Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 2.2e-122 442.2 210 100.0
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 9.6e-33 144.4 124 54.8
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 2.1e-32 143.3 150 51.3
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 4.8e-32 142.1 131 55.7
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 4.8e-32 142.1 97 67.0
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 6.2e-32 141.7 142 52.8
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 8.2e-32 141.4 140 52.1
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 2.4e-31 139.8 128 53.1
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 3.1e-31 139.4 140 51.4
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 6.9e-31 138.3 142 52.1
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 6.9e-31 138.3 147 49.0
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 6.9e-31 138.3 97 64.9
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 1.2e-30 137.5 140 50.7
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 2.0e-30 136.7 139 50.4
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 2.6e-30 136.3 136 50.0
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 2.6e-30 136.3 92 64.1
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 5.8e-30 135.2 98 62.2
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 5.8e-30 135.2 99 61.6
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 5.8e-30 135.2 136 51.5
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 7.6e-30 134.8 107 60.7
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.0e-29 134.4 118 51.7
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 2.9e-29 132.9 135 52.6
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 3.8e-29 132.5 153 46.4
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 5.0e-29 132.1 83 68.7
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 5.0e-29 132.1 99 61.6
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 6.5e-29 131.7 99 59.6
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 8.4e-29 131.3 91 63.7
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 8.4e-29 131.3 131 48.9
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 1.1e-28 131.0 141 47.5
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.4e-28 130.6 103 55.3
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 1.4e-28 130.6 90 62.2
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.4e-28 130.6 115 55.7
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 1.9e-28 130.2 98 59.2
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.9e-28 130.2 94 64.9
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.9e-28 130.2 92 65.2
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 2.5e-28 129.8 86 69.8
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 3.2e-28 129.4 83 68.7
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 3.2e-28 129.4 102 58.8
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 7.1e-28 128.3 134 51.5
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 7.1e-28 128.3 82 70.7
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 7.1e-28 128.3 79 65.8
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 9.3e-28 127.9 104 58.7
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 2.1e-27 126.7 80 67.5
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 2.1e-27 126.7 110 56.4
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 2.1e-27 126.7 120 53.3
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 3.5e-27 125.9 83 66.3
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 3.5e-27 125.9 97 58.8
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 3.5e-27 125.9 131 45.8
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 4.6e-27 125.6 83 66.3
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 6.1e-27 125.2 87 64.4
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 6.1e-27 125.2 127 49.6
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 6.1e-27 125.2 100 58.0
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 1.0e-26 124.4 100 60.0
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.0e-26 124.4 135 50.4
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 1.0e-26 124.4 73 74.0
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 1.3e-26 124.0 91 61.5
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 1.3e-26 124.0 99 57.6
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 1.8e-26 123.6 88 68.2
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 1.8e-26 123.6 118 50.8
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 1.8e-26 123.6 83 62.7
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 3.0e-26 122.9 99 57.6
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 5.1e-26 122.1 79 63.3
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 5.1e-26 122.1 83 62.7
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 5.1e-26 122.1 83 62.7
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 5.1e-26 122.1 83 62.7
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 5.1e-26 122.1 83 62.7
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 5.1e-26 122.1 83 62.7
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 6.7e-26 121.7 88 61.4
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 6.7e-26 121.7 88 61.4
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 8.7e-26 121.3 88 61.4
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 8.7e-26 121.3 83 62.7
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 8.7e-26 121.3 88 60.2
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 1.1e-25 120.9 83 62.7
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 1.9e-25 120.2 95 57.9
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 2.5e-25 119.8 88 60.2
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 4.3e-25 119.0 88 61.4
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 7.4e-25 118.2 83 62.7
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 7.4e-25 118.2 83 62.7
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 3.7e-24 115.9 101 54.5
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 4.8e-24 115.5 138 48.6
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 6.3e-24 115.2 120 51.7
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 6.3e-24 115.2 131 47.3
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 1.1e-23 114.4 88 56.8
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 1.1e-23 114.4 140 50.0
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 1.8e-23 113.6 81 65.4
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 2.4e-23 113.2 84 60.7
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 3.1e-23 112.8 133 48.9
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 5.3e-23 112.1 126 48.4
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 6.9e-23 111.7 102 51.0
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 1.3e-21 107.5 107 48.6
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 1.7e-21 107.1 76 61.8
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 1.7e-21 107.1 98 55.1
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 3.8e-21 105.9 96 50.0
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 5.0e-21 105.5 74 63.5
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 5.0e-21 105.5 87 55.2
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 5.5e-20 102.1 104 46.2
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 2.0e-17 93.6 77 51.9
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 2.5e-17 93.2 130 40.0
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 7.2e-12 75.1 115 41.7
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 1.2e-11 74.3 112 41.1
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 2.7e-11 73.2 48 60.4
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 2.6e-09 66.6 81 48.1
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 9.7e-09 64.7 82 40.2
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 3.7e-08 62.8 53 58.5
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 5.3e-07 58.9 86 40.7


User provided reference genes

Program Settings