Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0392G001 Amborella trichopoda HOM05D006604 ORTHO05D007974 1.8e-45 185.7 101 100.0
Lalb_Chr00c29g0408041 Lupinus albus HOM05D006604 ORTHO05D007974 3.1e-29 131.7 100 72.0
HanXRQChr11g0320231 Helianthus annuus HOM05D006604 ORTHO05D007974 1.2e-28 129.8 101 71.3
HanXRQMTg0579671 Helianthus annuus HOM05D006604 ORTHO05D007974 1.2e-28 129.8 101 71.3
AT2G07741 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 1.5e-28 129.4 101 71.3
ATMG00410 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 1.5e-28 129.4 101 71.3
ATMG01170 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 1.5e-28 129.4 101 71.3
CARHR282790 Cardamine hirsuta HOM05D006604 ORTHO05D007974 1.5e-28 129.4 101 71.3
CARHR283400 Cardamine hirsuta HOM05D006604 ORTHO05D007974 1.5e-28 129.4 101 71.3
BcaB06g27871 Brassica carinata HOM05D006604 ORTHO05D007974 2.0e-28 129.0 101 71.3
BolSC28t60307H Brassica oleracea HOM05D006604 ORTHO05D007974 2.0e-28 129.0 101 71.3
BolSC28t60364H Brassica oleracea HOM05D006604 ORTHO05D007974 2.0e-28 129.0 101 71.3
BraSC177t45762Z Brassica rapa HOM05D006604 ORTHO05D007974 2.0e-28 129.0 101 71.3
BraSC48t46229Z Brassica rapa HOM05D006604 ORTHO05D007974 2.0e-28 129.0 101 71.3
BraSC48t46317Z Brassica rapa HOM05D006604 ORTHO05D007974 2.0e-28 129.0 101 71.3
BraSC54t46362Z Brassica rapa HOM05D006604 ORTHO05D007974 2.0e-28 129.0 101 71.3
CANSAT16G0041 Cannabis sativa HOM05D006604 ORTHO05D007974 2.0e-28 129.0 101 71.3
HanXRQChr13g0388581 Helianthus annuus HOM05D006604 ORTHO05D007974 2.6e-28 128.6 101 70.3
SalBow1G2924 Salvia bowleyana HOM05D006604 ORTHO05D007974 1.0e-27 126.7 98 72.4
Lalb_Chr01g0011021 Lupinus albus HOM05D006604 ORTHO05D007974 5.0e-27 124.4 100 69.0
CAN.G659.3 Capsicum annuum HOM05D006604 ORTHO05D007974 1.0e-24 116.7 100 66.0
Gorai.001G160500 Gossypium raimondii HOM05D006604 ORTHO05D007974 3.0e-24 115.2 99 65.7
SHI50293 Sapria himalayana HOM05D006604 ORTHO05D007974 3.9e-24 114.8 100 64.0
SHI53023 Sapria himalayana HOM05D006604 ORTHO05D007974 3.9e-24 114.8 100 66.0
SHI36697 Sapria himalayana HOM05D006604 ORTHO05D007974 3.3e-23 111.7 99 63.6
SHI50562 Sapria himalayana HOM05D006604 ORTHO05D007974 3.3e-23 111.7 99 63.6
SMO053G0007 Selaginella moellendorffii HOM05D006604 ORTHO05D007974 5.7e-23 110.9 100 63.0
SHI36367 Sapria himalayana HOM05D006604 ORTHO05D007974 1.7e-22 109.4 99 63.6
CsaV3_UNG209110 Cucumis sativus L. HOM05D006604 ORTHO05D007974 3.7e-22 108.2 100 64.0
PGR028G0012 Punica granatum HOM05D006604 ORTHO05D007974 3.7e-22 108.2 100 62.0
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 4.8e-22 107.8 100 62.0
RcHm_v2.0_MTg0498771 Rosa chinensis HOM05D006604 ORTHO05D007974 4.8e-22 107.8 100 62.0
SGA_v2.0_scaffold245G44658 Striga asiatica HOM05D006604 ORTHO05D007974 4.8e-22 107.8 100 63.0
Sed0019535 Sechium edule HOM05D006604 ORTHO05D007974 8.2e-22 107.1 100 62.0
DCAR_032438 Daucus carota HOM05D006604 ORTHO05D007974 1.4e-21 106.3 100 61.0
Nitab4.5_0000859g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.8e-21 105.9 100 63.0
Nitab4.5_0006806g0110 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.8e-21 105.9 98 63.3
Nn1g10085 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.1e-21 105.1 100 63.0
LjContig00439g0024190 Lotus japonicus HOM05D006604 ORTHO05D007974 4.1e-21 104.8 100 61.0
Aqoxy12s025 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 5.3e-21 104.4 100 62.0
Aqoxy1G02966 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 5.3e-21 104.4 100 62.0
CARHR288250 Cardamine hirsuta HOM05D006604 ORTHO05D007974 9.1e-21 103.6 81 69.1
SEGI_30085 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.2e-20 103.2 100 61.0
SEGI_09870 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.5e-20 102.8 100 61.0
SEGI_38071 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.5e-20 102.8 100 61.0
TAR022G0004 Trochodendron aralioides HOM05D004537 ORTHO05D005492 2.6e-20 102.1 101 60.4
FAN20G1951 Fragaria x ananassa HOM05D006604 ORTHO05D007974 3.4e-20 101.7 100 59.0
arahy.Tifrunner.gnm1.ann1.QPI8J1 Arachis hypogaea HOM05D006604 ORTHO05D007974 4.5e-20 101.3 100 59.0
Lsat_1_v5_gn_5_16121 Lactuca sativa HOM05D006604 ORTHO05D007974 1.0e-19 100.1 82 69.5
SEGI_16408 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.0e-19 100.1 100 60.0
SHI37564 Sapria himalayana HOM05D006604 ORTHO05D007974 1.7e-19 99.4 99 60.6
SHI41364 Sapria himalayana HOM05D006604 ORTHO05D007974 2.6e-15 85.5 78 64.1
SHI42031 Sapria himalayana HOM05D006604 ORTHO05D007974 2.6e-15 85.5 78 64.1
SHI54324 Sapria himalayana HOM05D006604 ORTHO05D007974 4.4e-15 84.7 78 62.8
Nn044s41811 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.7e-14 81.6 76 63.2
Potri.014G168000 Populus trichocarpa HOM05D006604 ORTHO05D007974 7.0e-13 77.4 54 68.5
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 2.0e-12 75.9 80 56.2
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 2.0e-12 75.9 80 56.2
SHI53009 Sapria himalayana HOM05D006604 ORTHO05D007974 1.0e-11 73.6 77 55.8
SHI54304 Sapria himalayana HOM05D006604 ORTHO05D007974 2.9e-11 72.0 70 61.4
Sp3g25850 Schrenkiella parvula HOM05D006604 ORTHO05D007974 6.5e-11 70.9 62 67.7
ClCG06G009210 Citrullus lanatus HOM05D006604 ORTHO05D007974 1.1e-10 70.1 97 46.4
MELO3C027032.2 Cucumis melo HOM05D006604 ORTHO05D007974 7.2e-10 67.4 69 59.4
RcHm_v2.0_Chr7g0231141 Rosa chinensis HOM05D006604 ORTHO05D007974 7.2e-10 67.4 69 58.0
LjContig00439g0025482 Lotus japonicus HOM05D006604 ORTHO05D007974 2.1e-09 65.9 70 57.1
Glyma.16G133700 Glycine max HOM05D006604 ORTHO05D007974 2.7e-09 65.5 70 54.3
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 2.7e-09 65.5 44 72.7
Nn7g37740 Nelumbo nucifera HOM05D006604 ORTHO05D007974 1.4e-08 63.2 65 61.5
SHI28635 Sapria himalayana HOM05D006604 ORTHO05D007974 1.8e-08 62.8 98 44.9
GSVIVG01035307001 Vitis vinifera HOM05D000029 ORTHO05D001072 1.8e-08 62.8 43 74.4
ClCG00G004290 Citrullus lanatus HOM05D006604 ORTHO05D007974 3.0e-08 62.0 43 72.1
Peaxi162Scf00000g01811 Petunia axillaris HOM05D006604 ORTHO05D007974 3.0e-08 62.0 100 43.0
Cre01.g018800 Chlamydomonas reinhardtii HOM05D006604 ORTHO05D007974 4.0e-08 61.6 96 43.8
SHI01304 Sapria himalayana HOM05D006604 ORTHO05D007974 2.0e-07 59.3 44 63.6
MELO3C027524.2 Cucumis melo HOM05D006604 ORTHO05D007974 2.8e-06 55.5 61 55.7


User provided reference genes

Program Settings