Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0421G002 Amborella trichopoda HOM05D006394 ORTHO05D008057 1.0e-71 273.1 122 100.0
Hma1.2p1_0589F.1_g184775 Hydrangea macrophylla HOM05D006394 ORTHO05D008057 7.1e-28 127.5 113 57.5
Hma1.2p1_0743F.1_g211600 Hydrangea macrophylla HOM05D006394 ORTHO05D008057 9.3e-28 127.1 113 57.5
Cpa.g.sc6.241 Carica papaya HOM05D006394 ORTHO05D008057 2.1e-27 125.9 93 67.7
CSS0039773 Camellia sinensis var. sinensis HOM05D006394 ORTHO05D008057 2.7e-27 125.6 103 60.2
QL06p032614 Quercus lobata HOM05D006394 ORTHO05D008057 3.5e-27 125.2 90 67.8
ClCG01G020230 Citrullus lanatus HOM05D006394 ORTHO05D008057 1.7e-26 122.9 115 54.8
vmacro21917 Vaccinium macrocarpon HOM05D006394 ORTHO05D008057 1.7e-26 122.9 124 56.5
Sabra05G0094200 Salix brachista HOM05D006394 ORTHO05D008057 9.6e-25 117.1 93 59.1
Sed0000291 Sechium edule HOM05D006394 ORTHO05D008057 1.8e-23 112.8 90 60.0
Lj2C467T3 Lonicera japonica HOM05D006394 ORTHO05D008057 1.5e-22 109.8 78 71.8
SalBow3G1310 Salvia bowleyana HOM05D006394 ORTHO05D008057 1.1e-20 103.6 83 63.9
MD02G1133300 Malus domestica HOM05D006394 ORTHO05D008057 3.2e-20 102.1 106 51.9
Actinidia28701 Actinidia chinensis HOM05D006394 ORTHO05D008057 9.3e-20 100.5 68 70.6
TPR.G30047 Trifolium pratense HOM05D006394 ORTHO05D008057 1.6e-16 89.7 96 54.2
Dinv33624 Davidia involucrata HOM05D006394 ORTHO05D008057 3.6e-16 88.6 122 43.4
Solyc10g038030.3 Solanum lycopersicum HOM05D006394 ORTHO05D008057 9.0e-15 84.0 92 48.9
CAN.G1735.1 Capsicum annuum HOM05D006394 ORTHO05D008057 2.0e-14 82.8 119 42.0
Prupe.7G167400 Prunus persica HOM05D006394 ORTHO05D008057 7.6e-14 80.9 122 42.6
Duzib264G0144 Durio zibethinus HOM05D006394 ORTHO05D008057 9.9e-14 80.5 122 41.0
Actinidia22984 Actinidia chinensis HOM05D006394 ORTHO05D008057 1.3e-13 80.1 122 40.2
Rhsim10G0213000 Rhododendron simsii HOM05D006394 ORTHO05D008057 1.3e-13 80.1 122 41.8
CiPaw.07G057900 Carya illinoinensis HOM05D006394 ORTHO05D008057 1.7e-13 79.7 122 40.2
Potri.005G115100 Populus trichocarpa HOM05D006394 ORTHO05D008057 2.9e-13 79.0 122 37.7
Haze_03772 Corylus avellana HOM05D006394 ORTHO05D008057 4.9e-13 78.2 120 40.0
TWI53G2075 Tripterygium wilfordii HOM05D006394 ORTHO05D008057 6.4e-13 77.8 118 39.8
GSVIVG01018789001 Vitis vinifera HOM05D006394 ORTHO05D008057 6.4e-13 77.8 120 40.0
Gohir.A10G098200 Gossypium hirsutum HOM05D006394 ORTHO05D008057 8.4e-13 77.4 122 40.2
Gohir.D10G090000 Gossypium hirsutum HOM05D006394 ORTHO05D008057 8.4e-13 77.4 122 40.2
Thecc.01G019800 Theobroma cacao HOM05D006394 ORTHO05D008057 8.4e-13 77.4 120 40.8
Ciclev10025906m.g Citrus clementina HOM05D006394 ORTHO05D008057 1.9e-12 76.3 122 40.2
Cc07_g10630 Coffea canephora HOM05D006394 ORTHO05D008057 1.9e-12 76.3 122 36.9
Gorai.011G098800 Gossypium raimondii HOM05D006394 ORTHO05D008057 4.2e-12 75.1 121 39.7
Nitab4.5_0006119g0030 Nicotiana tabacum HOM05D006394 ORTHO05D008057 4.2e-12 75.1 119 40.3
MELO3C007895.2 Cucumis melo HOM05D006394 ORTHO05D008057 5.4e-12 74.7 122 37.7
CsaV3_6G047020 Cucumis sativus L. HOM05D006394 ORTHO05D008057 5.4e-12 74.7 122 37.7
Eucgr.J02427 Eucalyptus grandis HOM05D006394 ORTHO05D008057 5.4e-12 74.7 121 40.5
PSO541G5117 Papaver somniferum HOM05D006394 ORTHO05D008057 5.4e-12 74.7 120 40.0
Aqoxy2G01815 Aquilegia oxysepala HOM05D006394 ORTHO05D008057 7.1e-12 74.3 121 38.0
Nitab4.5_0000438g0030 Nicotiana tabacum HOM05D006394 ORTHO05D008057 1.2e-11 73.6 119 39.5
COL.COLO4_21919 Corchorus olitorius HOM05D006394 ORTHO05D008057 1.6e-11 73.2 119 37.0
Gohir.A11G175800 Gossypium hirsutum HOM05D006394 ORTHO05D008057 2.1e-11 72.8 122 37.7
Gohir.D11G183600 Gossypium hirsutum HOM05D006394 ORTHO05D008057 2.1e-11 72.8 122 37.7
Gorai.007G195500 Gossypium raimondii HOM05D006394 ORTHO05D008057 2.1e-11 72.8 122 37.7
Peaxi162Scf00034g02720 Petunia axillaris HOM05D006394 ORTHO05D008057 2.7e-11 72.4 119 38.7
CANSAT01G2157 Cannabis sativa HOM05D006394 ORTHO05D008057 6.0e-11 71.2 124 38.7
TAR365G0979 Trochodendron aralioides HOM05D006394 ORTHO05D008057 7.9e-11 70.9 55 63.6
PSO675G2528 Papaver somniferum HOM05D006394 ORTHO05D008057 1.0e-10 70.5 120 37.5
Lsat_1_v5_gn_4_146641 Lactuca sativa HOM05D006394 ORTHO05D008057 1.3e-10 70.1 121 42.1
Solyc03g033560.3 Solanum lycopersicum HOM05D006394 ORTHO05D008057 1.3e-10 70.1 118 38.1
Ca_22372_v3 Cicer arietinum L. HOM05D006394 ORTHO05D008057 2.3e-10 69.3 121 38.0
Sopen03g006350 Solanum pennellii HOM05D006394 ORTHO05D008057 3.0e-10 68.9 118 37.3
HanXRQChr14g0441351 Helianthus annuus HOM05D006394 ORTHO05D008057 3.9e-10 68.6 120 35.8
Glyma.02G048900 Glycine max HOM05D006394 ORTHO05D008057 5.1e-10 68.2 115 38.3
Glyma.16G129000 Glycine max HOM05D006394 ORTHO05D008057 3.3e-09 65.5 121 36.4
arahy.Tifrunner.gnm1.ann1.SHNU8N Arachis hypogaea HOM05D006394 ORTHO05D008057 7.4e-09 64.3 123 35.8
arahy.Tifrunner.gnm1.ann1.VDMC0V Arachis hypogaea HOM05D006394 ORTHO05D008057 7.4e-09 64.3 123 35.8
Medtr8g075970 Medicago truncatula HOM05D006394 ORTHO05D008057 7.4e-09 64.3 122 34.4
VMungo0251G2040 Vigna mungo HOM05D006394 ORTHO05D008057 7.4e-09 64.3 121 35.5
DCAR_032392 Daucus carota HOM05D006394 ORTHO05D008057 1.6e-08 63.2 124 35.5
Lj4g0024758 Lotus japonicus HOM05D006394 ORTHO05D008057 2.8e-08 62.4 124 34.7
RcHm_v2.0_Chr2g0099531 Rosa chinensis HOM05D006394 ORTHO05D008057 2.8e-08 62.4 116 33.6
PGSC0003DMG400022563 Solanum tuberosum HOM05D006394 ORTHO05D008057 4.8e-08 61.6 52 59.6
TAR133G0002 Trochodendron aralioides HOM05D006394 ORTHO05D008057 8.1e-08 60.8 50 60.0
Psat4g099000 Pisum sativum HOM05D006394 ORTHO05D008057 3.1e-07 58.9 121 33.9
PGR102G2413 Punica granatum HOM05D006394 ORTHO05D008057 1.2e-06 57.0 114 36.0
MSTRG.2708 Avicennia marina HOM05D006394 ORTHO05D008057 3.4e-06 55.5 130 33.1
ECA238G0838 Erigeron canadensis HOM05D006394 ORTHO05D008057 3.4e-06 55.5 120 32.5
unitig_22.g6143 Utricularia gibba HOM05D006394 ORTHO05D008057 4.5e-06 55.1 118 33.9
Lalb_Chr09g0333101 Lupinus albus HOM05D006394 ORTHO05D008057 5.8e-06 54.7 121 31.4
FAN26G2471 Fragaria x ananassa HOM05D006394 ORTHO05D008057 7.6e-06 54.3 119 32.8
FvH4_1g11930 Fragaria vesca HOM05D006394 ORTHO05D008057 1.0e-05 53.9 119 32.8
FAN19G0259 Fragaria x ananassa HOM05D006394 ORTHO05D008057 1.0e-05 53.9 119 32.8
MD15G1246300 Malus domestica HOM05D006394 ORTHO05D008057 1.0e-05 53.9 122 33.6


User provided reference genes

Program Settings