Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0559G372 Amborella trichopoda HOM05D002924 ORTHO05D003122 6.2e-69 264.2 155 100.0
ATR1098G148 Amborella trichopoda HOM05D002924 ORTHO05D003122 3.4e-35 152.1 161 64.6
Gohir.A10G041900 Gossypium hirsutum HOM05D002924 ORTHO05D003122 4.2e-09 65.5 132 43.2
Gohir.D10G042800 Gossypium hirsutum HOM05D002924 ORTHO05D003122 5.5e-09 65.1 130 43.1
Gorai.011G045300 Gossypium raimondii HOM05D002924 ORTHO05D003122 1.6e-08 63.5 130 42.3
Gorai.009G154300 Gossypium raimondii HOM05D002924 ORTHO05D003122 1.8e-07 60.1 129 41.1
Nitab4.5_0001531g0050 Nicotiana tabacum HOM05D002924 ORTHO05D003122 2.3e-07 59.7 116 40.5
Duzib160G0328 Durio zibethinus HOM05D002924 ORTHO05D003122 3.9e-07 58.9 118 41.5
Glyma.08G096500 Glycine max HOM05D002924 ORTHO05D003122 5.1e-07 58.5 106 41.5
Gohir.A05G147700 Gossypium hirsutum HOM05D002924 ORTHO05D003122 1.1e-06 57.4 129 41.1
Nitab4.5_0009991g0010 Nicotiana tabacum HOM05D002924 ORTHO05D003122 1.5e-06 57.0 147 37.4
Gohir.D05G150200 Gossypium hirsutum HOM05D002924 ORTHO05D003122 2.0e-06 56.6 124 42.7
Thecc.06G148600 Theobroma cacao HOM05D002924 ORTHO05D003122 2.0e-06 56.6 109 45.0
COL.COLO4_31051 Corchorus olitorius HOM05D002924 ORTHO05D003122 2.5e-06 56.2 136 36.8
CsaV3_6G051810 Cucumis sativus L. HOM05D002924 ORTHO05D003122 2.5e-06 56.2 110 40.0
Gohir.D09G077300 Gossypium hirsutum HOM05D002924 ORTHO05D003122 2.5e-06 56.2 115 43.5
Gorai.006G092400 Gossypium raimondii HOM05D002924 ORTHO05D003122 2.5e-06 56.2 115 43.5
Psat1g194920 Pisum sativum HOM05D002924 ORTHO05D003122 2.5e-06 56.2 113 39.8
Sopen08g011370 Solanum pennellii HOM05D002924 ORTHO05D003122 2.5e-06 56.2 128 38.3
GSVIVG01007188001 Vitis vinifera HOM05D002924 ORTHO05D003122 2.5e-06 56.2 110 40.9
MELO3C007125.2 Cucumis melo HOM05D002924 ORTHO05D003122 3.3e-06 55.8 110 40.0
Duzib235G1474 Durio zibethinus HOM05D002924 ORTHO05D003122 3.3e-06 55.8 133 38.3
Gohir.A09G077300 Gossypium hirsutum HOM05D002924 ORTHO05D003122 3.3e-06 55.8 115 42.6
Lalb_Chr18g0055361 Lupinus albus HOM05D002924 ORTHO05D003122 5.7e-06 55.1 118 39.0
Medtr2g019190 Medicago truncatula HOM05D002924 ORTHO05D003122 5.7e-06 55.1 114 36.0
Solyc08g036620.4 Solanum lycopersicum HOM05D002924 ORTHO05D003122 5.7e-06 55.1 129 38.8
PGSC0003DMG400001178 Solanum tuberosum HOM05D002924 ORTHO05D003122 5.7e-06 55.1 129 38.8
Psat1g195000 Pisum sativum HOM05D002924 ORTHO05D003122 7.4e-06 54.7 113 39.8
TWI09G0754 Tripterygium wilfordii HOM05D002924 ORTHO05D003122 7.4e-06 54.7 132 37.9
QL05p059253 Quercus lobata HOM05D002924 ORTHO05D003122 9.7e-06 54.3 107 40.2


User provided reference genes

Program Settings