3.0e-130 469.2 287 76.0
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 8.9e-130 467.6 287 75.6
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 1.2e-129 467.2 371 62.3
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 1.5e-129 466.8 377 63.9
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 2.0e-129 466.5 355 63.9
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 2.0e-129 466.5 355 63.9
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 2.0e-129 466.5 384 62.5
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 3.4e-129 465.7 382 62.0
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 4.4e-129 465.3 380 61.6
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 4.4e-129 465.3 287 74.2
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 5.7e-129 464.9 371 62.5
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 5.7e-129 464.9 287 74.2
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 7.5e-129 464.5 287 74.6
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 7.5e-129 464.5 287 73.9
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 7.5e-129 464.5 287 74.9
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 7.5e-129 464.5 287 76.3
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 9.8e-129 464.2 287 74.6
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 1.7e-128 463.4 287 74.6
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.7e-128 463.4 287 74.2
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 2.8e-128 462.6 287 76.0
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.8e-128 462.6 287 76.0
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.8e-128 462.6 287 76.0
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 4.9e-128 461.8 287 76.0
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 4.9e-128 461.8 290 75.5
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 6.3e-128 461.5 287 75.6
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 8.3e-128 461.1 375 62.1
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 8.3e-128 461.1 288 74.7
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.2e-126 457.2 287 73.2
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 1.6e-126 456.8 377 60.7
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 2.0e-126 456.4 386 61.1
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 2.7e-126 456.1 287 74.9
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 5.9e-126 454.9 288 73.6
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 5.9e-126 454.9 287 72.8
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 7.8e-126 454.5 433 56.1
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 2.3e-125 453.0 280 76.1
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 2.9e-125 452.6 287 73.5
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 1.6e-123 446.8 285 71.9
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 5.2e-122 441.8 415 58.3
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.6e-118 430.3 335 64.5
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.6e-118 430.3 287 66.9
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 2.0e-118 429.9 383 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 8.6e-117 424.5 287 68.3
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 4.3e-116 422.2 373 57.6
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.6e-115 420.2 287 66.9
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 3.6e-115 419.1 257 75.9
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 4.7e-115 418.7 287 67.2
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 8.0e-115 417.9 287 71.1
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.1e-114 417.5 287 66.6
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 1.2e-113 414.1 287 65.9
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 4.4e-113 412.1 289 66.8
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 5.4e-111 405.2 229 83.4
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.0e-109 401.0 345 60.0
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 8.1e-99 364.8 407 50.9
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 1.2e-89 334.3 188 82.4
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 2.0e-89 333.6 288 57.3
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 4.9e-88 328.9 224 73.2
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 3.1e-82 309.7 215 67.0
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 1.3e-75 287.7 244 62.3
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 4.0e-74 282.7 266 58.3
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 5.3e-74 282.3 280 54.6
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 9.0e-74 281.6 289 54.0
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 6.4e-72 275.4 214 64.0
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 1.0e-69 268.1 287 51.6
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.0e-45 186.8 242 46.3
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 3.7e-19 100.1 93 51.6
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.5e-15 87.4 63 61.9
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 6.1e-14 82.8 156 38.5
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 1.4e-13 81.6 156 38.5
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 3.9e-08 63.5 36 72.2


User provided reference genes

Program Settings