Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0342G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 6.7e-78 293.9 144 100.0
ATR1002G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 3.7e-76 288.1 144 97.9
ATR0882G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 4.8e-76 287.7 144 97.2
ATR1016G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.4e-75 286.2 144 97.9
ATR0049G066 Amborella trichopoda HOM05D004423 ORTHO05D005464 5.3e-75 284.3 144 97.2
ATR0116G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 4.1e-67 258.1 140 90.0
ATR0564G023 Amborella trichopoda HOM05D004423 ORTHO05D005464 9.1e-67 256.9 140 90.7
ATR0045G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.3e-65 253.1 140 87.9
ATR0626G235 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.1e-64 250.0 141 87.2
ATR0757G159 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.5e-64 249.6 140 85.7
ATR0316G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 5.5e-64 247.7 140 85.7
ATR0322G068 Amborella trichopoda HOM05D004423 ORTHO05D005464 5.9e-58 227.6 135 83.7
ATR0733G014 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.5e-53 213.0 108 96.3
ATR0757G178 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.1e-48 196.8 114 85.1
ATR0796G217 Amborella trichopoda HOM05D004423 ORTHO05D005464 2.1e-42 176.0 95 88.4
Dinv41903 Davidia involucrata HOM05D004423 ORTHO05D005464 1.3e-25 120.2 144 41.7
Hma1.2p1_0032F.1_g019020 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 5.6e-24 114.8 149 43.0
Actinidia18027 Actinidia chinensis HOM05D004423 ORTHO05D005464 2.1e-23 112.8 150 39.3
PSO782G0263 Papaver somniferum HOM05D004423 ORTHO05D005464 2.1e-23 112.8 152 42.8
Actinidia20541 Actinidia chinensis HOM05D004423 ORTHO05D005464 1.4e-22 110.2 152 38.2
PSO063G1777 Papaver somniferum HOM05D004423 ORTHO05D005464 1.8e-22 109.8 152 42.1
TAR376G0159 Trochodendron aralioides HOM05D004423 ORTHO05D005464 2.4e-22 109.4 143 42.7
GSVIVG01023952001 Vitis vinifera HOM05D004423 ORTHO05D005464 3.1e-22 109.0 144 39.6
CiPaw.05G087000 Carya illinoinensis HOM05D004423 ORTHO05D005464 4.0e-22 108.6 142 43.0
Lj5C174T8 Lonicera japonica HOM05D004423 ORTHO05D005464 5.2e-22 108.2 142 40.8
CsaV3_6G012570 Cucumis sativus L. HOM05D004423 ORTHO05D005464 9.0e-22 107.5 155 38.1
MBI01_g09373_MAGBIO Magnolia biondii HOM05D004423 ORTHO05D005464 9.0e-22 107.5 159 40.3
Manes.11G100750 Manihot esculenta HOM05D004423 ORTHO05D005464 9.0e-22 107.5 153 37.3
Cfa005315 Carpinus fangiana HOM05D004423 ORTHO05D005464 3.4e-21 105.5 142 40.8
Atru.chr5.3471 Acer truncatum HOM05D004423 ORTHO05D005464 4.4e-21 105.1 148 38.5
Duzib132G0529 Durio zibethinus HOM05D004423 ORTHO05D005464 4.4e-21 105.1 152 38.8
Nn7g38050 Nelumbo nucifera HOM05D004423 ORTHO05D005464 5.8e-21 104.8 148 39.2
Cpa.g.sc20.132 Carica papaya HOM05D004423 ORTHO05D005464 7.6e-21 104.4 148 35.8
Oeu045082.1 Olea europaea HOM05D004423 ORTHO05D005464 9.9e-21 104.0 131 43.5
Aqoxy2G04085 Aquilegia oxysepala HOM05D004423 ORTHO05D005464 1.3e-20 103.6 140 44.3
ClCG02G011090 Citrullus lanatus HOM05D004423 ORTHO05D005464 1.3e-20 103.6 141 38.3
CANSAT25G0289 Cannabis sativa HOM05D004423 ORTHO05D005464 1.7e-20 103.2 146 38.4
Haze_02070 Corylus avellana HOM05D004423 ORTHO05D005464 1.7e-20 103.2 142 40.1
Gorai.002G201600 Gossypium raimondii HOM05D004423 ORTHO05D005464 1.7e-20 103.2 155 35.5
Peaxi162Scf00362g00356 Petunia axillaris HOM05D004423 ORTHO05D005464 1.7e-20 103.2 130 46.2
Solyc01g111910.3 Solanum lycopersicum HOM05D004423 ORTHO05D005464 1.7e-20 103.2 129 45.7
Sopen01g053960 Solanum pennellii HOM05D004423 ORTHO05D005464 1.7e-20 103.2 129 45.7
Thecc.02G052800 Theobroma cacao HOM05D004423 ORTHO05D005464 1.7e-20 103.2 152 36.8
QL11p053191 Quercus lobata HOM05D004423 ORTHO05D005464 3.8e-20 102.1 142 38.0
Sabra09G0108500 Salix brachista HOM05D004423 ORTHO05D005464 3.8e-20 102.1 156 35.3
Gohir.D01G162500 Gossypium hirsutum HOM05D004423 ORTHO05D005464 4.9e-20 101.7 155 34.2
Ca_05030_v3 Cicer arietinum L. HOM05D004423 ORTHO05D005464 6.4e-20 101.3 153 41.2
PGR042G3292 Punica granatum HOM05D004423 ORTHO05D005464 8.4e-20 100.9 157 36.9
Sc18g0006140 Simmondsia chinensis HOM05D004423 ORTHO05D005464 8.4e-20 100.9 142 40.1
MELO3C013664.2 Cucumis melo HOM05D004423 ORTHO05D005464 1.4e-19 100.1 155 36.8
Gohir.A01G171600 Gossypium hirsutum HOM05D004423 ORTHO05D005464 1.4e-19 100.1 155 34.2
Potri.009G139900 Populus trichocarpa HOM05D004423 ORTHO05D005464 1.9e-19 99.8 156 34.6
Sp7g37340 Schrenkiella parvula HOM05D004423 ORTHO05D005464 1.9e-19 99.8 134 43.3
Rhsim11G0195000 Rhododendron simsii HOM05D004423 ORTHO05D005464 2.4e-19 99.4 160 36.9
ECA246G1499 Erigeron canadensis HOM05D004423 ORTHO05D005464 3.2e-19 99.0 145 42.1
Sed0008640 Sechium edule HOM05D004423 ORTHO05D005464 3.2e-19 99.0 142 37.3
TWI75G0836 Tripterygium wilfordii HOM05D004423 ORTHO05D005464 3.2e-19 99.0 146 40.4
SalBow1G2566 Salvia bowleyana HOM05D004423 ORTHO05D000248 4.2e-19 98.6 151 37.1
Nitab4.5_0003679g0020 Nicotiana tabacum HOM05D004423 ORTHO05D005464 5.4e-19 98.2 129 44.2
arahy.Tifrunner.gnm1.ann1.CJIC4D Arachis hypogaea HOM05D004423 ORTHO05D005464 7.1e-19 97.8 151 38.4
arahy.Tifrunner.gnm1.ann1.YN7PRK Arachis hypogaea HOM05D004423 ORTHO05D005464 7.1e-19 97.8 151 38.4
CARHR294170 Cardamine hirsuta HOM05D004423 ORTHO05D005464 1.2e-18 97.1 134 41.0
AUR62012983 Chenopodium quinoa HOM05D004423 ORTHO05D005464 1.6e-18 96.7 145 38.6
Lalb_Chr17g0341361 Lupinus albus HOM05D004423 ORTHO05D005464 1.6e-18 96.7 152 38.2
CAN.G1235.36 Capsicum annuum HOM05D004423 ORTHO05D005464 2.1e-18 96.3 129 42.6
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 2.1e-18 96.3 131 45.0
MD05G1128200 Malus domestica HOM05D004423 ORTHO05D005464 2.1e-18 96.3 154 39.0
SGA_v2.0_scaffold58G20334 Striga asiatica HOM05D004423 ORTHO05D005464 2.1e-18 96.3 145 38.6
Carub.0007s0033 Capsella rubella HOM05D004423 ORTHO05D005464 2.7e-18 95.9 144 40.3
HanXRQChr17g0543821 Helianthus annuus HOM05D004423 ORTHO05D005464 3.5e-18 95.5 139 41.0
MD10G1131500 Malus domestica HOM05D004423 ORTHO05D005464 3.5e-18 95.5 145 36.6
SalBow1G3590 Salvia bowleyana HOM05D004423 ORTHO05D005464 3.5e-18 95.5 151 36.4
Aa31LG6G16860 Aethionema arabicum HOM05D004423 ORTHO05D005464 4.6e-18 95.1 148 41.9
Ciclev10027678m.g Citrus clementina HOM05D004423 ORTHO05D005464 4.6e-18 95.1 138 39.1
TPR.G38573 Trifolium pratense HOM05D004423 ORTHO05D005464 4.6e-18 95.1 142 39.4
Migut.B00041 Erythranthe guttata HOM05D004423 ORTHO05D005464 6.0e-18 94.7 151 35.1
AL7G10310 Arabidopsis lyrata HOM05D004423 ORTHO05D005464 7.8e-18 94.4 132 41.7
FAN15G2581 Fragaria x ananassa HOM05D004423 ORTHO05D005464 7.8e-18 94.4 159 37.1
Glyma.01G063600 Glycine max HOM05D004423 ORTHO05D005464 7.8e-18 94.4 149 39.6
Glyma.02G121200 Glycine max HOM05D004423 ORTHO05D005464 1.0e-17 94.0 149 38.3
AUR62009995 Chenopodium quinoa HOM05D004423 ORTHO05D005464 1.3e-17 93.6 138 39.9
FAN27G3078 Fragaria x ananassa HOM05D004423 ORTHO05D005464 1.3e-17 93.6 159 36.5
Medtr1g031840 Medicago truncatula HOM05D004423 ORTHO05D005464 1.7e-17 93.2 142 37.3
Medtr5g046240 Medicago truncatula HOM05D004423 ORTHO05D005464 1.7e-17 93.2 142 37.3
Phvul.003G039700 Phaseolus vulgaris HOM05D004423 ORTHO05D005464 1.7e-17 93.2 149 38.9
Psat2g133680 Pisum sativum HOM05D004423 ORTHO05D005464 1.7e-17 93.2 142 37.3
vmacro02301 Vaccinium macrocarpon HOM05D004423 ORTHO05D005464 1.7e-17 93.2 150 34.0
VMungo1215G3113 Vigna mungo HOM05D004423 ORTHO05D005464 1.7e-17 93.2 149 38.3
Prupe.8G172300 Prunus persica HOM05D004423 ORTHO05D005464 2.3e-17 92.8 142 35.9
Os06g0574400 Oryza sativa ssp. japonica HOM05D004423 ORTHO05D005464 3.0e-17 92.4 128 42.2
AT4G38440 Arabidopsis thaliana HOM05D004423 ORTHO05D005464 3.9e-17 92.0 132 40.9
FAN20G1295 Fragaria x ananassa HOM05D004423 ORTHO05D005464 3.9e-17 92.0 154 37.0
Cc00_g02430 Coffea canephora HOM05D004423 ORTHO05D005464 5.1e-17 91.7 150 40.7
Lj2g0017242 Lotus japonicus HOM05D004423 ORTHO05D005464 5.1e-17 91.7 155 36.8
Zm00001eb385260 Zea mays HOM05D004423 ORTHO05D005464 5.1e-17 91.7 130 40.8
FAN24G1532 Fragaria x ananassa HOM05D004423 ORTHO05D005464 6.6e-17 91.3 159 36.5
Thhalv10024216m.g Eutrema salsugineum HOM05D004423 ORTHO05D005464 8.7e-17 90.9 134 41.0
BraA04t16972Z Brassica rapa HOM05D004423 ORTHO05D005464 1.1e-16 90.5 138 42.0
RcHm_v2.0_Chr6g0279371 Rosa chinensis HOM05D004423 ORTHO05D005464 1.1e-16 90.5 144 36.8
unitig_21.g20846 Utricularia gibba HOM05D004423 ORTHO05D005464 1.1e-16 90.5 154 36.4
C04p46880 Brassica napus HOM05D004423 ORTHO05D005464 1.9e-16 89.7 147 40.1
BolC4t26280H Brassica oleracea HOM05D004423 ORTHO05D005464 1.9e-16 89.7 147 40.1
Eucgr.E03994 Eucalyptus grandis HOM05D004423 ORTHO05D005464 1.9e-16 89.7 144 33.3
EL10Ac9g21318 Beta vulgaris HOM05D004423 ORTHO05D005464 2.5e-16 89.4 134 42.5
FvH4_2g15920 Fragaria vesca HOM05D004423 ORTHO05D005464 2.5e-16 89.4 144 36.8
Ah.01g008070 Amaranthus hybridus HOM05D004423 ORTHO05D005464 5.6e-16 88.2 152 33.6
A04p13130 Brassica napus HOM05D004423 ORTHO05D005464 5.6e-16 88.2 138 41.3
Eucgr.G01811 Eucalyptus grandis HOM05D004423 ORTHO05D005464 5.6e-16 88.2 144 33.3
Hund06453 Selenicereus undatus HOM05D004423 ORTHO05D005464 7.3e-16 87.8 151 36.4
SHI08411 Sapria himalayana HOM05D004423 ORTHO05D005464 2.1e-15 86.3 115 41.7
SEGI_28605 Sequoiadendron giganteum HOM05D004423 ORTHO05D005464 2.8e-15 85.9 150 37.3
HPP92_023981 Vanilla planifolia HOM05D004423 ORTHO05D005464 2.8e-15 85.9 137 38.0
DCAR_022414 Daucus carota HOM05D004423 ORTHO05D005464 1.1e-14 84.0 148 36.5
THA.LOC104824748 Tarenaya hassleriana HOM05D004423 ORTHO05D005464 1.8e-14 83.2 134 38.8
SHI46553 Sapria himalayana HOM05D004423 ORTHO05D005464 5.8e-13 78.2 105 41.0
Haze_02078 Corylus avellana HOM05D004423 ORTHO05D005464 2.4e-11 72.8 124 35.5
BcaB06g27461 Brassica carinata HOM05D004423 ORTHO05D005464 1.2e-10 70.5 77 46.8
CDE09G0751 Ceratophyllum demersum HOM05D004423 ORTHO05D005464 1.2e-10 70.5 73 46.6
HPP92_024002 Vanilla planifolia HOM05D004423 ORTHO05D005464 1.0e-09 67.4 127 33.9
AagrBONN_evm.TU.Sc2ySwM_369.194 Anthoceros agrestis HOM05D004423 ORTHO05D005464 1.9e-08 63.2 108 36.1
Mapoly0006s0149 Marchantia polymorpha HOM05D004423 ORTHO05D005464 1.6e-07 60.1 128 34.4
ATR0598G019 Amborella trichopoda HOM05D004423 ORTHO05D005464 2.8e-07 59.3 28 92.9
Hma1.2p1_0032F.1_g019040 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 6.2e-07 58.2 56 48.2
Pp3c6_25040 Physcomitrium patens HOM05D004423 ORTHO05D005464 8.1e-07 57.8 121 32.2
SMO119G0387 Selaginella moellendorffii HOM05D004423 ORTHO05D005464 6.9e-06 54.7 137 34.3


User provided reference genes

Program Settings