Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0544G001 Amborella trichopoda HOM05D000645 ORTHO05D000494 9.5e-26 119.4 60 100.0
ATR0490G006 Amborella trichopoda HOM05D000645 ORTHO05D000494 1.2e-23 112.5 59 93.2
ATR0757G147 Amborella trichopoda HOM05D000645 ORTHO05D000494 6.4e-22 106.7 58 89.7
CSS0037027 Camellia sinensis var. sinensis HOM05D000645 ORTHO05D000494 6.2e-09 63.5 59 54.2
Manes.02G005100 Manihot esculenta HOM05D000645 ORTHO05D000494 6.2e-09 63.5 46 60.9
Nn3g18921 Nelumbo nucifera HOM05D000645 ORTHO05D000494 1.1e-08 62.8 44 61.4
MBI12_g15040_MAGBIO Magnolia biondii HOM05D000645 ORTHO05D000494 1.8e-08 62.0 44 61.4
MBI12_g43634_MAGBIO Magnolia biondii HOM05D000645 ORTHO05D000494 1.8e-08 62.0 44 61.4
vmacro11521 Vaccinium macrocarpon HOM05D000645 ORTHO05D000494 3.1e-08 61.2 54 55.6
MBI04_g35984_MAGBIO Magnolia biondii HOM05D000645 ORTHO05D000494 4.0e-08 60.8 58 51.7
TAR374G1617 Trochodendron aralioides HOM05D000645 ORTHO05D000494 4.0e-08 60.8 58 44.8
TAR629G2932 Trochodendron aralioides HOM05D000645 ORTHO05D000494 5.2e-08 60.5 43 60.5
Actinidia22191 Actinidia chinensis HOM05D000645 ORTHO05D000494 6.8e-08 60.1 53 52.8
Cpa.g.sc96.58 Carica papaya HOM05D000645 ORTHO05D000494 1.2e-07 59.3 67 44.8
COL.COLO4_06236 Corchorus olitorius HOM05D000645 ORTHO05D000494 1.2e-07 59.3 54 53.7
PSO170G5775 Papaver somniferum HOM05D000645 ORTHO05D000494 1.2e-07 59.3 44 56.8
Gohir.D07G141800 Gossypium hirsutum HOM05D000645 ORTHO05D000494 3.4e-07 57.8 44 56.8
Gorai.001G153400 Gossypium raimondii HOM05D000645 ORTHO05D000494 3.4e-07 57.8 44 56.8
Atru.chr5.707 Acer truncatum HOM05D000645 ORTHO05D000494 4.4e-07 57.4 44 54.5
Aqoxy7G00047 Aquilegia oxysepala HOM05D000645 ORTHO05D000494 5.8e-07 57.0 43 53.5
BcaC04g20361 Brassica carinata HOM05D000645 ORTHO05D000494 5.8e-07 57.0 54 48.1
BolC9t57323H Brassica oleracea HOM05D000645 ORTHO05D000494 5.8e-07 57.0 54 48.1
Thecc.01G339300 Theobroma cacao HOM05D000645 ORTHO05D000494 5.8e-07 57.0 44 54.5
Gohir.A07G136400 Gossypium hirsutum HOM05D000645 ORTHO05D000494 7.6e-07 56.6 44 54.5
Dinv01540 Davidia involucrata HOM05D000645 ORTHO05D000494 9.9e-07 56.2 58 46.6
Nitab4.5_0000109g0330 Nicotiana tabacum HOM05D000645 ORTHO05D000494 1.7e-06 55.5 61 45.9
Oeu009999.1 Olea europaea HOM05D000645 ORTHO05D000494 1.7e-06 55.5 44 52.3
C09p44500 Brassica napus HOM05D000645 ORTHO05D000494 2.2e-06 55.1 54 46.3
Duzib138G0076 Durio zibethinus HOM05D000645 ORTHO05D000494 2.2e-06 55.1 58 48.3
Oeu041382.1 Olea europaea HOM05D000645 ORTHO05D000494 2.2e-06 55.1 44 52.3
Actinidia27298 Actinidia chinensis HOM05D000645 ORTHO05D000494 2.9e-06 54.7 54 46.3
Gorai.007G110600 Gossypium raimondii HOM05D000645 ORTHO05D000494 2.9e-06 54.7 44 50.0
CARHR267420 Cardamine hirsuta HOM05D000645 ORTHO05D000494 3.7e-06 54.3 51 49.0
Potri.002G174100 Populus trichocarpa HOM05D000645 ORTHO05D000494 3.7e-06 54.3 68 42.6
Sed0024995 Sechium edule HOM05D000645 ORTHO05D000494 3.7e-06 54.3 59 47.5
A10p11520 Brassica napus HOM05D000645 ORTHO05D000494 4.9e-06 53.9 45 51.1
BraA10t43246Z Brassica rapa HOM05D000645 ORTHO05D000494 4.9e-06 53.9 45 51.1
Nitab4.5_0002728g0030 Nicotiana tabacum HOM05D000645 ORTHO05D000494 4.9e-06 53.9 61 45.9
CSS0003166 Camellia sinensis var. sinensis HOM05D000645 ORTHO05D000494 6.4e-06 53.5 44 52.3
CSS0036699 Camellia sinensis var. sinensis HOM05D000645 ORTHO05D000494 6.4e-06 53.5 44 52.3
BcaC01g06293 Brassica carinata HOM05D000645 ORTHO05D000494 8.4e-06 53.1 55 45.5
C03p17270 Brassica napus HOM05D000989 ORTHO05D001287 8.4e-06 53.1 55 45.5
BolC3t14139H Brassica oleracea HOM05D000645 ORTHO05D000494 8.4e-06 53.1 55 45.5
ClCG01G001640 Citrullus lanatus HOM05D000645 ORTHO05D000494 8.4e-06 53.1 59 49.2
Gohir.D11G103300 Gossypium hirsutum HOM05D000645 ORTHO05D000494 8.4e-06 53.1 44 47.7
Nitab4.5_0000673g0060 Nicotiana tabacum HOM05D000645 ORTHO05D000494 8.4e-06 53.1 59 49.2
QL02p028509 Quercus lobata HOM05D000645 ORTHO05D000494 8.4e-06 53.1 51 49.0


User provided reference genes

Program Settings