Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0499G006 Amborella trichopoda HOM05D004538 ORTHO05D066479 3.3e-65 251.5 122 100.0
ATR0751G112 Amborella trichopoda HOM05D004538 ORTHO05D006068 2.4e-28 129.0 117 63.2
MBI14_g30901_MAGBIO Magnolia biondii HOM05D004538 ORTHO05D006068 1.6e-27 126.3 117 61.5
Dinv31347 Davidia involucrata HOM05D004538 ORTHO05D006068 4.3e-25 118.2 117 57.3
SGA_v2.0_scaffold62G21339 Striga asiatica HOM05D004538 ORTHO05D006068 4.3e-25 118.2 117 58.1
Hund19415 Selenicereus undatus HOM05D004538 ORTHO05D006068 5.6e-25 117.9 123 56.9
Hund25422 Selenicereus undatus HOM05D004538 ORTHO05D006068 5.6e-25 117.9 117 57.3
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 5.6e-25 117.9 117 59.0
RcHm_v2.0_Chr6g0267391 Rosa chinensis HOM05D004538 ORTHO05D006068 7.3e-25 117.5 117 59.0
Ah.12g065010 Amaranthus hybridus HOM05D004538 ORTHO05D006068 9.6e-25 117.1 123 56.9
CDE03G0061 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 9.6e-25 117.1 118 55.1
FvH4_2g10180 Fragaria vesca HOM05D004538 ORTHO05D006068 9.6e-25 117.1 117 59.0
CiPaw.15G107100 Carya illinoinensis HOM05D004538 ORTHO05D006068 1.3e-24 116.7 123 54.5
Cc02_g29800 Coffea canephora HOM05D004538 ORTHO05D006068 1.3e-24 116.7 123 56.1
Actinidia00835 Actinidia chinensis HOM05D004538 ORTHO05D006068 1.6e-24 116.3 123 56.1
Cc02_g09720 Coffea canephora HOM05D004538 ORTHO05D006068 1.6e-24 116.3 123 56.1
Os08g0496000 Oryza sativa ssp. japonica HOM05D004538 ORTHO05D006068 1.6e-24 116.3 123 55.3
CSS0012792 Camellia sinensis var. sinensis HOM05D004538 ORTHO05D006068 2.1e-24 115.9 123 56.1
FAN24G0261 Fragaria x ananassa HOM05D004538 ORTHO05D006068 2.1e-24 115.9 117 58.1
Glyma.02G303400 Glycine max HOM05D004538 ORTHO05D006068 2.1e-24 115.9 117 57.3
SalBow6G4226 Salvia bowleyana HOM05D004538 ORTHO05D006068 2.1e-24 115.9 118 57.6
CANSAT11G1513 Cannabis sativa HOM05D004538 ORTHO05D006068 2.8e-24 115.5 117 56.4
Prupe.4G230100 Prunus persica HOM05D004538 ORTHO05D006068 2.8e-24 115.5 117 58.1
unitig_899.g14715 Utricularia gibba HOM05D004538 ORTHO05D006068 2.8e-24 115.5 117 56.4
Lj8A182T63 Lonicera japonica HOM05D004538 ORTHO05D006068 3.6e-24 115.2 117 56.4
Aqoxy7G01640 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 4.8e-24 114.8 117 57.3
DCAR_013768 Daucus carota HOM05D004538 ORTHO05D006068 4.8e-24 114.8 123 54.5
Gohir.A13G129700 Gossypium hirsutum HOM05D004538 ORTHO05D006068 4.8e-24 114.8 117 55.6
Gohir.D13G132900 Gossypium hirsutum HOM05D004538 ORTHO05D006068 4.8e-24 114.8 117 55.6
Gorai.013G149100 Gossypium raimondii HOM05D004538 ORTHO05D006068 4.8e-24 114.8 117 55.6
LjContig00081g0007081 Lotus japonicus HOM05D004538 ORTHO05D006068 4.8e-24 114.8 123 55.3
Phvul.008G282700 Phaseolus vulgaris HOM05D004538 ORTHO05D006068 4.8e-24 114.8 117 56.4
Thecc.07G004000 Theobroma cacao HOM05D004538 ORTHO05D006068 4.8e-24 114.8 117 55.6
GSVIVG01014777001 Vitis vinifera HOM05D004538 ORTHO05D006068 4.8e-24 114.8 123 55.3
Ciclev10008262m.g Citrus clementina HOM05D004538 ORTHO05D006068 6.2e-24 114.4 123 54.5
CsaV3_4G008160 Cucumis sativus L. HOM05D004538 ORTHO05D006068 6.2e-24 114.4 117 56.4
MD07G1040600 Malus domestica HOM05D004538 ORTHO05D006068 6.2e-24 114.4 123 55.3
Prupe.8G086500 Prunus persica HOM05D004538 ORTHO05D006068 6.2e-24 114.4 117 57.3
QL09p046970 Quercus lobata HOM05D004538 ORTHO05D006068 6.2e-24 114.4 123 56.1
Aa31LG3G12000 Aethionema arabicum HOM05D004538 ORTHO05D006068 8.1e-24 114.0 117 54.7
CDE06G0653 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 8.1e-24 114.0 118 55.1
Haze_03267 Corylus avellana HOM05D004538 ORTHO05D006068 8.1e-24 114.0 123 55.3
FvH4_3g41910 Fragaria vesca HOM05D004538 ORTHO05D006068 8.1e-24 114.0 117 57.3
VMungo0647G1241 Vigna mungo HOM05D004538 ORTHO05D006068 8.1e-24 114.0 117 55.6
Zm00001eb033900 Zea mays HOM05D004538 ORTHO05D006068 8.1e-24 114.0 123 53.7
AUR62032611 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.1e-23 113.6 124 55.6
FAN11G3993 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.1e-23 113.6 117 57.3
MD02G1271400 Malus domestica HOM05D004538 ORTHO05D006068 1.1e-23 113.6 117 57.3
RcHm_v2.0_Chr5g0075121 Rosa chinensis HOM05D004538 ORTHO05D006068 1.1e-23 113.6 117 56.4
THA.LOC104811692 Tarenaya hassleriana HOM05D004538 ORTHO05D006068 1.1e-23 113.6 123 55.3
FAN25G0511 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.4e-23 113.2 117 56.4
PSO063G5767 Papaver somniferum HOM05D004538 ORTHO05D006068 1.4e-23 113.2 122 55.7
Sc07g0002240 Simmondsia chinensis HOM05D004538 ORTHO05D006068 1.4e-23 113.2 118 55.1
AUR62001067 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.8e-23 112.8 123 55.3
FAN21G0976 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.8e-23 112.8 117 56.4
Peaxi162Scf00173g00324 Petunia axillaris HOM05D004538 ORTHO05D006068 1.8e-23 112.8 117 57.3
Sed0002758 Sechium edule HOM05D004538 ORTHO05D006068 1.8e-23 112.8 117 55.6
vmacro09607 Vaccinium macrocarpon HOM05D004538 ORTHO05D006068 1.8e-23 112.8 117 54.7
Hma1.2p1_0321F.1_g124200 Hydrangea macrophylla HOM05D004538 ORTHO05D006068 2.4e-23 112.5 122 54.9
Lalb_Chr04g0247681 Lupinus albus HOM05D004538 ORTHO05D006068 2.4e-23 112.5 117 55.6
Oeu036424.1 Olea europaea HOM05D004538 ORTHO05D006068 2.4e-23 112.5 117 56.4
EL10Ac2g02751 Beta vulgaris HOM05D004538 ORTHO05D006068 3.1e-23 112.1 123 54.5
Ca_06424_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 3.1e-23 112.1 117 54.7
COL.COLO4_07768 Corchorus olitorius HOM05D004538 ORTHO05D006068 3.1e-23 112.1 117 54.7
Nn1g08442 Nelumbo nucifera HOM05D004538 ORTHO05D006068 3.1e-23 112.1 117 54.7
Nitab4.5_0001437g0060 Nicotiana tabacum HOM05D004538 ORTHO05D006068 3.1e-23 112.1 117 56.4
PGR083G1782 Punica granatum HOM05D004538 ORTHO05D006068 3.1e-23 112.1 123 54.5
Lj5g0024294 Lotus japonicus HOM05D004538 ORTHO05D006068 4.0e-23 111.7 123 54.5
Eucgr.F02006 Eucalyptus grandis HOM05D004538 ORTHO05D006068 5.3e-23 111.3 117 55.6
HPP92_015457 Vanilla planifolia HOM05D004538 ORTHO05D006068 5.3e-23 111.3 122 52.5
CAN.G645.5 Capsicum annuum HOM05D004538 ORTHO05D006068 6.9e-23 110.9 117 55.6
Cpa.g.sc97.88 Carica papaya HOM05D004538 ORTHO05D006068 6.9e-23 110.9 117 54.7
Duzib268G1486 Durio zibethinus HOM05D004538 ORTHO05D006068 6.9e-23 110.9 117 53.8
PSO541G6331 Papaver somniferum HOM05D004538 ORTHO05D006068 6.9e-23 110.9 117 56.4
Psat2g005560 Pisum sativum HOM05D004538 ORTHO05D006068 6.9e-23 110.9 117 54.7
Solyc11g007000.2 Solanum lycopersicum HOM05D004538 ORTHO05D006068 6.9e-23 110.9 117 55.6
Sopen11g002920 Solanum pennellii HOM05D004538 ORTHO05D006068 6.9e-23 110.9 117 55.6
PGSC0003DMG400023975 Solanum tuberosum HOM05D004538 ORTHO05D006068 6.9e-23 110.9 117 55.6
TAR626G1654 Trochodendron aralioides HOM05D004538 ORTHO05D006068 6.9e-23 110.9 117 55.6
arahy.Tifrunner.gnm1.ann1.0Z7D2W Arachis hypogaea HOM05D004538 ORTHO05D006068 9.0e-23 110.5 117 54.7
Lj1C898T12 Lonicera japonica HOM05D004538 ORTHO05D006068 9.0e-23 110.5 117 53.0
Nitab4.5_0004391g0070 Nicotiana tabacum HOM05D004538 ORTHO05D006068 9.0e-23 110.5 118 54.2
AL2G22990 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 1.2e-22 110.2 117 53.8
AL2G24490 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 1.2e-22 110.2 117 53.8
Glyma.14G010400 Glycine max HOM05D004538 ORTHO05D006068 1.2e-22 110.2 116 55.2
Medtr5g096830 Medicago truncatula HOM05D004538 ORTHO05D006068 1.2e-22 110.2 117 53.8
PSO675G3744 Papaver somniferum HOM05D004538 ORTHO05D006068 1.2e-22 110.2 117 55.6
Potri.011G166800 Populus trichocarpa HOM05D004538 ORTHO05D006068 1.2e-22 110.2 117 53.0
Nitab4.5_0005622g0040 Nicotiana tabacum HOM05D004538 ORTHO05D006068 2.0e-22 109.4 117 55.6
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 2.6e-22 109.0 117 53.0
Migut.F00884 Erythranthe guttata HOM05D004538 ORTHO05D006068 2.6e-22 109.0 116 54.3
Thhalv10013497m.g Eutrema salsugineum HOM05D004538 ORTHO05D006068 2.6e-22 109.0 117 53.0
Sp6g17940 Schrenkiella parvula HOM05D004538 ORTHO05D006068 2.6e-22 109.0 117 53.0
AL8G31670 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 3.4e-22 108.6 117 53.0
AL8G31690 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 3.4e-22 108.6 117 53.0
AT5G56090 Arabidopsis thaliana HOM05D004538 ORTHO05D006068 3.4e-22 108.6 117 53.0
Carub.0008s1641 Capsella rubella HOM05D004538 ORTHO05D006068 3.4e-22 108.6 117 53.0
CARHR269470 Cardamine hirsuta HOM05D004538 ORTHO05D006068 3.4e-22 108.6 117 53.0
arahy.Tifrunner.gnm1.ann1.01YFCZ Arachis hypogaea HOM05D004538 ORTHO05D006068 4.4e-22 108.2 117 53.0
Medtr3g095790 Medicago truncatula HOM05D004538 ORTHO05D006068 4.4e-22 108.2 117 53.0
BcaB08g35975 Brassica carinata HOM05D004538 ORTHO05D006068 5.8e-22 107.8 117 53.0
BcaC04g20148 Brassica carinata HOM05D004538 ORTHO05D006068 5.8e-22 107.8 117 53.0
BcaC04g20151 Brassica carinata HOM05D004538 ORTHO05D006068 5.8e-22 107.8 117 53.0
BcaC04g20158 Brassica carinata HOM05D004538 ORTHO05D006068 5.8e-22 107.8 117 53.0
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 5.8e-22 107.8 117 53.0
BolC9t57574H Brassica oleracea HOM05D004538 ORTHO05D006068 5.8e-22 107.8 117 53.0
BraA10t43427Z Brassica rapa HOM05D004538 ORTHO05D006068 5.8e-22 107.8 117 53.0
Mapoly0020s0071 Marchantia polymorpha HOM05D004538 ORTHO05D006068 5.8e-22 107.8 118 52.5
Sabra11G0139500 Salix brachista HOM05D004538 ORTHO05D006068 5.8e-22 107.8 117 52.1
C09p47240 Brassica napus HOM05D004538 ORTHO05D006068 7.6e-22 107.5 117 53.0
MELO3C016120.2 Cucumis melo HOM05D004538 ORTHO05D006068 7.6e-22 107.5 128 52.3
TWI39G0910 Tripterygium wilfordii HOM05D004538 ORTHO05D006068 9.9e-22 107.1 117 52.1
ClCG07G010160 Citrullus lanatus HOM05D004538 ORTHO05D006068 1.3e-21 106.7 128 52.3
ECA236G0032 Erigeron canadensis HOM05D004538 ORTHO05D006068 1.3e-21 106.7 117 52.1
TPR.G1264 Trifolium pratense HOM05D004538 ORTHO05D006068 1.3e-21 106.7 117 52.1
HanXRQChr04g0114571 Helianthus annuus HOM05D004538 ORTHO05D006068 2.2e-21 105.9 117 52.1
Lsat_1_v5_gn_7_116401 Lactuca sativa HOM05D004538 ORTHO05D006068 2.2e-21 105.9 123 51.2
Duzib213G1090 Durio zibethinus HOM05D004538 ORTHO05D006068 3.8e-21 105.1 117 51.3
Potri.001G469701 Populus trichocarpa HOM05D004538 ORTHO05D006068 6.4e-21 104.4 117 51.3
HanXRQChr11g0334561 Helianthus annuus HOM05D004538 ORTHO05D006068 8.4e-21 104.0 117 50.4
Cc02_g29840 Coffea canephora HOM05D004538 ORTHO05D006068 2.4e-20 102.4 117 52.1
Pp3c7_5710 Physcomitrium patens HOM05D004538 ORTHO05D006068 9.3e-20 100.5 117 47.9
AagrBONN_evm.TU.Sc2ySwM_368.2501 Anthoceros agrestis HOM05D004538 ORTHO05D006068 3.5e-19 98.6 117 47.9
SMO353G0004 Selaginella moellendorffii HOM05D004538 ORTHO05D006068 1.0e-18 97.1 119 49.6
CBR_g24146 Chara braunii HOM05D004538 ORTHO05D006068 6.6e-18 94.4 118 46.6
Aqoxy289s001 Aquilegia oxysepala HOM05D004538 ORTHO05D008153 8.7e-18 94.0 118 49.2
Atru.chr2.2684 Acer truncatum HOM05D004538 ORTHO05D006068 5.6e-17 91.3 126 46.8
A10p13310 Brassica napus HOM05D004538 ORTHO05D006068 1.6e-16 89.7 107 48.6
PRCOL_00000259 Prasinoderma coloniale HOM05D004538 ORTHO05D006068 2.1e-16 89.4 117 46.2
CDE02G3208 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 1.8e-15 86.3 117 45.3
AUR62031724 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.8e-15 86.3 102 52.9
SalBow6G3380 Salvia bowleyana HOM05D004538 ORTHO05D006068 4.5e-14 81.6 112 44.6
BolC9t57580H Brassica oleracea HOM05D004538 ORTHO05D006068 9.9e-14 80.5 109 45.9
Aa31LG3G11950 Aethionema arabicum HOM05D004538 ORTHO05D006068 3.8e-13 78.6 117 42.7
Cre02.g082700 Chlamydomonas reinhardtii HOM05D004538 ORTHO05D006068 1.9e-12 76.3 120 42.5
MSTRG.9067 Avicennia marina HOM05D004538 ORTHO05D006068 1.2e-06 57.0 34 82.4
Manes.01G005033 Manihot esculenta HOM05D004538 ORTHO05D006068 1.5e-06 56.6 95 40.0
SHI46402 Sapria himalayana HOM05D004538 ORTHO05D006068 2.0e-06 56.2 35 77.1
SHI05855 Sapria himalayana HOM05D004538 ORTHO05D006068 7.6e-06 54.3 34 76.5


User provided reference genes

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