Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 2.2e-124 449.1 250 100.0
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 1.2e-87 327.0 243 77.0
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 8.9e-86 320.9 241 78.4
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 5.8e-85 318.2 243 74.5
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 1.1e-83 313.9 242 71.1
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 4.2e-83 312.0 243 73.7
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 7.1e-83 311.2 182 81.3
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 7.1e-83 311.2 240 64.6
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 9.3e-83 310.8 243 64.6
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 9.3e-83 310.8 243 74.1
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 1.2e-82 310.5 240 70.4
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 1.6e-82 310.1 182 81.9
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 4.6e-82 308.5 240 75.8
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 1.0e-81 307.4 243 68.3
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 1.0e-81 307.4 276 59.4
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 1.3e-81 307.0 242 75.6
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 1.7e-81 306.6 180 81.7
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 3.0e-81 305.8 183 80.3
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 5.1e-81 305.1 241 75.1
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 5.1e-81 305.1 183 78.1
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 8.7e-81 304.3 183 78.1
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 1.1e-80 303.9 242 71.1
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 1.5e-80 303.5 183 79.2
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 1.5e-80 303.5 183 77.6
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 2.5e-80 302.8 242 70.7
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 2.5e-80 302.8 244 73.4
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 2.5e-80 302.8 246 74.4
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 3.3e-80 302.4 179 82.1
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 4.3e-80 302.0 243 72.8
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 4.3e-80 302.0 180 80.6
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 5.6e-80 301.6 246 66.3
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 7.3e-80 301.2 183 77.0
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 7.3e-80 301.2 241 73.9
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 9.6e-80 300.8 181 80.1
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 1.3e-79 300.4 179 78.8
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 1.3e-79 300.4 180 80.6
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 2.1e-79 299.7 183 78.1
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 2.1e-79 299.7 182 79.7
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 3.6e-79 298.9 250 72.8
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 3.6e-79 298.9 240 70.8
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 4.8e-79 298.5 181 79.0
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 1.1e-78 297.4 245 72.7
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.4e-78 297.0 245 72.2
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 1.8e-78 296.6 182 78.6
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 1.8e-78 296.6 180 78.9
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 5.3e-78 295.0 177 79.7
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 5.3e-78 295.0 180 78.3
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 6.9e-78 294.7 240 70.8
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 6.9e-78 294.7 183 74.3
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 9.0e-78 294.3 183 76.5
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 9.0e-78 294.3 177 80.2
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 2.0e-77 293.1 296 60.5
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 2.6e-77 292.7 183 75.4
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 2.6e-77 292.7 246 72.8
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 3.4e-77 292.4 183 75.4
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 5.8e-77 291.6 177 79.7
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 9.9e-77 290.8 274 63.5
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 1.3e-76 290.4 179 79.3
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 1.7e-76 290.0 240 61.7
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 2.2e-76 289.7 168 81.5
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 3.8e-76 288.9 184 76.6
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 3.8e-76 288.9 179 77.1
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 4.9e-76 288.5 240 69.6
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 8.4e-76 287.7 240 70.4
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 1.1e-75 287.3 177 76.8
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 1.4e-75 287.0 240 69.2
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 1.9e-75 286.6 240 70.4
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 4.2e-75 285.4 168 80.4
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 7.1e-75 284.6 240 69.6
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 1.6e-74 283.5 240 69.2
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 1.3e-73 280.4 270 65.6
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 3.0e-73 279.3 249 62.2
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 2.5e-72 276.2 163 81.0
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 7.4e-72 274.6 267 55.1
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 1.6e-71 273.5 169 75.7
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 3.6e-71 272.3 171 77.8
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 4.8e-71 271.9 170 78.2
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 8.1e-71 271.2 297 52.5
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 8.1e-71 271.2 243 66.7
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 2.4e-67 259.6 210 64.3
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 4.2e-67 258.8 212 63.2
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 2.7e-66 256.1 184 66.8
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 2.7e-66 256.1 189 66.7
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 2.7e-66 256.1 163 75.5
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 1.0e-65 254.2 306 49.0
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 3.9e-65 252.3 145 81.4
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 8.7e-65 251.1 185 64.3
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 9.6e-64 247.7 150 77.3
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 4.8e-63 245.4 148 77.0
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 1.1e-62 244.2 200 64.5
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 5.3e-62 241.9 164 73.2
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 3.4e-61 239.2 252 64.7
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 4.5e-61 238.8 200 62.0
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 8.7e-57 224.6 190 64.2
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 8.7e-57 224.6 191 63.9
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 5.9e-53 211.8 281 47.0
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 7.6e-53 211.5 259 45.9
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 1.1e-51 207.6 131 75.6
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 1.4e-51 207.2 125 78.4
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 1.9e-51 206.8 190 54.2
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 5.1e-49 198.7 346 37.6
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 1.9e-48 196.8 154 64.3
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 9.1e-46 188.0 163 77.9
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 1.2e-42 177.6 115 75.7
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 1.5e-40 170.6 118 67.8
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 2.2e-39 166.8 114 67.5
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 3.4e-37 159.5 98 76.5
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 1.1e-30 137.9 145 52.4
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 7.7e-29 131.7 81 76.5
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 2.8e-23 113.2 107 57.9
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 1.9e-19 100.5 99 55.6
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 1.6e-18 97.4 112 50.0
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 7.5e-16 88.6 117 63.2
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 1.5e-08 64.3 39 76.9
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 4.4e-08 62.8 33 90.9
CDE02G1038 Ceratophyllum demersum HOM05D005011 ORTHO05D006443 3.7e-07 59.7 38 73.7
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 4.1e-06 56.2 29 86.2


User provided reference genes

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