Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0561G052 Amborella trichopoda HOM05D000657 ORTHO05D002092 5.5e-38 161.0 116 100.0
ATR0598G296 Amborella trichopoda HOM05D000657 ORTHO05D002092 7.5e-11 70.9 48 70.8
ATR0796G335 Amborella trichopoda HOM05D000657 ORTHO05D002092 4.8e-10 68.2 48 68.8
Oeu053604.1 Olea europaea HOM05D000657 ORTHO05D002092 2.0e-08 62.8 48 64.6
COL.COLO4_23327 Corchorus olitorius HOM05D000657 ORTHO05D002092 3.5e-08 62.0 48 64.6
Actinidia25808 Actinidia chinensis HOM05D000657 ORTHO05D002092 4.5e-08 61.6 48 64.6
SalBow6G2161 Salvia bowleyana HOM05D000657 ORTHO05D002092 4.5e-08 61.6 48 64.6
Gorai.008G144200 Gossypium raimondii HOM05D000657 ORTHO05D002092 5.9e-08 61.2 48 64.6
HPP92_010679 Vanilla planifolia HOM05D000657 ORTHO05D002092 5.9e-08 61.2 48 62.5
CiPaw.01G027800 Carya illinoinensis HOM05D000657 ORTHO05D002092 1.0e-07 60.5 48 62.5
Migut.N01511 Erythranthe guttata HOM05D000657 ORTHO05D002092 1.0e-07 60.5 48 64.6
FvH4_2g25910 Fragaria vesca HOM05D000657 ORTHO05D002092 1.0e-07 60.5 48 62.5
FAN15G1975 Fragaria x ananassa HOM05D000657 ORTHO05D002092 1.0e-07 60.5 48 62.5
FAN20G2253 Fragaria x ananassa HOM05D000657 ORTHO05D002092 1.0e-07 60.5 48 62.5
FAN24G3483 Fragaria x ananassa HOM05D000657 ORTHO05D002092 1.0e-07 60.5 48 62.5
Gohir.D12G133300 Gossypium hirsutum HOM05D000657 ORTHO05D002092 1.0e-07 60.5 48 64.6
CAN.G472.17 Capsicum annuum HOM05D000657 ORTHO05D002092 1.3e-07 60.1 48 64.6
Solyc09g075280.2 Solanum lycopersicum HOM05D000657 ORTHO05D002092 1.3e-07 60.1 71 49.3
CSS0017483 Camellia sinensis var. sinensis HOM05D000657 ORTHO05D002092 2.3e-07 59.3 48 60.4
CSS0031963 Camellia sinensis var. sinensis HOM05D000657 ORTHO05D002092 2.3e-07 59.3 48 60.4
CSS0037234 Camellia sinensis var. sinensis HOM05D000657 ORTHO05D002092 2.3e-07 59.3 48 60.4
Gohir.A12G129500 Gossypium hirsutum HOM05D000657 ORTHO05D002092 2.9e-07 58.9 48 62.5
Lj2P1197T40 Lonicera japonica HOM05D000657 ORTHO05D002092 2.9e-07 58.9 48 62.5
SGA_v2.0_scaffold36G14337 Striga asiatica HOM05D000657 ORTHO05D002092 2.9e-07 58.9 48 60.4
CiPaw.08G094100 Carya illinoinensis HOM05D000657 ORTHO05D002092 3.8e-07 58.5 48 58.3
Cc01_g21000 Coffea canephora HOM05D000657 ORTHO05D002092 3.8e-07 58.5 48 62.5
Peaxi162Scf00001g00402 Petunia axillaris HOM05D000657 ORTHO05D002092 3.8e-07 58.5 48 62.5
RcHm_v2.0_Chr6g0294231 Rosa chinensis HOM05D000657 ORTHO05D002092 3.8e-07 58.5 48 60.4
Sopen09g030070 Solanum pennellii HOM05D000657 ORTHO05D002092 3.8e-07 58.5 48 62.5
CANSAT25G2454 Cannabis sativa HOM05D000657 ORTHO05D002092 5.0e-07 58.2 48 58.3
ECA236G1902 Erigeron canadensis HOM05D000657 ORTHO05D002092 5.0e-07 58.2 48 60.4
HanXRQChr04g0114821 Helianthus annuus HOM05D000657 ORTHO05D002092 5.0e-07 58.2 48 60.4
Sed0013016 Sechium edule HOM05D000657 ORTHO05D002092 5.0e-07 58.2 48 60.4
GSVIVG01028035001 Vitis vinifera HOM05D000657 ORTHO05D002092 5.0e-07 58.2 48 60.4
MSTRG.18142 Avicennia marina HOM05D000657 ORTHO05D002092 6.6e-07 57.8 48 60.4
CSS0023789 Camellia sinensis var. sinensis HOM05D000657 ORTHO05D002092 6.6e-07 57.8 48 60.4
MSTRG.17400 Avicennia marina HOM05D000657 ORTHO05D002092 8.6e-07 57.4 48 58.3
Ciclev10024146m.g Citrus clementina HOM05D000657 ORTHO05D002092 8.6e-07 57.4 48 60.4
DCAR_002847 Daucus carota HOM05D000657 ORTHO05D002092 8.6e-07 57.4 48 62.5
Rhsim01G0286500 Rhododendron simsii HOM05D000657 ORTHO05D002092 8.6e-07 57.4 48 58.3
vmacro18655 Vaccinium macrocarpon HOM05D000657 ORTHO05D002092 8.6e-07 57.4 48 58.3
Hma1.2p1_0494F.1_g165310 Hydrangea macrophylla HOM05D000657 ORTHO05D002092 1.1e-06 57.0 48 58.3
Lsat_1_v5_gn_8_163840 Lactuca sativa HOM05D000657 ORTHO05D002092 1.1e-06 57.0 48 60.4
Lj1g0020883 Lotus japonicus HOM05D000657 ORTHO05D002092 1.1e-06 57.0 48 56.2
Lalb_Chr15g0078471 Lupinus albus HOM05D000657 ORTHO05D002092 1.1e-06 57.0 48 56.2
Prupe.8G263500 Prunus persica HOM05D000657 ORTHO05D002092 1.1e-06 57.0 48 60.4
Cpa.g.sc151.13 Carica papaya HOM05D000657 ORTHO05D002092 1.5e-06 56.6 48 58.3
Duzib138G0691 Durio zibethinus HOM05D000657 ORTHO05D002092 1.5e-06 56.6 48 58.3
Nitab4.5_0000116g0470 Nicotiana tabacum HOM05D000657 ORTHO05D002092 1.5e-06 56.6 48 60.4
Nitab4.5_0006459g0020 Nicotiana tabacum HOM05D000657 ORTHO05D002092 1.5e-06 56.6 48 60.4
QL12p028253 Quercus lobata HOM05D000657 ORTHO05D002092 1.5e-06 56.6 48 60.4
Sabra02G0156200 Salix brachista HOM05D000657 ORTHO05D002092 1.5e-06 56.6 48 56.2
arahy.Tifrunner.gnm1.ann1.415NE5 Arachis hypogaea HOM05D000657 ORTHO05D002092 1.9e-06 56.2 48 54.2
MD11G1308000 Malus domestica HOM05D000657 ORTHO05D002092 1.9e-06 56.2 48 58.3
PGR119G1516 Punica granatum HOM05D000657 ORTHO05D002092 1.9e-06 56.2 48 56.2
SHI15128 Sapria himalayana HOM05D000657 ORTHO05D002092 1.9e-06 56.2 48 58.3
Sed0022619 Sechium edule HOM05D000657 ORTHO05D002092 1.9e-06 56.2 48 58.3
Thecc.01G303000 Theobroma cacao HOM05D000657 ORTHO05D002092 2.5e-06 55.8 48 58.3
TAR636G0591 Trochodendron aralioides HOM05D000657 ORTHO05D002092 2.5e-06 55.8 48 60.4
Atru.chr5.1125 Acer truncatum HOM05D000657 ORTHO05D002092 3.3e-06 55.5 48 58.3
Duzib211G0324 Durio zibethinus HOM05D000657 ORTHO05D002092 3.3e-06 55.5 48 56.2
PSO210G7374 Papaver somniferum HOM05D000657 ORTHO05D002092 3.3e-06 55.5 48 58.3
PSO832G3192 Papaver somniferum HOM05D000657 ORTHO05D002092 3.3e-06 55.5 48 58.3
Ca_09180_v3 Cicer arietinum L. HOM05D000657 ORTHO05D002092 4.2e-06 55.1 48 52.1
Ca_30607_v3 Cicer arietinum L. HOM05D000657 ORTHO05D002092 4.2e-06 55.1 48 52.1
ClCG09G005670 Citrullus lanatus HOM05D000657 ORTHO05D002092 4.2e-06 55.1 48 56.2
MELO3C000736.2 Cucumis melo HOM05D000657 ORTHO05D029186 4.2e-06 55.1 48 56.2
CsaV3_7G029390 Cucumis sativus L. HOM05D000657 ORTHO05D002092 4.2e-06 55.1 48 56.2
Gohir.D11G118900 Gossypium hirsutum HOM05D000657 ORTHO05D002092 4.2e-06 55.1 48 58.3
Gorai.007G127400 Gossypium raimondii HOM05D000657 ORTHO05D002092 4.2e-06 55.1 48 58.3
Medtr7g108785 Medicago truncatula HOM05D000657 ORTHO05D002092 4.2e-06 55.1 48 52.1
Psat3g021680 Pisum sativum HOM05D000657 ORTHO05D002092 4.2e-06 55.1 48 52.1
TPR.G9601 Trifolium pratense HOM05D000657 ORTHO05D002092 4.2e-06 55.1 48 52.1
Eucgr.H01100 Eucalyptus grandis HOM05D000657 ORTHO05D002092 5.5e-06 54.7 48 60.4
Aqoxy5G00768 Aquilegia oxysepala HOM05D000657 ORTHO05D002092 7.2e-06 54.3 48 56.2
MD03G1290500 Malus domestica HOM05D000657 ORTHO05D002092 7.2e-06 54.3 48 56.2
Phvul.001G208100 Phaseolus vulgaris HOM05D000657 ORTHO05D002092 7.2e-06 54.3 48 52.1
Potri.002G203200 Populus trichocarpa HOM05D000657 ORTHO05D002092 7.2e-06 54.3 48 56.2
THA.LOC104825966 Tarenaya hassleriana HOM05D000657 ORTHO05D002092 9.5e-06 53.9 48 54.2


User provided reference genes

Program Settings