Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0448G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 1.4e-33 145.6 68 100.0
ATR0464G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 4.7e-21 104.0 67 70.1
ATR0968G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 6.8e-20 100.1 67 68.7
ATR0495G004 Amborella trichopoda HOM05D000023 ORTHO05D000014 2.6e-19 98.2 67 65.7
ATR0991G005 Amborella trichopoda HOM05D000023 ORTHO05D000014 7.5e-19 96.7 66 63.6
ATR1159G080 Amborella trichopoda HOM05D000023 ORTHO05D000014 1.7e-18 95.5 65 64.6
ATR0495G021 Amborella trichopoda HOM05D000023 ORTHO05D000014 4.1e-17 90.9 66 65.2
ATR0495G008 Amborella trichopoda HOM05D000023 ORTHO05D000014 5.3e-17 90.5 67 61.2
ATR0693G388 Amborella trichopoda HOM05D000023 ORTHO05D000014 6.5e-15 83.6 66 54.5
ATR0495G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 8.5e-15 83.2 65 61.5
ATR0605G374 Amborella trichopoda HOM05D000023 ORTHO05D000014 1.9e-14 82.0 66 62.1
vmacro21302 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.6e-13 79.0 65 52.3
vmacro21301 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.7e-13 78.2 65 52.3
SEGI_20337 Sequoiadendron giganteum HOM05D010104 ORTHO05D000014 3.6e-13 77.8 58 55.2
Hma1.2p1_0006F.1_g004740 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.7e-13 77.4 65 52.3
SEGI_15194 Sequoiadendron giganteum HOM05D010104 ORTHO05D000014 6.1e-13 77.0 64 53.1
RhsimUnG0210600 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.0e-12 74.3 65 47.7
ATR0629G050 Amborella trichopoda HOM05D000023 ORTHO05D000014 5.2e-12 73.9 52 61.5
RhsimUnG0179600 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.2e-12 73.9 65 47.7
vmacro03238 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.5e-11 72.4 65 49.2
vmacro01190 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.6e-11 71.6 65 43.1
vmacro22609 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.6e-11 71.6 65 43.1
Rhsim02G0002400 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.7e-11 70.5 65 41.5
Rhsim05G0125600 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.7e-11 70.5 65 41.5
SEGI_13201 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.7e-11 70.5 66 45.5
Hma1.2p1_1264F.1_g271330 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.2e-10 68.6 66 43.9
PSO170G2584 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-10 68.2 66 47.0
PSO500G0158 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-10 68.2 66 47.0
PSO591G0023 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-10 68.2 66 47.0
PSO063G5350 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-10 67.8 66 47.0
Ca_14478_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 8.3e-10 66.6 65 47.7
CSS0029210 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.1e-09 66.2 66 40.9
CSS0003700 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.8e-09 65.5 66 40.9
Hma1.2p1_0191F.1_g083200 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.8e-09 65.5 62 46.8
Hma1.2p1_0400F.1_g144380 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.1e-09 64.7 66 40.9
SEGI_09264 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.1e-09 64.7 67 41.8
SEGI_20252 Sequoiadendron giganteum HOM05D000861 ORTHO05D007385 3.1e-09 64.7 63 44.4
SEGI_29766 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 7.0e-09 63.5 63 47.6
vmacro00523 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 9.1e-09 63.2 63 44.4
vmacro21165 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 9.1e-09 63.2 63 44.4
Ca_13883_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-08 62.8 65 47.7
Hma1.2p1_0222F.1_g093680 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.6e-08 62.4 65 46.2
Hma1.2p1_0661F.1_g197850 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.6e-08 62.4 65 46.2
Nn2g13977 Nelumbo nucifera HOM05D000023 ORTHO05D000014 1.6e-08 62.4 66 39.4
Hma1.2p1_0017F.1_g011150 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.0e-08 62.0 65 44.6
Hma1.2p1_1425F.1_g282820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.0e-08 62.0 65 44.6
SEGI_35826 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.7e-08 61.6 68 41.2
SEGI_17547 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.5e-08 61.2 66 37.9
TWI23G0203 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.5e-08 61.2 67 44.8
vmacro15507 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 3.5e-08 61.2 63 42.9
Hma1.2p1_0619F.1_g190370 Hydrangea macrophylla HOM05D000023 ORTHO05D002258 5.9e-08 60.5 65 43.1
SEGI_32036 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.9e-08 60.5 57 47.4
vmacro21168 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 5.9e-08 60.5 62 43.5
Hma1.2p1_1937F.1_g308280 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.7e-08 60.1 65 44.6
Hma1.2p1_2537F.1_g324110 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.7e-08 60.1 65 44.6
QL10p011687 Quercus lobata HOM05D000023 ORTHO05D000014 7.7e-08 60.1 66 45.5
SEGI_24184 Sequoiadendron giganteum HOM05D003169 ORTHO05D000014 1.0e-07 59.7 66 42.4
ECA233G4406 Erigeron canadensis HOM05D000131 ORTHO05D000014 1.3e-07 59.3 66 37.9
SEGI_18045 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.3e-07 59.3 63 41.3
Hma1.2p1_0926F.1_g237530 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.7e-07 58.9 52 48.1
BcaC03g13508 Brassica carinata HOM05D000023 ORTHO05D000014 2.3e-07 58.5 67 40.3
Hma1.2p1_0801F.1_g220220 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.3e-07 58.5 65 43.1
COL.COLO4_06621 Corchorus olitorius HOM05D023965 ORTHO05D000014 2.9e-07 58.2 62 40.3
QL02p052017 Quercus lobata HOM05D000023 ORTHO05D000014 2.9e-07 58.2 66 43.9
QL02p079277 Quercus lobata HOM05D000023 ORTHO05D000014 2.9e-07 58.2 66 43.9
QL04p042141 Quercus lobata HOM05D000023 ORTHO05D000014 2.9e-07 58.2 66 43.9
QL05p053353 Quercus lobata HOM05D000023 ORTHO05D000014 2.9e-07 58.2 66 43.9
QL06p001114 Quercus lobata HOM05D000023 ORTHO05D000014 2.9e-07 58.2 66 43.9
QL06p025366 Quercus lobata HOM05D000023 ORTHO05D000014 2.9e-07 58.2 66 43.9
QL10p053741 Quercus lobata HOM05D000023 ORTHO05D000014 2.9e-07 58.2 66 43.9
QL11p043807 Quercus lobata HOM05D000023 ORTHO05D000014 2.9e-07 58.2 66 43.9
QL11p051169 Quercus lobata HOM05D000023 ORTHO05D000014 2.9e-07 58.2 66 43.9
SEGI_01977 Sequoiadendron giganteum HOM05D002039 ORTHO05D005834 2.9e-07 58.2 66 42.4
SEGI_32590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.9e-07 58.2 65 40.0
SEGI_02352 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.0e-07 57.4 66 42.4
Ah.01g016760 Amaranthus hybridus HOM05D000023 ORTHO05D000014 6.6e-07 57.0 66 40.9
arahy.Tifrunner.gnm1.ann1.1V5VYE Arachis hypogaea HOM05D000023 ORTHO05D000014 6.6e-07 57.0 67 38.8
BcaC03g13506 Brassica carinata HOM05D000023 ORTHO05D000014 6.6e-07 57.0 67 38.8
Cpa.g.sc47.51 Carica papaya HOM05D000023 ORTHO05D000014 6.6e-07 57.0 64 39.1
COL.COLO4_27211 Corchorus olitorius HOM05D000023 ORTHO05D000014 6.6e-07 57.0 65 40.0
ECA233G1350 Erigeron canadensis HOM05D000023 ORTHO05D000001 6.6e-07 57.0 66 37.9
Hma1.2p1_1081F.1_g255100 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.6e-07 57.0 56 46.4
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 6.6e-07 57.0 67 40.3
RhsimUnG0179400 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.6e-07 57.0 65 40.0
TPR.G26330 Trifolium pratense HOM05D000023 ORTHO05D000014 6.6e-07 57.0 67 40.3
TPR.G6135 Trifolium pratense HOM05D000023 ORTHO05D000014 6.6e-07 57.0 67 41.8
arahy.Tifrunner.gnm1.ann1.3H2HJM Arachis hypogaea HOM05D000023 ORTHO05D000014 8.6e-07 56.6 67 38.8
arahy.Tifrunner.gnm1.ann1.HID98C Arachis hypogaea HOM05D000023 ORTHO05D000014 8.6e-07 56.6 67 38.8
Hma1.2p1_0895F.1_g233690 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.6e-07 56.6 67 38.8
Hma1.2p1_1288F.1_g273310 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.6e-07 56.6 67 38.8
RcHm_v2.0_Chr7g0223471 Rosa chinensis HOM05D000023 ORTHO05D002258 8.6e-07 56.6 64 46.9
SEGI_27926 Sequoiadendron giganteum HOM05D004798 ORTHO05D000014 8.6e-07 56.6 62 43.5
Actinidia06841 Actinidia chinensis HOM05D000023 ORTHO05D000014 1.1e-06 56.2 65 38.5
Ca_26013_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 1.1e-06 56.2 52 48.1
Dinv29417 Davidia involucrata HOM05D000023 ORTHO05D000014 1.1e-06 56.2 67 37.3
PSO339G2310 Papaver somniferum HOM05D000023 ORTHO05D000014 1.1e-06 56.2 67 40.3
SEGI_36132 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.1e-06 56.2 66 36.4
TPR.G27515 Trifolium pratense HOM05D000023 ORTHO05D000014 1.1e-06 56.2 67 40.3
arahy.Tifrunner.gnm1.ann1.B0DQ39 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.5e-06 55.8 67 38.8
arahy.Tifrunner.gnm1.ann1.CHR5JU Arachis hypogaea HOM05D000023 ORTHO05D000014 1.5e-06 55.8 67 38.8
arahy.Tifrunner.gnm1.ann1.LZ7HA6 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.5e-06 55.8 67 38.8
arahy.Tifrunner.gnm1.ann1.UX9V95 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.5e-06 55.8 67 38.8
HanXRQChr06g0171651 Helianthus annuus HOM05D000023 ORTHO05D000014 1.5e-06 55.8 66 36.4
SEGI_40053 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.5e-06 55.8 65 38.5
arahy.Tifrunner.gnm1.ann1.47Q9LE Arachis hypogaea HOM05D000023 ORTHO05D000014 1.9e-06 55.5 66 37.9
Hma1.2p1_0084F.1_g042920 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.9e-06 55.5 53 49.1
Hma1.2p1_1578F.1_g291740 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.9e-06 55.5 53 49.1
PSO357G0123 Papaver somniferum HOM05D000023 ORTHO05D000014 1.9e-06 55.5 67 40.3
SEGI_37625 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.9e-06 55.5 63 42.9
Ca_31107_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 2.5e-06 55.1 65 43.1
SEGI_06292 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.5e-06 55.1 65 35.4
SEGI_11113 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.5e-06 55.1 65 36.9
arahy.Tifrunner.gnm1.ann1.I3U4BT Arachis hypogaea HOM05D000023 ORTHO05D000014 3.3e-06 54.7 70 38.6
EL10Ac9g21066 Beta vulgaris HOM05D000023 ORTHO05D000014 3.3e-06 54.7 66 40.9
Dinv07359 Davidia involucrata HOM05D000023 ORTHO05D018230 3.3e-06 54.7 62 37.1
Rhsim04G0118200 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.3e-06 54.7 49 49.0
SEGI_02520 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.3e-06 54.7 66 33.3
SEGI_06975 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.3e-06 54.7 66 33.3
SEGI_28317 Sequoiadendron giganteum HOM05D004541 ORTHO05D006163 3.3e-06 54.7 66 33.3
SEGI_31530 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.3e-06 54.7 65 38.5
SEGI_32897 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.3e-06 54.7 66 36.4
SEGI_35541 Sequoiadendron giganteum HOM05D004798 ORTHO05D005809 3.3e-06 54.7 62 40.3
arahy.Tifrunner.gnm1.ann1.GA19A6 Arachis hypogaea HOM05D000023 ORTHO05D000014 4.2e-06 54.3 67 38.8
AUR62044734 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.2e-06 54.3 68 38.2
Cre04.g217961 Chlamydomonas reinhardtii HOM05D000023 ORTHO05D000014 4.2e-06 54.3 66 40.9
MD17G1176800 Malus domestica HOM05D000023 ORTHO05D000014 4.2e-06 54.3 66 42.4
SEGI_05659 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.2e-06 54.3 65 36.9
SEGI_28079 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.2e-06 54.3 65 36.9
SEGI_28721 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.2e-06 54.3 65 36.9
SEGI_30239 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.2e-06 54.3 65 36.9
SEGI_38610 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.2e-06 54.3 65 36.9
SEGI_40819 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.2e-06 54.3 65 36.9
TPR.G17787 Trifolium pratense HOM05D000023 ORTHO05D000014 4.2e-06 54.3 67 38.8
TWI39G1161 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.2e-06 54.3 67 37.3
arahy.Tifrunner.gnm1.ann1.F23DGP Arachis hypogaea HOM05D000023 ORTHO05D000014 5.5e-06 53.9 66 36.4
arahy.Tifrunner.gnm1.ann1.KV4G29 Arachis hypogaea HOM05D000023 ORTHO05D000014 5.5e-06 53.9 66 36.4
arahy.Tifrunner.gnm1.ann1.QM4BK9 Arachis hypogaea HOM05D000023 ORTHO05D000014 5.5e-06 53.9 66 36.4
CSS0031929 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.5e-06 53.9 66 40.9
CSS0048742 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.5e-06 53.9 66 39.4
FvH4_2g16371 Fragaria vesca HOM05D000023 ORTHO05D000014 5.5e-06 53.9 65 41.5
MD11G1156100 Malus domestica HOM05D000023 ORTHO05D000014 5.5e-06 53.9 67 32.8
QL10p037399 Quercus lobata HOM05D000023 ORTHO05D000014 5.5e-06 53.9 67 37.3
SEGI_09032 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.5e-06 53.9 63 36.5
SEGI_36283 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.5e-06 53.9 65 38.5
arahy.Tifrunner.gnm1.ann1.AS3ZE6 Arachis hypogaea HOM05D000023 ORTHO05D000014 7.2e-06 53.5 67 37.3
CSS0002975 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.2e-06 53.5 66 39.4
AUR62019609 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.2e-06 53.5 68 38.2
Os02g0513700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 7.2e-06 53.5 66 39.4
Os06g0658400 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 7.2e-06 53.5 66 39.4
SHI01150 Sapria himalayana HOM05D000023 ORTHO05D000014 7.2e-06 53.5 66 37.9
Hund00797 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.2e-06 53.5 68 32.4
SEGI_06105 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 7.2e-06 53.5 65 36.9
SEGI_16481 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 7.2e-06 53.5 65 36.9
SEGI_25032 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 7.2e-06 53.5 65 36.9
arahy.Tifrunner.gnm1.ann1.PMWG6R Arachis hypogaea HOM05D000023 ORTHO05D000014 9.5e-06 53.1 67 37.3
AUR62023951 Chenopodium quinoa HOM05D000023 ORTHO05D000014 9.5e-06 53.1 67 44.8
QL03p021217 Quercus lobata HOM05D000023 ORTHO05D000014 9.5e-06 53.1 67 37.3
SEGI_02209 Sequoiadendron giganteum HOM05D002022 ORTHO05D000014 9.5e-06 53.1 66 33.3
TPR.G19706 Trifolium pratense HOM05D000023 ORTHO05D000014 9.5e-06 53.1 67 38.8


User provided reference genes

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