Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 1.4e-99 366.3 186 100.0
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 7.2e-56 221.1 186 59.7
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 1.2e-55 220.3 186 59.1
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 2.7e-55 219.2 186 58.6
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 2.7e-55 219.2 185 60.0
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 3.6e-55 218.8 187 59.4
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 4.7e-55 218.4 180 61.7
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 6.1e-55 218.0 186 58.1
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.0e-54 217.2 187 59.4
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.4e-54 216.9 183 58.5
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 1.8e-54 216.5 186 58.6
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 2.3e-54 216.1 187 60.4
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 5.1e-54 214.9 186 58.1
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 6.7e-54 214.5 182 58.2
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.6e-53 212.6 185 57.8
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 3.3e-53 212.2 186 57.0
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 4.4e-53 211.8 186 58.1
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 4.4e-53 211.8 183 60.1
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 7.4e-53 211.1 186 57.0
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 2.8e-52 209.1 186 56.5
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 2.8e-52 209.1 186 57.5
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 3.7e-52 208.8 186 57.0
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 4.8e-52 208.4 186 57.5
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 4.8e-52 208.4 183 57.9
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 6.3e-52 208.0 176 59.1
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 8.2e-52 207.6 187 58.8
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 8.2e-52 207.6 185 56.8
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 1.1e-51 207.2 186 54.8
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 1.4e-51 206.8 180 59.4
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 1.8e-51 206.5 185 56.2
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 2.4e-51 206.1 160 65.0
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 2.4e-51 206.1 186 56.5
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 3.1e-51 205.7 186 56.5
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 4.1e-51 205.3 179 57.5
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 4.1e-51 205.3 175 60.0
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 5.3e-51 204.9 186 56.5
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 7.0e-51 204.5 179 57.0
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 1.5e-50 203.4 186 56.5
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 2.0e-50 203.0 185 55.7
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 4.5e-50 201.8 185 55.7
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 5.9e-50 201.4 175 57.1
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 7.7e-50 201.1 184 56.0
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 7.7e-50 201.1 175 57.1
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 1.0e-49 200.7 185 55.7
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 1.3e-49 200.3 175 56.6
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 1.3e-49 200.3 175 56.6
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 5.0e-49 198.4 175 58.3
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 8.5e-49 197.6 183 55.2
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 1.1e-48 197.2 185 55.1
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 1.1e-48 197.2 185 55.1
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 1.1e-48 197.2 185 55.1
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 1.1e-48 197.2 185 55.1
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 1.1e-48 197.2 186 55.4
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 1.4e-48 196.8 183 55.2
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 1.9e-48 196.4 186 54.3
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 1.9e-48 196.4 180 56.7
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 5.5e-48 194.9 177 57.1
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 1.2e-47 193.7 179 53.6
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 1.6e-47 193.4 187 54.5
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 1.6e-47 193.4 190 55.3
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 1.6e-47 193.4 186 54.8
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 4.7e-47 191.8 183 53.6
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 2.3e-46 189.5 176 54.0
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 2.3e-46 189.5 179 55.3
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 3.0e-46 189.1 184 53.8
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 3.9e-46 188.7 186 51.6
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 5.2e-46 188.3 179 54.2
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 6.7e-46 188.0 182 52.7
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.1e-45 187.2 180 54.4
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.1e-45 187.2 177 55.4
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 1.1e-45 187.2 188 53.7
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 1.5e-45 186.8 185 52.4
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 2.0e-45 186.4 186 50.0
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 2.0e-45 186.4 184 53.8
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 2.6e-45 186.0 184 54.3
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 3.3e-45 185.7 182 53.3
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 4.4e-45 185.3 182 52.7
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 4.4e-45 185.3 152 60.5
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 4.4e-45 185.3 180 55.0
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 5.7e-45 184.9 185 52.4
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 9.7e-45 184.1 183 53.6
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 9.7e-45 184.1 176 54.5
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.3e-44 183.7 184 53.8
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 2.8e-44 182.6 179 54.2
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.8e-44 182.6 179 53.1
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 2.8e-44 182.6 187 52.9
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 6.3e-44 181.4 183 52.5
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 6.3e-44 181.4 180 51.7
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 1.4e-43 180.3 182 52.2
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 1.4e-43 180.3 182 52.2
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 3.1e-43 179.1 181 53.6
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 3.1e-43 179.1 182 50.5
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 7.0e-43 177.9 184 52.2
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 5.9e-42 174.9 191 48.7
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 5.2e-38 161.8 182 48.9
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 1.3e-33 147.1 174 48.3
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 2.2e-33 146.4 174 47.7
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 2.5e-32 142.9 184 47.3
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 7.2e-32 141.4 186 45.2
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 2.4e-27 126.3 179 44.1
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.3e-20 104.0 242 33.1
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 7.8e-18 94.7 183 36.1
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 3.4e-13 79.3 123 39.0
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 5.6e-08 62.0 48 56.2
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 3.6e-07 59.3 48 56.2


User provided reference genes

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