Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0560G003 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.5e-109 399.4 194 100.0
ATR0691G134 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.5e-99 365.5 193 91.7
ATR0194G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.5e-96 356.3 193 89.6
ATR0661G336 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.2e-95 352.4 193 89.6
ATR0792G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.8e-94 349.4 189 90.5
ATR0964G004 Amborella trichopoda HOM05D004345 ORTHO05D005192 3.1e-94 348.6 189 90.5
ATR0446G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.2e-64 250.4 130 93.8
ATR1192G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 5.0e-36 155.2 76 97.4
Ah.01g012750 Amaranthus hybridus HOM05D004345 ORTHO05D005192 5.8e-16 88.6 182 31.3
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 1.1e-14 84.3 198 33.3
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 1.9e-14 83.6 188 31.4
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 1.6e-13 80.5 185 32.4
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 3.5e-13 79.3 185 30.8
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 4.6e-13 79.0 185 30.8
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 4.6e-13 79.0 185 30.8
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 6.0e-13 78.6 185 33.0
MBI07_g44810_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 3.0e-12 76.3 195 31.8
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 3.9e-12 75.9 175 33.1
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 6.6e-12 75.1 176 32.4
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 1.1e-11 74.3 168 32.7
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 1.5e-11 73.9 188 31.4
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 1.9e-11 73.6 181 32.6
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 1.9e-11 73.6 194 28.4
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 1.9e-11 73.6 188 31.4
EL10Ac9g22980 Beta vulgaris HOM05D000200 ORTHO05D001546 2.5e-11 73.2 194 29.4
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 2.5e-11 73.2 185 29.7
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 4.3e-11 72.4 182 32.4
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 7.3e-11 71.6 188 31.4
Lsat_1_v5_gn_8_70480 Lactuca sativa HOM05D004345 ORTHO05D005192 1.3e-10 70.9 191 30.9
PSO407G0063 Papaver somniferum HOM05D004345 ORTHO05D005192 1.3e-10 70.9 178 32.6
CDE12G0342 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 1.6e-10 70.5 145 33.1
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 2.1e-10 70.1 185 30.8
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 2.1e-10 70.1 187 33.2
PSO210G0382 Papaver somniferum HOM05D004345 ORTHO05D005192 6.2e-10 68.6 178 30.9
PSO210G0907 Papaver somniferum HOM05D004345 ORTHO05D005192 6.2e-10 68.6 178 30.3
QL07p001298 Quercus lobata HOM05D004345 ORTHO05D005192 8.1e-10 68.2 188 29.3
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 1.1e-09 67.8 176 31.8
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 1.4e-09 67.4 194 31.4
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 1.4e-09 67.4 194 31.4
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 1.8e-09 67.0 178 32.0
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 1.8e-09 67.0 186 32.8
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 1.8e-09 67.0 196 32.1
SHI21683 Sapria himalayana HOM05D004345 ORTHO05D005192 2.4e-09 66.6 181 30.4
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 4.0e-09 65.9 186 30.6
Aqoxy4G01527 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 5.3e-09 65.5 179 29.1
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 1.5e-08 63.9 177 30.5
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 2.6e-08 63.2 188 30.9
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 2.6e-08 63.2 188 30.9
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 3.4e-08 62.8 189 27.0
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 4.5e-08 62.4 194 28.9
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 5.8e-08 62.0 197 28.4
AL3G31560 Arabidopsis lyrata HOM05D004345 ORTHO05D005192 7.6e-08 61.6 191 29.8
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 7.6e-08 61.6 185 29.2
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 9.9e-08 61.2 182 29.7
ECA238G4368 Erigeron canadensis HOM05D004345 ORTHO05D005192 9.9e-08 61.2 177 29.4
HanXRQChr07g0196981 Helianthus annuus HOM05D004345 ORTHO05D005192 9.9e-08 61.2 173 30.6
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 9.9e-08 61.2 119 36.1
Carub.0003s1810 Capsella rubella HOM05D004345 ORTHO05D005192 1.3e-07 60.8 149 33.6
AUR62032951 Chenopodium quinoa HOM05D004345 ORTHO05D005192 1.3e-07 60.8 174 27.6
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 1.3e-07 60.8 190 27.4
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 2.2e-07 60.1 197 28.4
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 2.2e-07 60.1 193 29.5
ECA234G4090 Erigeron canadensis HOM05D004345 ORTHO05D005192 2.9e-07 59.7 158 31.6
Ah.03g148550 Amaranthus hybridus HOM05D004345 ORTHO05D005192 3.8e-07 59.3 153 26.1
Duzib116G0224 Durio zibethinus HOM05D004345 ORTHO05D005192 3.8e-07 59.3 147 32.7
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 3.8e-07 59.3 190 28.4
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 4.9e-07 58.9 182 29.1
COL.COLO4_14552 Corchorus olitorius HOM05D004345 ORTHO05D005192 4.9e-07 58.9 151 33.1
Cpa.g.sc3060.1 Carica papaya HOM05D004345 ORTHO05D005192 6.4e-07 58.5 188 28.7
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 6.4e-07 58.5 177 28.8
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 6.4e-07 58.5 190 27.9
Aa31LG8G3600 Aethionema arabicum HOM05D004345 ORTHO05D005192 1.9e-06 57.0 154 29.9
AT3G18310 Arabidopsis thaliana HOM05D004345 ORTHO05D005192 3.2e-06 56.2 189 27.5
THA.LOC104803578 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 3.2e-06 56.2 154 31.8
C05p47630 Brassica napus HOM05D004345 ORTHO05D005192 4.2e-06 55.8 154 30.5
BolC5t33472H Brassica oleracea HOM05D004345 ORTHO05D005192 4.2e-06 55.8 153 31.4
CARHR093680 Cardamine hirsuta HOM05D004345 ORTHO05D005192 4.2e-06 55.8 192 31.2
SEGI_03816 Sequoiadendron giganteum HOM05D004345 ORTHO05D005192 5.4e-06 55.5 187 29.4
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 5.4e-06 55.5 190 27.4
Lj8C411T10 Lonicera japonica HOM05D004345 ORTHO05D005192 9.3e-06 54.7 181 28.2
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 9.3e-06 54.7 177 27.7
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 9.3e-06 54.7 190 26.3


User provided reference genes

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