Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0559G149 Amborella trichopoda HOM05D007750 ORTHO05D009803 3.0e-113 413.3 206 100.0
TAR623G1496 Trochodendron aralioides HOM05D007750 ORTHO05D009803 6.2e-34 149.8 197 42.1
Prupe.6G076800 Prunus persica HOM05D007750 ORTHO05D009803 8.9e-33 146.0 201 43.3
CiPaw.13G094000 Carya illinoinensis HOM05D007750 ORTHO05D009803 2.6e-32 144.4 200 40.0
RcHm_v2.0_Chr5g0064911 Rosa chinensis HOM05D007750 ORTHO05D009803 5.8e-32 143.3 200 41.0
GSVIVG01024955001 Vitis vinifera HOM05D007750 ORTHO05D009803 7.6e-32 142.9 201 40.8
CSS0037746 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 1.9e-30 138.3 207 37.2
Psat1g083360 Pisum sativum HOM05D007750 ORTHO05D009803 5.4e-30 136.7 205 38.0
Aa31LG9G10670 Aethionema arabicum HOM05D007750 ORTHO05D009803 7.1e-30 136.3 206 37.4
RcHm_v2.0_Chr5g0064671 Rosa chinensis HOM05D007750 ORTHO05D009803 7.1e-30 136.3 193 40.4
QL01p031803 Quercus lobata HOM05D007750 ORTHO05D009803 2.1e-29 134.8 206 37.9
CARHR254670 Cardamine hirsuta HOM05D007750 ORTHO05D009803 2.7e-29 134.4 200 38.0
MBI14_g36920_MAGBIO Magnolia biondii HOM05D002509 ORTHO05D002758 4.6e-29 133.7 203 39.9
Ca_04398_v3 Cicer arietinum L. HOM05D007750 ORTHO05D009803 6.0e-29 133.3 205 37.1
Haze_24099 Corylus avellana HOM05D007750 ORTHO05D009803 6.0e-29 133.3 206 39.8
Cfa011507 Carpinus fangiana HOM05D007750 ORTHO05D009803 1.0e-28 132.5 206 39.8
FAN16G0393 Fragaria x ananassa HOM05D007750 ORTHO05D009803 1.0e-28 132.5 193 37.8
Lj2g0016115 Lotus japonicus HOM05D007750 ORTHO05D009803 1.0e-28 132.5 206 37.4
Nn1g04208 Nelumbo nucifera HOM05D007750 ORTHO05D009803 1.0e-28 132.5 201 38.8
Gohir.D03G125600 Gossypium hirsutum HOM05D007750 ORTHO05D009803 1.7e-28 131.7 199 34.2
Carub.0006s3078 Capsella rubella HOM05D007750 ORTHO05D009803 2.3e-28 131.3 200 37.0
Gohir.A03G042099 Gossypium hirsutum HOM05D007750 ORTHO05D009803 2.3e-28 131.3 199 34.2
FAN21G3841 Fragaria x ananassa HOM05D007750 ORTHO05D009803 3.0e-28 131.0 193 37.3
FvH4_3g36170 Fragaria vesca HOM05D007750 ORTHO05D009803 3.9e-28 130.6 200 37.5
Gorai.003G131800 Gossypium raimondii HOM05D007750 ORTHO05D009803 6.6e-28 129.8 199 33.7
Lalb_Chr12g0196171 Lupinus albus HOM05D007750 ORTHO05D009803 6.6e-28 129.8 199 35.2
Sopen08g028580 Solanum pennellii HOM05D007750 ORTHO05D009803 1.5e-27 128.6 209 37.3
TPR.G7494 Trifolium pratense HOM05D007750 ORTHO05D009803 1.5e-27 128.6 205 37.6
CSS0028051 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 1.9e-27 128.3 183 37.2
Thhalv10028537m.g Eutrema salsugineum HOM05D007750 ORTHO05D009803 1.9e-27 128.3 199 35.7
Manes.02G132900 Manihot esculenta HOM05D007750 ORTHO05D009803 1.9e-27 128.3 201 37.8
FAN25G2068 Fragaria x ananassa HOM05D007750 ORTHO05D009803 2.5e-27 127.9 193 36.8
VMungo1215G1573 Vigna mungo HOM05D007750 ORTHO05D009803 2.5e-27 127.9 194 39.7
Phvul.003G091900 Phaseolus vulgaris HOM05D007750 ORTHO05D009803 3.3e-27 127.5 212 36.8
PGSC0003DMG400022754 Solanum tuberosum HOM05D007750 ORTHO05D009803 3.3e-27 127.5 209 36.8
CANSAT54G1947 Cannabis sativa HOM05D007750 ORTHO05D009803 4.3e-27 127.1 207 38.6
Sp6g05780 Schrenkiella parvula HOM05D007750 ORTHO05D009803 4.3e-27 127.1 197 36.0
arahy.Tifrunner.gnm1.ann1.T5BWJF Arachis hypogaea HOM05D007750 ORTHO05D009803 7.3e-27 126.3 197 38.6
Phvul.003G092000 Phaseolus vulgaris HOM05D007750 ORTHO05D009803 7.3e-27 126.3 204 37.7
FAN11G0214 Fragaria x ananassa HOM05D007750 ORTHO05D009803 1.6e-26 125.2 193 36.8
MD03G1092900 Malus domestica HOM05D007750 ORTHO05D009803 2.1e-26 124.8 197 36.5
Thecc.09G321000 Theobroma cacao HOM05D007750 ORTHO05D009803 2.8e-26 124.4 192 34.9
arahy.Tifrunner.gnm1.ann1.7C1NTJ Arachis hypogaea HOM05D007750 ORTHO05D009803 3.6e-26 124.0 193 38.3
THA.LOC104801704 Tarenaya hassleriana HOM05D007750 ORTHO05D009803 4.7e-26 123.6 198 36.4
Duzib150G0757 Durio zibethinus HOM05D007750 ORTHO05D009803 6.2e-26 123.2 201 33.8
Aqoxy496s001 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 1.1e-25 122.5 207 37.2
Aqoxy4G02931 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 1.1e-25 122.5 207 37.2
CAN.G981.43 Capsicum annuum HOM05D007750 ORTHO05D009803 1.1e-25 122.5 209 35.4
Medtr6g022260 Medicago truncatula HOM05D007750 ORTHO05D009803 1.4e-25 122.1 205 35.1
Aqoxy7G03815 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 1.8e-25 121.7 207 36.7
Migut.N02392 Erythranthe guttata HOM05D007750 ORTHO05D009803 5.2e-25 120.2 202 35.6
Cpa.g.sc81.142 Carica papaya HOM05D007750 ORTHO05D009803 9.0e-25 119.4 193 32.1
AT4G11690 Arabidopsis thaliana HOM05D007750 ORTHO05D009803 5.8e-24 116.7 201 34.8
Atru.chr3.3911 Acer truncatum HOM05D007750 ORTHO05D009803 1.7e-23 115.2 201 32.3
A09p27430 Brassica napus HOM05D007750 ORTHO05D009803 1.7e-23 115.2 199 33.7
BraA09t38312Z Brassica rapa HOM05D007750 ORTHO05D009803 2.2e-23 114.8 199 33.7
Glyma.07G217200 Glycine max HOM05D007750 ORTHO05D009803 1.9e-22 111.7 200 35.0
Glyma.06G033500 Glycine max HOM05D007750 ORTHO05D009803 2.4e-22 111.3 200 34.0
Potri.017G131600 Populus trichocarpa HOM05D007750 ORTHO05D009803 2.4e-22 111.3 200 35.5
Glyma.17G016400 Glycine max HOM05D007750 ORTHO05D009803 3.2e-22 110.9 200 35.5
C09p34750 Brassica napus HOM05D007750 ORTHO05D009803 1.6e-21 108.6 199 32.2
BolC9t56321H Brassica oleracea HOM05D007750 ORTHO05D009803 1.6e-21 108.6 199 32.2
SGA_v2.0_scaffold9G04983 Striga asiatica HOM05D007750 ORTHO05D009803 2.7e-21 107.8 204 32.4
SalBow3G4043 Salvia bowleyana HOM05D007750 ORTHO05D009803 4.6e-21 107.1 200 33.5
Cc01_g12900 Coffea canephora HOM05D007750 ORTHO05D009803 1.0e-20 105.9 203 32.0
Sc21g0005800 Simmondsia chinensis HOM05D007750 ORTHO05D009803 2.3e-20 104.8 203 35.0
Rhsim13G0082600 Rhododendron simsii HOM05D007750 ORTHO05D009803 4.3e-19 100.5 155 34.8
PGR083G0657 Punica granatum HOM05D007750 ORTHO05D009803 1.6e-18 98.6 202 33.7
Actinidia07034 Actinidia chinensis HOM05D007750 ORTHO05D009803 2.4e-17 94.7 189 33.3
Sabra17G0109600 Salix brachista HOM05D007750 ORTHO05D009803 1.5e-16 92.0 111 40.5
AUR62018631 Chenopodium quinoa HOM05D007750 ORTHO05D009803 1.7e-15 88.6 170 31.8
COL.COLO4_18513 Corchorus olitorius HOM05D007750 ORTHO05D009803 2.1e-13 81.6 201 28.4
Glyma.07G257600 Glycine max HOM05D007750 ORTHO05D009803 2.1e-13 81.6 200 31.5
BcaB01g01674 Brassica carinata HOM05D007750 ORTHO05D009803 2.7e-13 81.3 187 29.9
Lj1P153T20 Lonicera japonica HOM05D007750 ORTHO05D009803 1.5e-11 75.5 108 33.3
EL10Ac5g12003 Beta vulgaris HOM05D007750 ORTHO05D009803 4.8e-10 70.5 84 39.3
SalBow7G0144 Salvia bowleyana HOM05D007639 ORTHO05D009509 6.9e-09 66.6 200 28.0
Nitab4.5_0001714g0210 Nicotiana tabacum HOM05D007750 ORTHO05D009803 1.5e-08 65.5 84 38.1
MSTRG.1303 Avicennia marina HOM05D007639 ORTHO05D009509 2.6e-08 64.7 195 27.2
SalBow7G4426 Salvia bowleyana HOM05D007639 ORTHO05D009509 2.6e-08 64.7 200 27.0
AL6G46300 Arabidopsis lyrata HOM05D007750 ORTHO05D009803 4.5e-08 63.9 84 35.7
AL6G46430 Arabidopsis lyrata HOM05D007750 ORTHO05D009803 4.5e-08 63.9 84 35.7
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 4.5e-08 63.9 185 27.6
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 4.5e-08 63.9 197 27.4
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 7.6e-08 63.2 91 35.2
Nitab4.5_0007891g0010 Nicotiana tabacum HOM05D007750 ORTHO05D009803 7.6e-08 63.2 84 36.9
Hma1.2p1_0418F.1_g149220 Hydrangea macrophylla HOM05D007750 ORTHO05D009803 1.3e-07 62.4 57 47.4
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 2.9e-07 61.2 79 38.0
Lalb_Chr01g0006871 Lupinus albus HOM05D002453 ORTHO05D008746 2.9e-07 61.2 134 31.3
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 4.9e-07 60.5 195 27.7
SGA_v2.0_scaffold24G10272 Striga asiatica HOM05D007639 ORTHO05D009509 8.4e-07 59.7 188 26.6
Cc05_g10980 Coffea canephora HOM05D002453 ORTHO05D008746 1.9e-06 58.5 108 30.6
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 1.9e-06 58.5 200 26.5
ClCG09G016230 Citrullus lanatus HOM05D007750 ORTHO05D009803 2.4e-06 58.2 135 25.2
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 3.2e-06 57.8 79 36.7
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 4.2e-06 57.4 200 28.0
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 5.5e-06 57.0 79 35.4
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 5.5e-06 57.0 183 27.3
Eucgr.H02967 Eucalyptus grandis HOM05D007750 ORTHO05D009803 5.5e-06 57.0 80 40.0
Oeu014026.1 Olea europaea HOM05D000424 ORTHO05D000355 5.5e-06 57.0 102 29.4
CsaV3_2G032830 Cucumis sativus L. HOM05D000424 ORTHO05D000355 7.1e-06 56.6 124 27.4
Dinv18433 Davidia involucrata HOM05D005764 ORTHO05D006600 7.1e-06 56.6 197 25.4
Migut.L00762 Erythranthe guttata HOM05D007639 ORTHO05D009509 7.1e-06 56.6 182 28.0
FAN14G1284 Fragaria x ananassa HOM05D004255 ORTHO05D004815 7.1e-06 56.6 210 25.2
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 9.3e-06 56.2 79 35.4
CANSAT80G1535 Cannabis sativa HOM05D000424 ORTHO05D000355 9.3e-06 56.2 126 28.6
Oeu039576.1 Olea europaea HOM05D007455 ORTHO05D009431 9.3e-06 56.2 177 24.3
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 9.3e-06 56.2 132 31.1


User provided reference genes

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