Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 4.0e-30 134.0 65 100.0
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.2e-28 128.3 63 96.8
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 4.6e-26 120.6 63 88.9
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 1.8e-25 118.6 63 88.9
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 3.0e-25 117.9 63 87.3
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 6.7e-25 116.7 62 88.7
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 1.5e-24 115.5 62 87.1
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.9e-24 115.2 62 87.1
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 1.9e-24 115.2 62 83.9
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 2.5e-24 114.8 62 85.5
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 3.3e-24 114.4 62 83.9
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 4.3e-24 114.0 63 85.7
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 4.3e-24 114.0 63 84.1
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 5.6e-24 113.6 62 85.5
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 5.6e-24 113.6 63 84.1
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 7.4e-24 113.2 63 84.1
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.3e-23 112.5 62 83.9
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 1.3e-23 112.5 64 85.9
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 1.6e-23 112.1 63 82.5
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 1.6e-23 112.1 63 81.0
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 2.1e-23 111.7 63 81.0
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 2.8e-23 111.3 63 81.0
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 2.8e-23 111.3 63 81.0
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 2.8e-23 111.3 62 83.9
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 2.8e-23 111.3 62 83.9
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 3.7e-23 110.9 59 88.1
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 3.7e-23 110.9 62 83.9
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 3.7e-23 110.9 62 82.3
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 3.7e-23 110.9 63 81.0
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 3.7e-23 110.9 63 81.0
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 6.2e-23 110.2 62 82.3
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 6.2e-23 110.2 62 82.3
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 6.2e-23 110.2 63 81.0
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 8.1e-23 109.8 62 82.3
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 8.1e-23 109.8 62 82.3
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 8.1e-23 109.8 62 82.3
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.1e-22 109.4 62 79.0
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 1.4e-22 109.0 62 82.3
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.4e-22 109.0 62 79.0
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 1.8e-22 108.6 62 80.6
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 1.8e-22 108.6 62 80.6
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 1.8e-22 108.6 63 79.4
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 1.8e-22 108.6 60 80.0
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 1.8e-22 108.6 62 80.6
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 2.4e-22 108.2 66 78.8
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 3.1e-22 107.8 62 80.6
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 3.1e-22 107.8 63 79.4
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 4.0e-22 107.5 62 82.3
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 4.0e-22 107.5 59 84.7
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 4.0e-22 107.5 62 79.0
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 4.0e-22 107.5 64 84.4
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 5.3e-22 107.1 62 80.6
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 5.3e-22 107.1 62 80.6
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 5.3e-22 107.1 64 81.2
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 6.9e-22 106.7 62 80.6
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 9.0e-22 106.3 63 76.2
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 9.0e-22 106.3 62 82.3
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 9.0e-22 106.3 62 77.4
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.2e-21 105.9 63 76.2
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 1.2e-21 105.9 63 76.2
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 1.2e-21 105.9 62 80.6
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 1.2e-21 105.9 62 80.6
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 1.5e-21 105.5 63 81.0
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 2.0e-21 105.1 62 74.2
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 2.0e-21 105.1 62 79.0
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.0e-21 105.1 62 79.0
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.0e-21 105.1 62 79.0
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.0e-21 105.1 63 76.2
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 2.6e-21 104.8 62 77.4
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 2.6e-21 104.8 62 79.0
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 5.8e-21 103.6 62 79.0
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 7.6e-21 103.2 63 73.0
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.0e-20 102.8 58 81.0
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 1.3e-20 102.4 63 79.4
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 1.7e-20 102.1 63 79.4
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 1.7e-20 102.1 63 74.6
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 2.9e-20 101.3 64 75.0
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 3.8e-20 100.9 63 76.2
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 3.8e-20 100.9 66 74.2
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 4.9e-20 100.5 65 78.5
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 4.9e-20 100.5 63 74.6
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 8.4e-20 99.8 65 73.8
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 8.4e-20 99.8 65 73.8
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 8.4e-20 99.8 65 73.8
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 8.4e-20 99.8 65 73.8
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 8.4e-20 99.8 65 73.8
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 8.4e-20 99.8 63 74.6
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.1e-19 99.4 62 77.4
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.4e-19 99.0 59 76.3
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.4e-19 99.0 69 69.6
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 1.4e-19 99.0 63 74.6
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 1.4e-19 99.0 63 73.0
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 1.9e-19 98.6 63 73.0
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 9.3e-19 96.3 58 72.4
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 3.3e-16 87.8 60 70.0
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 6.3e-15 83.6 63 63.5
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 1.2e-13 79.3 65 60.0
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 1.0e-09 66.2 55 56.4
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 6.3e-07 57.0 32 81.2


User provided reference genes

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