Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 5.8e-71 270.8 136 100.0
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 7.6e-39 164.1 135 65.2
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 4.9e-38 161.4 139 66.9
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 6.4e-38 161.0 139 66.9
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 8.4e-38 160.6 138 63.8
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 8.4e-38 160.6 124 67.7
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 1.4e-37 159.8 134 70.1
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 3.2e-37 158.7 124 63.7
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 3.2e-37 158.7 135 63.0
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 3.2e-37 158.7 103 75.7
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 4.2e-37 158.3 115 70.4
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 4.2e-37 158.3 90 86.7
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 5.5e-37 157.9 103 74.8
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 5.5e-37 157.9 90 85.6
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.6e-36 156.4 89 86.5
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 2.1e-36 156.0 90 83.3
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 3.5e-36 155.2 90 84.4
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 3.5e-36 155.2 89 82.0
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 3.5e-36 155.2 102 77.5
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 4.6e-36 154.8 94 78.7
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 4.6e-36 154.8 101 74.3
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 4.6e-36 154.8 120 66.7
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 4.6e-36 154.8 120 66.7
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 1.0e-35 153.7 94 78.7
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.3e-35 153.3 93 79.6
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 1.3e-35 153.3 120 65.8
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 1.8e-35 152.9 104 71.2
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 1.8e-35 152.9 104 73.1
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 1.8e-35 152.9 90 82.2
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 2.3e-35 152.5 94 78.7
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 2.3e-35 152.5 89 83.1
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 2.3e-35 152.5 89 80.9
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 3.0e-35 152.1 123 66.7
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 3.0e-35 152.1 89 80.9
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 3.0e-35 152.1 96 77.1
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 3.9e-35 151.8 133 62.4
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 5.1e-35 151.4 90 80.0
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 6.7e-35 151.0 135 60.7
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 6.7e-35 151.0 94 78.7
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 8.7e-35 150.6 87 83.9
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.1e-34 150.2 143 59.4
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 1.1e-34 150.2 87 82.8
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 1.5e-34 149.8 135 60.0
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.5e-34 149.8 99 75.8
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 1.5e-34 149.8 139 56.1
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.5e-34 149.8 111 69.4
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 1.9e-34 149.4 144 57.6
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.9e-34 149.4 141 58.2
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 2.5e-34 149.1 128 62.5
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 4.3e-34 148.3 90 78.9
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 4.3e-34 148.3 90 80.0
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 5.6e-34 147.9 111 68.5
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 5.6e-34 147.9 90 78.9
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 7.4e-34 147.5 90 78.9
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 9.6e-34 147.1 136 59.6
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.1e-33 146.0 101 72.3
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 2.8e-33 145.6 89 78.7
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.8e-33 145.6 89 78.7
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 3.7e-33 145.2 84 81.0
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 4.8e-33 144.8 114 64.0
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 4.8e-33 144.8 99 70.7
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 6.2e-33 144.4 85 80.0
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 6.2e-33 144.4 85 80.0
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 6.2e-33 144.4 114 65.8
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 6.2e-33 144.4 114 65.8
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 6.2e-33 144.4 89 77.5
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 6.2e-33 144.4 89 77.5
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 6.2e-33 144.4 95 72.6
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 6.2e-33 144.4 134 62.7
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 6.2e-33 144.4 137 56.9
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 8.2e-33 144.1 121 62.0
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 8.2e-33 144.1 136 58.8
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 8.2e-33 144.1 89 77.5
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 1.1e-32 143.7 114 64.9
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 1.1e-32 143.7 85 80.0
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 1.1e-32 143.7 107 70.1
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 1.1e-32 143.7 98 72.4
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 1.4e-32 143.3 85 82.4
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 1.4e-32 143.3 85 82.4
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.4e-32 143.3 89 77.5
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 1.4e-32 143.3 84 79.8
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 1.4e-32 143.3 82 84.1
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 1.4e-32 143.3 87 78.2
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.4e-32 143.3 84 76.2
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 1.8e-32 142.9 91 78.0
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 3.1e-32 142.1 108 65.7
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 6.9e-32 141.0 135 63.0
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 9.0e-32 140.6 103 69.9
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 9.0e-32 140.6 103 70.9
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 9.0e-32 140.6 82 84.1
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 1.2e-31 140.2 94 72.3
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 5.8e-31 137.9 84 72.6
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 5.8e-31 137.9 85 78.8
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 5.8e-31 137.9 136 57.4
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.0e-30 137.1 81 81.5
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 1.0e-30 137.1 82 75.6
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 3.8e-30 135.2 81 79.0
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 1.1e-29 133.7 85 75.3
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 5.5e-29 131.3 104 64.4
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 1.6e-28 129.8 113 61.1
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.6e-28 129.8 82 75.6
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.1e-26 123.6 85 69.4
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 2.1e-20 102.8 104 55.8
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 3.1e-16 89.0 46 84.8
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 9.1e-16 87.4 46 82.6
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 5.3e-08 61.6 39 76.9
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 5.3e-08 61.6 38 76.3


User provided reference genes

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