Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0516G001 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.9e-63 245.7 127 100.0
ATR0564G442 Amborella trichopoda HOM05D000161 ORTHO05D000111 5.2e-58 227.6 127 95.3
ATR0564G074 Amborella trichopoda HOM05D000161 ORTHO05D000111 9.6e-36 153.7 129 65.1
ATR0753G026 Amborella trichopoda HOM05D000161 ORTHO05D000111 2.1e-35 152.5 129 65.9
ATR0100G047 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.0e-16 90.5 131 44.3
ATR0743G100 Amborella trichopoda HOM05D000161 ORTHO05D000111 5.0e-16 88.2 131 44.3
ATR0564G072 Amborella trichopoda HOM05D000161 ORTHO05D000111 6.5e-16 87.8 129 42.6
ATR0564G428 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.1e-15 87.0 131 43.5
ATR0564G470 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.2e-14 83.6 129 41.1
ATR0564G489 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.2e-14 83.6 127 43.3
ATR0564G494 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.2e-14 83.6 125 43.2
ATR0564G510 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.2e-14 83.6 129 40.3
ATR0420G001 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.6e-14 83.2 129 40.3
ATR0743G069 Amborella trichopoda HOM05D000161 ORTHO05D000111 4.3e-12 75.1 129 38.0
ATR0564G526 Amborella trichopoda HOM05D000161 ORTHO05D000111 6.3e-11 71.2 89 41.6
ATR0100G026 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.8e-10 69.7 89 41.6
ATR0564G512 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.8e-10 69.7 89 41.6
ATR0564G139 Amborella trichopoda HOM05D000161 ORTHO05D000111 5.9e-09 64.7 66 45.5
Hund09483 Selenicereus undatus HOM05D000161 ORTHO05D000111 5.9e-09 64.7 103 39.8
ATR0564G093 Amborella trichopoda HOM05D000161 ORTHO05D000111 3.8e-08 62.0 66 43.9
ATR0564G406 Amborella trichopoda HOM05D000161 ORTHO05D000111 3.8e-08 62.0 66 43.9
ATR0564G501 Amborella trichopoda HOM05D000161 ORTHO05D000111 3.8e-08 62.0 66 43.9
ATR0780G001 Amborella trichopoda HOM05D000161 ORTHO05D000111 2.5e-07 59.3 66 40.9
TAR625G1465 Trochodendron aralioides HOM05D000161 ORTHO05D000111 5.5e-07 58.2 71 40.8
Nitab4.5_0001307g0150 Nicotiana tabacum HOM05D000161 ORTHO05D000111 7.2e-07 57.8 86 40.7
PSO339G1396 Papaver somniferum HOM05D000161 ORTHO05D000111 7.2e-07 57.8 98 39.8
ATR0564G303 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.2e-06 57.0 65 47.7
FAN13G1763 Fragaria x ananassa HOM05D000161 ORTHO05D000111 1.2e-06 57.0 80 36.2
Solyc04g072520.3 Solanum lycopersicum HOM05D000161 ORTHO05D000111 1.2e-06 57.0 75 38.7
ATR0782G085 Amborella trichopoda HOM05D000161 ORTHO05D000111 1.6e-06 56.6 70 41.4
Lj3P355T7 Lonicera japonica HOM05D000161 ORTHO05D000111 1.6e-06 56.6 128 31.2
MD15G1366400 Malus domestica HOM05D000161 ORTHO05D000111 1.6e-06 56.6 111 36.0
GSVIVG01009012001 Vitis vinifera HOM05D000161 ORTHO05D000111 1.6e-06 56.6 121 37.2
Aqoxy2G00954 Aquilegia oxysepala HOM05D000161 ORTHO05D000111 2.1e-06 56.2 89 40.4
FvH4_5g37740 Fragaria vesca HOM05D000161 ORTHO05D000111 2.1e-06 56.2 89 34.8
FAN18G4411 Fragaria x ananassa HOM05D000161 ORTHO05D000111 2.1e-06 56.2 89 34.8
PSO339G0779 Papaver somniferum HOM05D000161 ORTHO05D000111 2.1e-06 56.2 121 33.9
Sc22g0004030 Simmondsia chinensis HOM05D000161 ORTHO05D000111 3.6e-06 55.5 85 36.5
Aqoxy2G00951 Aquilegia oxysepala HOM05D000161 ORTHO05D000111 4.7e-06 55.1 105 41.0
CAN.G655.1 Capsicum annuum HOM05D000161 ORTHO05D000111 4.7e-06 55.1 76 40.8
Lj3P354T29 Lonicera japonica HOM05D000161 ORTHO05D000111 4.7e-06 55.1 128 31.2
Nn3g20678 Nelumbo nucifera HOM05D000161 ORTHO05D000111 4.7e-06 55.1 83 42.2
Peaxi162Scf00405g00171 Petunia axillaris HOM05D000161 ORTHO05D000111 4.7e-06 55.1 91 35.2
CAN.G1791.3 Capsicum annuum HOM05D000161 ORTHO05D000111 6.1e-06 54.7 79 35.4
Medtr2g437130 Medicago truncatula HOM05D000161 ORTHO05D000111 6.1e-06 54.7 79 40.5
Rhsim10G0144200 Rhododendron simsii HOM05D000161 ORTHO05D000111 6.1e-06 54.7 106 34.9
ATR0564G544 Amborella trichopoda HOM05D000161 ORTHO05D000111 7.9e-06 54.3 71 42.3
Lj3P355T16 Lonicera japonica HOM05D000161 ORTHO05D000111 7.9e-06 54.3 128 32.0
GSVIVG01028382001 Vitis vinifera HOM05D000161 ORTHO05D000111 7.9e-06 54.3 79 43.0


User provided reference genes

Program Settings