Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0481G006 Amborella trichopoda HOM05D008224 ORTHO05D010083 3.5e-59 231.5 121 100.0
ATR0627G002 Amborella trichopoda HOM05D008224 ORTHO05D010083 1.6e-56 222.6 121 96.7
TAR625G0799 Trochodendron aralioides HOM05D008224 ORTHO05D010083 6.4e-13 77.8 90 50.0
TAR381G1028 Trochodendron aralioides HOM05D008224 ORTHO05D010083 1.4e-12 76.6 129 43.4
Potri.005G114500 Populus trichocarpa HOM05D008224 ORTHO05D010083 2.4e-12 75.9 129 37.2
Gohir.A10G098400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 2.1e-11 72.8 91 46.2
COL.COLO4_21914 Corchorus olitorius HOM05D008224 ORTHO05D010083 2.7e-11 72.4 104 43.3
Thecc.01G019300 Theobroma cacao HOM05D008224 ORTHO05D010083 6.0e-11 71.2 93 48.4
Gohir.D10G089800 Gossypium hirsutum HOM05D008224 ORTHO05D010083 7.8e-11 70.9 91 44.0
Gorai.011G098500 Gossypium raimondii HOM05D008224 ORTHO05D010083 7.8e-11 70.9 91 44.0
Nn5g30159 Nelumbo nucifera HOM05D008224 ORTHO05D010083 7.8e-11 70.9 91 42.9
QL06p032684 Quercus lobata HOM05D008224 ORTHO05D010083 1.0e-10 70.5 101 44.6
QL12p007153 Quercus lobata HOM05D008224 ORTHO05D010083 1.0e-10 70.5 101 44.6
CiPaw.08G131800 Carya illinoinensis HOM05D008224 ORTHO05D010083 1.3e-10 70.1 91 48.4
Sabra05G0093700 Salix brachista HOM05D008224 ORTHO05D010083 1.3e-10 70.1 104 40.4
Peaxi162Scf00083g00052 Petunia axillaris HOM05D008224 ORTHO05D010083 1.7e-10 69.7 120 41.7
Lj4P218T44 Lonicera japonica HOM05D008224 ORTHO05D010083 2.3e-10 69.3 128 38.3
Glyma.01G166900 Glycine max HOM05D008224 ORTHO05D010083 3.0e-10 68.9 86 45.3
Cc07_g10680 Coffea canephora HOM05D008224 ORTHO05D010083 3.9e-10 68.6 88 45.5
Atru.chr4.381 Acer truncatum HOM05D008224 ORTHO05D010083 5.1e-10 68.2 119 37.8
Manes.02G104200 Manihot esculenta HOM05D008224 ORTHO05D010083 5.1e-10 68.2 86 45.3
Glyma.11G076300 Glycine max HOM05D008224 ORTHO05D010083 1.1e-09 67.0 86 45.3
Aqoxy5G01777 Aquilegia oxysepala HOM05D008224 ORTHO05D010083 1.5e-09 66.6 133 35.3
Haze_03767 Corylus avellana HOM05D008224 ORTHO05D010083 1.9e-09 66.2 89 44.9
Prupe.7G167900 Prunus persica HOM05D008224 ORTHO05D010083 1.9e-09 66.2 91 48.4
Nitab4.5_0006286g0060 Nicotiana tabacum HOM05D008224 ORTHO05D010083 2.5e-09 65.9 97 42.3
Oeu064592.1 Olea europaea HOM05D008224 ORTHO05D010083 2.5e-09 65.9 95 44.2
Phvul.002G109500 Phaseolus vulgaris HOM05D008224 ORTHO05D010083 2.5e-09 65.9 86 45.3
Gohir.D11G183450 Gossypium hirsutum HOM05D008224 ORTHO05D010083 5.6e-09 64.7 97 44.3
Nitab4.5_0003271g0030 Nicotiana tabacum HOM05D008224 ORTHO05D010083 5.6e-09 64.7 100 42.0
PGSC0003DMG400003638 Solanum tuberosum HOM05D008224 ORTHO05D010083 5.6e-09 64.7 115 37.4
Sopen02g028710 Solanum pennellii HOM05D008224 ORTHO05D010083 9.5e-09 63.9 115 40.0
Medtr5g021840 Medicago truncatula HOM05D008224 ORTHO05D010083 1.6e-08 63.2 111 40.5
Psat2g155040 Pisum sativum HOM05D008224 ORTHO05D010083 1.6e-08 63.2 113 39.8
Ciclev10027456m.g Citrus clementina HOM05D008224 ORTHO05D010083 2.1e-08 62.8 135 37.0
Hma1.2p1_0258F.1_g104170 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 2.1e-08 62.8 80 47.5
Gohir.A11G175668 Gossypium hirsutum HOM05D008224 ORTHO05D010083 2.8e-08 62.4 99 41.4
FvH4_1g11880 Fragaria vesca HOM05D008224 ORTHO05D010083 3.6e-08 62.0 87 43.7
FAN19G0355 Fragaria x ananassa HOM05D008224 ORTHO05D010083 3.6e-08 62.0 87 43.7
Gorai.007G195300 Gossypium raimondii HOM05D008224 ORTHO05D010083 3.6e-08 62.0 101 40.6
Solyc02g083930.1 Solanum lycopersicum HOM05D008224 ORTHO05D010083 3.6e-08 62.0 115 38.3
TPR.G18188 Trifolium pratense HOM05D008224 ORTHO05D010083 1.8e-07 59.7 82 45.1
Lalb_Chr09g0321801 Lupinus albus HOM05D008224 ORTHO05D010083 2.3e-07 59.3 106 38.7
Actinidia17446 Actinidia chinensis HOM05D008224 ORTHO05D010083 5.2e-07 58.2 90 41.1
Ca_25829_v3 Cicer arietinum L. HOM05D008224 ORTHO05D010083 5.2e-07 58.2 110 36.4
Hma1.2p1_0956F.1_g241380 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 8.9e-07 57.4 86 40.7
Hma1.2p1_2239F.1_g317816 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 8.9e-07 57.4 86 40.7
Carub.0008s2826 Capsella rubella HOM05D014245 ORTHO05D010083 3.4e-06 55.5 81 38.3
Gorai.003G009900 Gossypium raimondii HOM05D008224 ORTHO05D010083 3.4e-06 55.5 90 40.0
Nn1g05883 Nelumbo nucifera HOM05D008224 ORTHO05D010083 3.4e-06 55.5 73 49.3
CSS0002084 Camellia sinensis var. sinensis HOM05D008224 ORTHO05D010083 4.4e-06 55.1 83 38.6
Actinidia28703 Actinidia chinensis HOM05D008224 ORTHO05D010083 5.8e-06 54.7 107 38.3
Sp2g30460 Schrenkiella parvula HOM05D014245 ORTHO05D010083 7.6e-06 54.3 82 40.2
CARHR281490 Cardamine hirsuta HOM05D014245 ORTHO05D010083 9.9e-06 53.9 83 38.6


User provided reference genes

Program Settings