Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 0.0e+00 1586.2 794 100.0
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 6.5e-122 442.6 732 38.7
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 8.8e-103 379.0 747 34.5
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 4.1e-100 370.2 713 35.2
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 7.7e-91 339.3 769 32.5
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 2.9e-90 337.4 716 33.0
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 5.5e-89 333.2 701 32.4
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 3.4e-86 323.9 702 32.9
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 3.4e-86 323.9 676 32.2
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.4e-84 318.5 723 31.1
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 1.8e-84 318.2 679 31.5
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 2.0e-83 314.7 720 31.0
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 1.3e-82 312.0 699 33.5
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 3.8e-82 310.5 707 33.1
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.1e-81 308.9 693 30.9
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 1.9e-81 308.1 679 31.4
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 1.9e-81 308.1 738 31.4
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 9.5e-81 305.8 721 30.7
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 1.2e-80 305.4 702 31.1
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 8.0e-80 302.8 751 31.7
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 1.2e-78 298.9 763 31.1
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 3.4e-78 297.4 726 31.5
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 7.5e-78 296.2 747 30.9
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.7e-77 295.0 711 30.8
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 6.3e-77 293.1 681 31.4
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 6.3e-77 293.1 689 32.2
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 1.8e-76 291.6 643 33.3
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 1.2e-75 288.9 747 31.3
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 5.9e-75 286.6 694 30.3
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 7.8e-75 286.2 693 31.0
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 1.0e-74 285.8 736 31.5
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 5.0e-74 283.5 712 31.5
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 5.6e-73 280.0 704 30.5
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 1.6e-72 278.5 747 29.0
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 4.7e-72 276.9 730 30.3
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 8.0e-72 276.2 698 31.5
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 6.8e-71 273.1 721 30.1
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 8.9e-71 272.7 710 28.9
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 7.5e-70 269.6 740 32.6
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 1.3e-69 268.9 680 30.6
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 3.7e-69 267.3 795 30.7
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 8.3e-69 266.2 786 29.0
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 1.1e-68 265.8 631 30.4
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 1.1e-68 265.8 700 29.9
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.9e-68 265.0 702 30.2
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 3.2e-68 264.2 701 30.2
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 7.0e-68 263.1 701 30.1
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 4.6e-67 260.4 754 27.7
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.0e-66 259.2 699 29.5
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 1.9e-65 255.0 765 26.7
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 9.5e-65 252.7 682 29.9
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 5.2e-63 246.9 724 29.4
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 1.2e-62 245.7 676 29.4
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 9.8e-62 242.7 685 27.6
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 2.9e-61 241.1 645 28.4
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 3.7e-61 240.7 676 29.4
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 4.9e-61 240.4 754 29.8
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 1.9e-60 238.4 684 30.4
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.4e-60 238.0 606 30.5
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 4.1e-60 237.3 627 29.3
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 7.0e-60 236.5 677 28.8
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 2.7e-59 234.6 534 31.3
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 3.5e-59 234.2 529 29.9
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 1.3e-58 232.3 744 28.1
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 5.6e-57 226.9 524 30.7
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 5.6e-57 226.9 460 33.5
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 2.3e-55 221.5 637 31.2
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 2.3e-55 221.5 490 30.8
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 5.2e-55 220.3 753 28.0
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 5.2e-55 220.3 753 28.0
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 7.5e-54 216.5 717 26.9
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 2.9e-53 214.5 746 27.9
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 3.7e-53 214.2 526 30.8
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 6.4e-53 213.4 742 27.1
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 8.3e-53 213.0 753 28.2
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 1.4e-52 212.2 749 26.8
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 1.9e-52 211.8 691 26.9
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 4.1e-52 210.7 737 27.8
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 1.7e-50 205.3 677 27.5
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 1.7e-50 205.3 762 27.0
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 8.6e-50 203.0 569 28.8
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 1.9e-49 201.8 801 26.3
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 4.3e-49 200.7 773 27.0
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 9.5e-49 199.5 716 26.5
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 6.2e-48 196.8 504 30.6
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 4.0e-47 194.1 675 29.3
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 5.2e-47 193.7 501 29.1
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 1.2e-46 192.6 463 29.2
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 1.5e-46 192.2 502 29.3
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 2.6e-46 191.4 586 28.8
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 4.9e-45 187.2 762 26.0
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 4.2e-44 184.1 738 25.5
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 1.6e-43 182.2 746 26.4
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 3.5e-43 181.0 704 25.0
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 1.7e-42 178.7 692 26.7
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 8.7e-42 176.4 728 25.3
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 2.0e-38 165.2 743 25.8
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 2.7e-35 154.8 710 25.1
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 2.1e-32 145.2 593 23.6
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 3.5e-27 127.9 536 25.0
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 6.0e-27 127.1 432 28.5
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 1.5e-25 122.5 373 27.6
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 1.2e-22 112.8 284 33.1
SEGI_13134 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 1.1e-17 96.3 316 27.8
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 6.2e-16 90.5 187 34.8
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 6.9e-15 87.0 117 41.9
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 2.0e-14 85.5 132 36.4
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 2.5e-12 78.6 250 28.4
HPP92_000131 Vanilla planifolia HOM05D006728 ORTHO05D007911 1.5e-06 59.3 150 34.7
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 5.9e-06 57.4 52 48.1


User provided reference genes

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