Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0561G109 Amborella trichopoda HOM05D022953 ORTHO05D001630 9.5e-71 270.0 131 100.0
ATR0564G502 Amborella trichopoda HOM05D022953 ORTHO05D001630 2.8e-54 215.3 120 89.2
ATR0184G034 Amborella trichopoda HOM05D022953 ORTHO05D001630 4.4e-52 208.0 117 88.0
ATR0561G211 Amborella trichopoda HOM05D022953 ORTHO05D001630 2.1e-49 199.1 118 84.7
ATR1096G151 Amborella trichopoda HOM05D022953 ORTHO05D062920 2.8e-30 135.6 70 92.9
Sed0022838 Sechium edule HOM05D000531 ORTHO05D001630 3.0e-08 62.4 43 62.8
Medtr3g010660 Medicago truncatula HOM05D000531 ORTHO05D001630 8.7e-08 60.8 43 58.1
Sed0014567 Sechium edule HOM05D000531 ORTHO05D001630 8.7e-08 60.8 55 52.7
MBI19_g34003_MAGBIO Magnolia biondii HOM05D000531 ORTHO05D001630 2.5e-07 59.3 43 58.1
FvH4_7g04850 Fragaria vesca HOM05D000531 ORTHO05D001630 3.3e-07 58.9 43 58.1
FAN01G2617 Fragaria x ananassa HOM05D000531 ORTHO05D001630 3.3e-07 58.9 43 58.1
FAN06G4705 Fragaria x ananassa HOM05D000531 ORTHO05D001630 3.3e-07 58.9 43 58.1
Lalb_Chr01g0007601 Lupinus albus HOM05D000531 ORTHO05D001630 3.3e-07 58.9 82 37.8
Sabra10G0193700 Salix brachista HOM05D000531 ORTHO05D001630 3.3e-07 58.9 43 55.8
Ciclev10001893m.g Citrus clementina HOM05D000531 ORTHO05D001630 5.7e-07 58.2 52 48.1
Glyma.04G124200 Glycine max HOM05D000531 ORTHO05D001630 5.7e-07 58.2 43 55.8
Prupe.2G056800 Prunus persica HOM05D000531 ORTHO05D001630 5.7e-07 58.2 43 58.1
CiPaw.13G048600 Carya illinoinensis HOM05D000531 ORTHO05D001630 7.4e-07 57.8 65 41.5
Psat4g141680 Pisum sativum HOM05D000531 ORTHO05D001630 7.4e-07 57.8 68 41.2
TPR.G5132 Trifolium pratense HOM05D000531 ORTHO05D001630 7.4e-07 57.8 82 35.4
Glyma.08G227000 Glycine max HOM05D000531 ORTHO05D001630 9.7e-07 57.4 66 45.5
PSO339G0899 Papaver somniferum HOM05D000531 ORTHO05D001630 9.7e-07 57.4 65 43.1
PSO384G4223 Papaver somniferum HOM05D000531 ORTHO05D001630 9.7e-07 57.4 65 43.1
Potri.008G010800 Populus trichocarpa HOM05D000531 ORTHO05D001630 9.7e-07 57.4 43 55.8
Potri.010G248100 Populus trichocarpa HOM05D000531 ORTHO05D001630 9.7e-07 57.4 43 55.8
QL04p051667 Quercus lobata HOM05D000531 ORTHO05D001630 9.7e-07 57.4 65 41.5
Sabra08G0006500 Salix brachista HOM05D000531 ORTHO05D001630 9.7e-07 57.4 43 55.8
ClCG08G008570 Citrullus lanatus HOM05D000531 ORTHO05D001630 1.3e-06 57.0 43 55.8
MELO3C019925.2 Cucumis melo HOM05D000531 ORTHO05D001630 1.3e-06 57.0 43 55.8
CsaV3_6G004560 Cucumis sativus L. HOM05D000531 ORTHO05D001630 1.3e-06 57.0 43 55.8
FAN03G3134 Fragaria x ananassa HOM05D000531 ORTHO05D001630 1.3e-06 57.0 43 55.8
FAN10G3375 Fragaria x ananassa HOM05D000531 ORTHO05D001630 1.3e-06 57.0 43 55.8
MBI13_g00560_MAGBIO Magnolia biondii HOM05D000531 ORTHO05D001630 1.3e-06 57.0 62 41.9
MD02G1266800 Malus domestica HOM05D000531 ORTHO05D001630 1.3e-06 57.0 43 55.8
Psat5g225680 Pisum sativum HOM05D000531 ORTHO05D001630 1.3e-06 57.0 42 57.1
Sabra10G0193500 Salix brachista HOM05D000531 ORTHO05D001630 1.3e-06 57.0 43 55.8
TAR636G0470 Trochodendron aralioides HOM05D000531 ORTHO05D001630 1.3e-06 57.0 43 55.8
Ca_14175_v3 Cicer arietinum L. HOM05D000531 ORTHO05D001630 1.6e-06 56.6 43 55.8
THA.LOC104821606 Tarenaya hassleriana HOM05D000531 ORTHO05D001630 1.6e-06 56.6 43 53.5
RcHm_v2.0_Chr1g0330441 Rosa chinensis HOM05D000531 ORTHO05D001630 2.2e-06 56.2 43 55.8
Atru.chr12.1118 Acer truncatum HOM05D000531 ORTHO05D001630 2.8e-06 55.8 42 57.1
Manes.18G048100 Manihot esculenta HOM05D000531 ORTHO05D001630 2.8e-06 55.8 43 53.5
TWI15G1242 Tripterygium wilfordii HOM05D000531 ORTHO05D001630 2.8e-06 55.8 45 53.3
Glyma.06G314400 Glycine max HOM05D000531 ORTHO05D001630 3.7e-06 55.5 43 53.5
Lalb_Chr19g0132611 Lupinus albus HOM05D000531 ORTHO05D001630 3.7e-06 55.5 40 60.0
Nn7g37256 Nelumbo nucifera HOM05D000531 ORTHO05D001630 3.7e-06 55.5 61 42.6
TAR633G1290 Trochodendron aralioides HOM05D000531 ORTHO05D001630 3.7e-06 55.5 43 53.5
VMungo1127G0147 Vigna mungo HOM05D000531 ORTHO05D001630 3.7e-06 55.5 43 55.8
MD07G1052500 Malus domestica HOM05D000531 ORTHO05D001630 6.3e-06 54.7 43 53.5
Phvul.011G186800 Phaseolus vulgaris HOM05D000531 ORTHO05D001630 6.3e-06 54.7 43 53.5
QL07p015590 Quercus lobata HOM05D000531 ORTHO05D001630 6.3e-06 54.7 71 35.2
CSS0046145 Camellia sinensis var. sinensis HOM05D000531 ORTHO05D001630 8.2e-06 54.3 51 47.1
Eucgr.J00320 Eucalyptus grandis HOM05D000531 ORTHO05D001630 8.2e-06 54.3 74 41.9


User provided reference genes

Program Settings