Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0521G001 Amborella trichopoda HOM05D063706 ORTHO05D011366 3.9e-99 364.8 179 100.0
ATR1136G141 Amborella trichopoda HOM05D011842 ORTHO05D011366 8.5e-14 81.3 158 31.0
ATR0559G353 Amborella trichopoda HOM05D063706 ORTHO05D011366 2.3e-11 73.2 89 47.2
ATR1136G003 Amborella trichopoda HOM05D011842 ORTHO05D011366 2.3e-11 73.2 166 30.1
ATR0736G153 Amborella trichopoda HOM05D012411 ORTHO05D011070 6.8e-11 71.6 160 33.8
ATR0736G009 Amborella trichopoda HOM05D013040 ORTHO05D011366 8.8e-11 71.2 163 27.6
ATR0736G026 Amborella trichopoda HOM05D012411 ORTHO05D011070 3.4e-10 69.3 142 35.2
ATR0746G001 Amborella trichopoda HOM05D013040 ORTHO05D011366 1.3e-09 67.4 134 31.3
ATR1136G071 Amborella trichopoda HOM05D011842 ORTHO05D011366 2.2e-09 66.6 157 31.2
QL04p068155 Quercus lobata HOM05D000007 ORTHO05D000017 2.2e-09 66.6 164 29.9
Migut.H02131 Erythranthe guttata HOM05D000007 ORTHO05D000039 6.3e-09 65.1 163 32.5
ATR1096G135 Amborella trichopoda HOM05D012411 ORTHO05D011070 1.1e-08 64.3 167 30.5
Migut.G00050 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.4e-08 63.9 165 33.9
ATR0681G217 Amborella trichopoda HOM05D015801 ORTHO05D011070 1.8e-08 63.5 155 28.4
ATR1136G082 Amborella trichopoda HOM05D011842 ORTHO05D011366 3.1e-08 62.8 156 30.8
QL04p068200 Quercus lobata HOM05D000007 ORTHO05D000017 3.1e-08 62.8 162 32.1
QL04p019471 Quercus lobata HOM05D000007 ORTHO05D000039 4.1e-08 62.4 158 32.3
CsaV3_3G041350 Cucumis sativus L. HOM05D000007 ORTHO05D000039 7.0e-08 61.6 166 31.9
Haze_12718 Corylus avellana HOM05D000007 ORTHO05D000039 2.0e-07 60.1 164 28.0
Lj1P667T11 Lonicera japonica HOM05D000007 ORTHO05D000039 2.7e-07 59.7 164 30.5
Lj1P669T8 Lonicera japonica HOM05D000007 ORTHO05D000039 2.7e-07 59.7 164 30.5
Lj1P672T29 Lonicera japonica HOM05D000007 ORTHO05D000039 2.7e-07 59.7 164 30.5
ATR0730G093 Amborella trichopoda HOM05D035754 ORTHO05D031090 3.5e-07 59.3 184 31.0
ATR1096G071 Amborella trichopoda HOM05D012411 ORTHO05D011070 3.5e-07 59.3 157 26.1
Haze_12717 Corylus avellana HOM05D000007 ORTHO05D000039 4.5e-07 58.9 177 27.7
CsaV3_3G041370 Cucumis sativus L. HOM05D000007 ORTHO05D000039 4.5e-07 58.9 166 32.5
Lsat_1_v5_gn_2_11361 Lactuca sativa HOM05D000007 ORTHO05D000039 5.9e-07 58.5 161 31.1
RcHm_v2.0_Chr2g0143631 Rosa chinensis HOM05D000007 ORTHO05D000039 5.9e-07 58.5 163 28.2
ATR0794G151 Amborella trichopoda HOM05D013040 ORTHO05D011366 7.7e-07 58.2 161 29.8
FAN09G3540 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.0e-06 57.8 159 28.3
CSS0001643 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.3e-06 57.4 169 30.8
Medtr1g050542 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-06 57.4 138 31.9
AUR62033032 Chenopodium quinoa HOM05D002420 ORTHO05D002422 2.3e-06 56.6 146 30.8
Cc05_g08680 Coffea canephora HOM05D000007 ORTHO05D000039 2.3e-06 56.6 170 31.8
CsaV3_3G041340 Cucumis sativus L. HOM05D000007 ORTHO05D000039 2.3e-06 56.6 160 31.2
AUR62040762 Chenopodium quinoa HOM05D002420 ORTHO05D002422 2.9e-06 56.2 167 28.1
HanXRQChr15g0467301 Helianthus annuus HOM05D000007 ORTHO05D000039 3.8e-06 55.8 154 29.9
QL09p021424 Quercus lobata HOM05D000007 ORTHO05D000039 5.0e-06 55.5 164 31.1
PSO585G0015 Papaver somniferum HOM05D000007 ORTHO05D000039 6.6e-06 55.1 131 31.3
PSO675G8790 Papaver somniferum HOM05D000007 ORTHO05D000017 6.6e-06 55.1 168 29.2
QL04p037119 Quercus lobata HOM05D000007 ORTHO05D000039 6.6e-06 55.1 174 28.7
ATR1096G136 Amborella trichopoda HOM05D012411 ORTHO05D011070 8.6e-06 54.7 122 28.7
PGSC0003DMG400009446 Solanum tuberosum HOM05D000007 ORTHO05D000039 8.6e-06 54.7 167 26.9


User provided reference genes

Program Settings