Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 3.5e-49 198.0 100 100.0
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 8.1e-22 107.1 93 58.1
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 1.4e-21 106.3 92 55.4
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 2.4e-21 105.5 90 63.3
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 5.3e-21 104.4 93 59.1
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 6.9e-21 104.0 84 60.7
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 6.9e-21 104.0 96 57.3
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 2.0e-20 102.4 99 55.6
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 2.6e-20 102.1 96 56.2
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 3.4e-20 101.7 96 56.2
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 3.4e-20 101.7 89 58.4
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 9.9e-20 100.1 92 54.3
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 9.9e-20 100.1 93 54.8
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.3e-19 99.8 93 59.1
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 1.7e-19 99.4 89 55.1
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 1.7e-19 99.4 96 55.2
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 1.7e-19 99.4 96 55.2
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 1.7e-19 99.4 89 58.4
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 2.2e-19 99.0 93 57.0
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 2.2e-19 99.0 89 58.4
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 2.9e-19 98.6 93 55.9
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 2.9e-19 98.6 91 58.2
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.9e-19 98.6 91 58.2
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 3.8e-19 98.2 91 58.2
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 4.9e-19 97.8 89 53.9
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 6.4e-19 97.4 96 54.2
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 8.4e-19 97.1 89 55.1
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 8.4e-19 97.1 89 55.1
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.1e-18 96.7 91 57.1
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 1.1e-18 96.7 89 57.3
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 1.1e-18 96.7 91 54.9
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 1.4e-18 96.3 92 53.3
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 1.4e-18 96.3 89 56.2
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 1.4e-18 96.3 89 57.3
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 1.9e-18 95.9 86 55.8
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.9e-18 95.9 90 58.9
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.9e-18 95.9 91 56.0
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 1.9e-18 95.9 91 58.2
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 2.4e-18 95.5 89 55.1
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 3.2e-18 95.1 86 55.8
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 3.2e-18 95.1 89 52.8
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 3.2e-18 95.1 89 52.8
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 3.2e-18 95.1 89 52.8
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 3.2e-18 95.1 89 53.9
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 4.2e-18 94.7 90 55.6
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 4.2e-18 94.7 89 55.1
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 5.4e-18 94.4 93 51.6
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 5.4e-18 94.4 86 55.8
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 7.1e-18 94.0 86 50.0
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 7.1e-18 94.0 92 53.3
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 7.1e-18 94.0 88 54.5
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 7.1e-18 94.0 88 54.5
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 9.3e-18 93.6 86 54.7
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 1.2e-17 93.2 93 51.6
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 1.2e-17 93.2 90 55.6
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.6e-17 92.8 86 54.7
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.6e-17 92.8 89 52.8
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 2.7e-17 92.0 89 53.9
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 3.5e-17 91.7 89 51.7
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 3.5e-17 91.7 74 59.5
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 3.5e-17 91.7 74 62.2
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 4.6e-17 91.3 91 53.8
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 7.9e-17 90.5 96 53.1
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 1.0e-16 90.1 90 51.1
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 2.3e-16 89.0 89 52.8
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 2.3e-16 89.0 84 53.6
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 3.0e-16 88.6 89 53.9
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 3.0e-16 88.6 74 58.1
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 3.0e-16 88.6 72 59.7
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 3.9e-16 88.2 88 46.6
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.9e-16 88.2 88 51.1
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 5.1e-16 87.8 92 48.9
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 5.1e-16 87.8 89 49.4
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 5.1e-16 87.8 72 58.3
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 8.7e-16 87.0 74 59.5
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 1.1e-15 86.7 72 56.9
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 3.3e-15 85.1 89 51.7
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 5.6e-15 84.3 94 48.9
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 2.8e-14 82.0 71 54.9
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 4.8e-14 81.3 83 55.4
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 6.2e-14 80.9 104 43.3
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 6.2e-14 80.9 91 47.3
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 6.9e-13 77.4 94 43.6
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 2.0e-12 75.9 67 58.2
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 1.3e-11 73.2 81 44.4
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 6.7e-08 60.8 52 51.9
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 4.3e-07 58.2 49 55.1
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 5.7e-07 57.8 44 61.4
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 9.6e-07 57.0 52 53.8


User provided reference genes

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