Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 5.6e-171 604.4 345 100.0
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 2.6e-27 127.1 403 32.5
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 1.2e-24 118.2 406 32.0
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 2.1e-24 117.5 406 32.3
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 2.7e-24 117.1 175 45.1
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.3e-23 114.8 356 32.9
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.8e-23 114.4 355 35.2
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 3.9e-23 113.2 158 44.9
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 5.1e-23 112.8 363 30.3
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 5.1e-23 112.8 172 44.8
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 5.1e-23 112.8 174 47.7
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 8.7e-23 112.1 435 29.9
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 8.7e-23 112.1 423 30.3
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 1.9e-22 110.9 184 39.1
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 2.5e-22 110.5 163 41.7
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 3.3e-22 110.2 188 39.9
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 3.3e-22 110.2 177 41.8
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 4.3e-22 109.8 170 41.2
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 4.3e-22 109.8 180 41.7
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 5.6e-22 109.4 170 40.0
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 7.4e-22 109.0 171 42.1
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 2.1e-21 107.5 173 43.4
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 2.1e-21 107.5 391 28.9
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.8e-21 107.1 188 38.3
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 3.7e-21 106.7 180 41.7
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 6.2e-21 105.9 182 40.1
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 8.2e-21 105.5 159 49.1
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 8.2e-21 105.5 186 45.7
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 8.2e-21 105.5 159 49.1
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 1.1e-20 105.1 163 40.5
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.4e-20 104.8 174 40.8
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 1.8e-20 104.4 160 40.6
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.8e-20 104.4 159 49.7
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 4.0e-20 103.2 160 43.8
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 9.0e-20 102.1 424 29.0
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 9.0e-20 102.1 183 43.2
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 9.0e-20 102.1 181 39.2
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 9.0e-20 102.1 181 39.2
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 9.0e-20 102.1 168 42.9
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 1.2e-19 101.7 159 42.8
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 1.2e-19 101.7 175 37.7
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 1.2e-19 101.7 159 47.2
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 1.2e-19 101.7 181 37.6
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.5e-19 101.3 177 44.6
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 3.4e-19 100.1 178 40.4
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 4.5e-19 99.8 158 42.4
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 4.5e-19 99.8 447 28.6
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 5.8e-19 99.4 158 41.1
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 5.8e-19 99.4 158 39.9
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 5.8e-19 99.4 179 38.5
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 5.8e-19 99.4 171 43.3
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 7.6e-19 99.0 174 40.2
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 7.6e-19 99.0 174 40.2
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.7e-18 97.8 159 37.1
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.7e-18 97.8 160 40.0
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 2.9e-18 97.1 154 46.1
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 3.8e-18 96.7 291 33.3
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 3.8e-18 96.7 172 40.7
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 3.8e-18 96.7 155 36.8
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 6.5e-18 95.9 179 40.2
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 6.5e-18 95.9 176 39.2
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 6.5e-18 95.9 186 36.0
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 6.5e-18 95.9 147 40.1
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 8.4e-18 95.5 183 36.6
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 1.1e-17 95.1 175 37.7
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 1.1e-17 95.1 172 37.8
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 1.4e-17 94.7 165 38.8
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 1.9e-17 94.4 383 27.9
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 2.5e-17 94.0 243 34.2
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 3.2e-17 93.6 432 29.6
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 4.2e-17 93.2 161 42.2
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 4.2e-17 93.2 348 28.7
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 4.2e-17 93.2 147 40.1
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 5.5e-17 92.8 154 44.2
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 7.1e-17 92.4 386 31.3
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 1.2e-16 91.7 373 29.5
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.6e-16 91.3 149 40.9
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.6e-16 91.3 162 38.3
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.6e-16 91.3 186 38.7
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 2.1e-16 90.9 153 42.5
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 3.5e-16 90.1 190 37.4
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 3.5e-16 90.1 175 38.3
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 3.5e-16 90.1 185 37.3
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 7.9e-16 89.0 181 40.3
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 7.9e-16 89.0 440 30.0
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 1.0e-15 88.6 160 39.4
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.0e-15 88.6 415 28.0
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 1.8e-15 87.8 410 29.0
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 2.3e-15 87.4 160 38.8
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 3.0e-15 87.0 415 28.2
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 8.7e-15 85.5 372 26.6
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 8.7e-15 85.5 180 38.3
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 8.7e-15 85.5 175 37.1
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 8.7e-15 85.5 416 28.4
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 1.1e-14 85.1 159 35.2
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 1.5e-14 84.7 158 34.8
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 1.5e-14 84.7 446 25.1
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.5e-14 84.7 166 36.1
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 1.9e-14 84.3 159 40.9
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.9e-14 84.3 149 38.9
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 2.5e-14 84.0 156 37.2
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 4.3e-14 83.2 153 37.3
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 4.3e-14 83.2 153 37.3
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 5.7e-14 82.8 158 38.0
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 5.7e-14 82.8 158 36.7
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 1.6e-13 81.3 159 35.2
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 1.6e-13 81.3 156 34.0
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 2.2e-13 80.9 414 28.3
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 2.8e-13 80.5 349 29.2
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 6.3e-13 79.3 414 28.3
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 6.3e-13 79.3 414 28.3
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 8.2e-13 79.0 161 35.4
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 2.4e-12 77.4 398 26.9
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 6.9e-12 75.9 378 28.0
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 1.5e-11 74.7 150 36.7
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 3.4e-11 73.6 160 35.6
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 7.6e-11 72.4 156 31.4
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 1.3e-10 71.6 157 31.8
ClCG09G008640 Citrullus lanatus HOM05D005417 ORTHO05D002591 2.5e-09 67.4 330 28.2
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 5.5e-09 66.2 342 26.9
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 7.2e-09 65.9 157 31.2
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 9.3e-09 65.5 170 35.3
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 1.6e-08 64.7 45 64.4
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 3.6e-08 63.5 438 26.7
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 3.9e-07 60.1 162 36.4
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 1.1e-06 58.5 334 27.5
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 1.1e-06 58.5 355 28.5
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 2.5e-06 57.4 88 42.0


User provided reference genes

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