Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 0.0e+00 1495.7 835 100.0
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 2.8e-59 234.6 567 36.3
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 1.3e-51 209.1 659 31.1
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 4.1e-50 204.1 674 31.5
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 7.0e-50 203.4 725 29.8
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 1.2e-49 202.6 644 31.2
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 8.5e-48 196.4 512 32.4
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 5.5e-47 193.7 580 31.9
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.6e-46 192.2 570 33.7
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 3.6e-46 191.0 657 31.4
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 3.6e-46 191.0 700 31.9
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 6.1e-46 190.3 619 31.5
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 3.0e-45 188.0 649 31.4
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 6.7e-45 186.8 577 31.7
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 8.8e-45 186.4 669 28.8
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 1.1e-44 186.0 663 30.2
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 2.0e-44 185.3 660 31.1
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 2.6e-44 184.9 587 31.7
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 3.3e-44 184.5 575 32.0
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 9.7e-44 183.0 687 30.9
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 1.3e-43 182.6 610 30.0
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 8.2e-43 179.9 871 27.9
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 8.2e-43 179.9 662 29.8
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 1.1e-42 179.5 804 29.0
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 1.4e-42 179.1 577 30.5
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.8e-42 178.7 620 30.0
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 2.4e-42 178.3 620 30.3
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 5.3e-42 177.2 486 30.0
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 9.1e-42 176.4 790 27.6
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.2e-41 176.0 580 30.3
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 1.6e-41 175.6 579 31.3
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.6e-41 175.6 668 29.2
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 2.0e-41 175.3 646 30.0
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 3.5e-41 174.5 582 30.1
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 4.5e-41 174.1 467 31.9
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 4.5e-41 174.1 577 30.7
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 4.5e-41 174.1 463 33.3
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 4.5e-41 174.1 477 30.8
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 7.7e-41 173.3 695 29.5
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 1.0e-40 172.9 466 31.8
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 1.0e-40 172.9 585 30.3
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 2.2e-40 171.8 587 30.8
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 2.9e-40 171.4 769 28.5
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.9e-40 171.4 675 28.6
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 6.5e-40 170.2 612 29.4
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 8.5e-40 169.9 615 29.3
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 1.1e-39 169.5 654 29.7
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 1.1e-39 169.5 579 29.7
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 1.5e-39 169.1 868 26.5
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 2.5e-39 168.3 280 40.0
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 3.2e-39 167.9 590 30.5
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 4.2e-39 167.5 574 29.6
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 5.5e-39 167.2 668 28.4
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 1.6e-38 165.6 616 28.4
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 2.1e-38 165.2 674 28.6
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 2.7e-38 164.9 591 29.9
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 2.7e-38 164.9 489 32.5
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 3.6e-38 164.5 602 29.2
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 6.1e-38 163.7 669 28.4
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 1.0e-37 162.9 601 29.6
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 1.0e-37 162.9 646 28.5
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.4e-37 162.5 691 28.1
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 1.4e-37 162.5 457 32.6
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 1.4e-37 162.5 595 29.2
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 2.3e-37 161.8 802 26.7
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 3.0e-37 161.4 611 29.3
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 6.8e-37 160.2 513 29.4
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 1.2e-36 159.5 438 30.1
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 2.6e-36 158.3 475 29.5
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 9.7e-36 156.4 474 33.8
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 1.3e-35 156.0 761 28.1
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.7e-35 155.6 677 28.1
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 2.2e-35 155.2 621 31.7
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 6.3e-35 153.7 510 30.4
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 8.3e-35 153.3 635 27.6
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 1.1e-34 152.9 599 31.7
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 2.4e-34 151.8 583 29.2
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 2.4e-34 151.8 553 29.8
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 2.4e-34 151.8 594 32.3
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 5.3e-34 150.6 624 29.0
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 1.2e-33 149.4 362 33.1
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 1.6e-33 149.1 466 28.8
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 3.5e-33 147.9 577 31.9
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 7.7e-33 146.7 503 30.0
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.7e-32 145.6 610 27.7
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 5.0e-32 144.1 637 27.6
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 1.9e-31 142.1 588 28.4
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 3.2e-31 141.4 636 28.0
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 1.6e-30 139.0 679 28.3
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 2.7e-30 138.3 477 28.5
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 3.6e-30 137.9 636 28.6
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 4.7e-30 137.5 587 27.6
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 1.0e-29 136.3 641 27.3
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 3.0e-29 134.8 613 27.1
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 5.2e-29 134.0 645 26.7
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 6.8e-29 133.7 614 27.5
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 6.8e-29 133.7 614 27.5
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 4.4e-28 131.0 618 27.0
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 8.3e-27 126.7 626 26.7
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.4e-26 125.9 522 28.5
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 2.5e-23 115.2 574 27.2
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 4.2e-23 114.4 631 28.4
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.0e-20 105.5 163 38.0
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 7.8e-17 93.6 305 29.2
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.5e-15 89.4 428 25.2
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.2e-12 79.7 153 43.1
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 4.4e-12 77.8 106 48.1
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 2.0e-09 68.9 362 24.3
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 1.7e-08 65.9 593 23.9
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.1e-07 63.2 212 29.7
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.1e-07 63.2 212 29.7
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.5e-07 62.8 396 27.0
Mapoly0003s0122 Marchantia polymorpha HOM05D020720 ORTHO05D007477 3.6e-06 58.2 115 38.3


User provided reference genes

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