Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 4.1e-66 254.6 129 100.0
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 7.9e-54 213.8 129 79.8
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 2.3e-53 212.2 131 82.4
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 2.3e-53 212.2 129 81.4
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 5.2e-53 211.1 130 82.3
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 8.8e-53 210.3 130 81.5
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 1.1e-52 209.9 129 81.4
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.5e-52 209.5 130 80.8
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 1.5e-52 209.5 129 79.8
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.5e-52 209.5 129 83.7
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 2.6e-52 208.8 129 79.1
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 2.6e-52 208.8 131 80.9
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 2.6e-52 208.8 131 80.9
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 2.6e-52 208.8 131 80.9
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 2.6e-52 208.8 129 81.4
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 5.7e-52 207.6 131 80.2
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.7e-52 207.6 130 80.8
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.7e-52 207.6 130 80.8
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 7.4e-52 207.2 130 79.2
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 9.7e-52 206.8 131 80.2
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 9.7e-52 206.8 129 78.3
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 1.3e-51 206.5 133 79.7
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 1.3e-51 206.5 129 78.3
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.8e-51 205.3 130 79.2
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 2.8e-51 205.3 129 78.3
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 3.7e-51 204.9 129 79.8
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.7e-51 204.9 130 77.7
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 3.7e-51 204.9 130 79.2
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 8.2e-51 203.8 129 77.5
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 8.2e-51 203.8 130 77.7
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.1e-50 203.4 129 78.3
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 1.1e-50 203.4 128 74.2
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.1e-50 203.4 125 81.6
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 1.4e-50 203.0 129 78.3
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 1.8e-50 202.6 130 79.2
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.8e-50 202.6 130 78.5
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 1.8e-50 202.6 133 77.4
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 1.8e-50 202.6 130 76.9
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 1.8e-50 202.6 130 76.9
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 3.1e-50 201.8 129 79.8
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 3.1e-50 201.8 131 77.9
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 3.1e-50 201.8 130 77.7
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.1e-50 201.8 129 79.1
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 3.1e-50 201.8 129 78.3
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 3.1e-50 201.8 132 78.0
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 4.1e-50 201.4 133 76.7
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 4.1e-50 201.4 134 75.4
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 4.1e-50 201.4 130 76.9
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 5.3e-50 201.1 131 77.1
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 7.0e-50 200.7 129 77.5
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 7.0e-50 200.7 132 77.3
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 7.0e-50 200.7 130 76.9
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 7.0e-50 200.7 130 76.9
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 9.1e-50 200.3 131 77.9
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 9.1e-50 200.3 131 77.1
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 9.1e-50 200.3 129 75.2
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 1.2e-49 199.9 129 75.2
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 1.6e-49 199.5 134 78.4
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 1.6e-49 199.5 129 76.7
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 2.0e-49 199.1 132 75.0
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 2.0e-49 199.1 134 74.6
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 2.6e-49 198.7 131 80.9
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 3.5e-49 198.4 131 74.8
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 4.5e-49 198.0 131 74.0
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 4.5e-49 198.0 128 75.8
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 5.9e-49 197.6 133 75.9
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 7.7e-49 197.2 130 76.2
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 7.7e-49 197.2 128 76.6
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 7.7e-49 197.2 125 77.6
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.0e-48 196.8 132 75.8
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 1.3e-48 196.4 129 76.0
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 2.2e-48 195.7 129 77.5
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 2.2e-48 195.7 129 76.7
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 2.9e-48 195.3 129 75.2
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 2.9e-48 195.3 129 74.4
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 2.9e-48 195.3 134 74.6
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 3.8e-48 194.9 130 71.5
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 5.0e-48 194.5 121 76.0
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 5.0e-48 194.5 129 76.0
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 6.5e-48 194.1 130 73.1
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 6.5e-48 194.1 131 73.3
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 8.5e-48 193.7 129 73.6
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.1e-47 193.4 129 76.0
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 1.5e-47 193.0 130 73.8
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 1.9e-47 192.6 115 81.7
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 1.9e-47 192.6 115 81.7
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 5.5e-47 191.0 129 72.1
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 1.2e-46 189.9 130 71.5
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.6e-46 189.5 134 73.9
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.6e-46 189.5 129 73.6
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 2.1e-46 189.1 132 72.0
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 2.1e-46 189.1 129 71.3
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.1e-46 189.1 133 72.9
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 2.7e-46 188.7 130 71.5
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 2.7e-46 188.7 118 82.2
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 2.7e-46 188.7 129 75.2
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 6.1e-46 187.6 133 69.9
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 6.1e-46 187.6 129 71.3
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 6.1e-46 187.6 133 70.7
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 1.0e-45 186.8 129 69.8
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 1.4e-45 186.4 129 68.2
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.8e-45 186.0 133 69.9
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 1.8e-45 186.0 129 74.4
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 3.0e-45 185.3 130 73.1
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 3.0e-45 185.3 117 76.1
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 4.0e-45 184.9 129 70.5
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 4.0e-45 184.9 129 69.8
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 4.0e-45 184.9 121 75.2
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 6.7e-45 184.1 129 69.8
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 1.2e-44 183.3 134 70.1
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 1.2e-44 183.3 133 69.9
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.2e-44 183.3 130 72.3
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 1.2e-44 183.3 145 67.6
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 1.2e-44 183.3 129 68.2
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 1.5e-44 183.0 133 68.4
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 1.5e-44 183.0 133 69.2
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 1.5e-44 183.0 133 69.2
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.5e-44 183.0 130 72.3
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 1.5e-44 183.0 130 71.5
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 3.3e-44 181.8 133 69.2
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 3.3e-44 181.8 133 68.4
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 3.3e-44 181.8 133 68.4
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 4.4e-44 181.4 133 68.4
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 4.4e-44 181.4 117 73.5
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 4.4e-44 181.4 130 72.3
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 9.7e-44 180.3 130 70.0
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 1.3e-43 179.9 133 67.7
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 1.7e-43 179.5 134 67.2
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 3.7e-43 178.3 137 69.3
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 3.7e-43 178.3 131 64.1
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 4.8e-43 177.9 116 75.0
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 4.8e-43 177.9 134 66.4
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 4.8e-43 177.9 134 66.4
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 4.8e-43 177.9 131 71.8
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 6.3e-43 177.6 134 66.4
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 6.3e-43 177.6 134 66.4
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 6.3e-43 177.6 134 66.4
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 6.3e-43 177.6 132 68.2
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 3.1e-42 175.3 121 71.9
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 7.0e-42 174.1 125 72.0
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 4.5e-41 171.4 126 70.6
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 5.0e-40 167.9 121 70.2
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 4.2e-39 164.9 91 90.1
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 5.5e-39 164.5 129 62.0
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 7.2e-39 164.1 138 64.5
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 2.7e-38 162.2 130 60.0
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 3.6e-38 161.8 114 69.3
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 1.0e-37 160.2 126 64.3
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 3.4e-36 155.2 128 62.5
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 8.6e-32 140.6 116 60.3
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 8.3e-27 124.0 78 78.2
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.8e-26 122.9 85 74.1
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 1.6e-25 119.8 75 78.7
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.1e-23 113.6 72 76.4
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 2.5e-23 112.5 74 78.4
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 3.6e-22 108.6 73 74.0
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.2e-20 103.6 74 68.9
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 1.3e-19 100.1 56 89.3
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 3.7e-19 98.6 60 81.7
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.4e-18 96.7 77 62.3
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 1.8e-13 79.7 50 70.0
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 6.4e-11 71.2 95 36.8
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 2.7e-09 65.9 61 55.7
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 3.6e-06 55.5 50 62.0


User provided reference genes

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