Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0329G054 Amborella trichopoda HOM05D000443 ORTHO05D006935 1.7e-22 108.6 60 100.0
Lj9A408T89 Lonicera japonica HOM05D000443 ORTHO05D006935 1.2e-20 102.4 60 95.0
TAR628G1273 Trochodendron aralioides HOM05D000443 ORTHO05D006935 2.0e-20 101.7 59 94.9
Actinidia17989 Actinidia chinensis HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
Actinidia20580 Actinidia chinensis HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
ATR0329G065 Amborella trichopoda HOM05D000443 ORTHO05D006935 2.7e-20 101.3 60 95.0
CANSAT25G1435 Cannabis sativa HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
ClCG02G003280 Citrullus lanatus HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
MELO3C015698.2 Cucumis melo HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
CsaV3_7G002090 Cucumis sativus L. HOM05D000037 ORTHO05D000150 2.7e-20 101.3 59 94.9
Dinv41862 Davidia involucrata HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
Duzib132G0906 Durio zibethinus HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
HanXRQChr02g0047201 Helianthus annuus HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
Manes.03G097000 Manihot esculenta HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
Manes.15G113600 Manihot esculenta HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
Nn8g40373 Nelumbo nucifera HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
Nitab4.5_0000303g0260 Nicotiana tabacum HOM05D000443 ORTHO05D001066 2.7e-20 101.3 59 94.9
Peaxi162Scf00268g00613 Petunia axillaris HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
PGR142G2097 Punica granatum HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
Solyc06g065200.4 Solanum lycopersicum HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
Sopen06g023700 Solanum pennellii HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
PGSC0003DMG400026106 Solanum tuberosum HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
THA.LOC104807412 Tarenaya hassleriana HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
TWI79G0198 Tripterygium wilfordii HOM05D000443 ORTHO05D006935 2.7e-20 101.3 59 94.9
Aqoxy6G01540 Aquilegia oxysepala HOM05D000443 ORTHO05D006935 4.6e-20 100.5 59 94.9
ECA234G1622 Erigeron canadensis HOM05D000443 ORTHO05D006935 4.6e-20 100.5 59 93.2
MD05G1142800 Malus domestica HOM05D000443 ORTHO05D006935 4.6e-20 100.5 60 93.3
Potri.009G169200 Populus trichocarpa HOM05D000443 ORTHO05D006935 4.6e-20 100.5 59 93.2
Sed0001438 Sechium edule HOM05D000443 ORTHO05D006935 4.6e-20 100.5 59 94.9
Atru.chr5.3573 Acer truncatum HOM05D000443 ORTHO05D006935 6.0e-20 100.1 59 93.2
CiPaw.06G114400 Carya illinoinensis HOM05D000443 ORTHO05D006935 6.0e-20 100.1 59 93.2
Haze_01963 Corylus avellana HOM05D000037 ORTHO05D000150 6.0e-20 100.1 60 91.7
Sed0000770 Sechium edule HOM05D000443 ORTHO05D006935 6.0e-20 100.1 59 93.2
Hund00097 Selenicereus undatus HOM05D000443 ORTHO05D006935 6.0e-20 100.1 59 93.2
ATR0605G139 Amborella trichopoda HOM05D000443 ORTHO05D006935 7.8e-20 99.8 57 96.5
arahy.Tifrunner.gnm1.ann1.8Z4KFF Arachis hypogaea HOM05D000443 ORTHO05D006935 7.8e-20 99.8 58 94.8
arahy.Tifrunner.gnm1.ann1.KHE34K Arachis hypogaea HOM05D000443 ORTHO05D006935 7.8e-20 99.8 58 94.8
arahy.Tifrunner.gnm1.ann1.R1M58Z Arachis hypogaea HOM05D000443 ORTHO05D006935 7.8e-20 99.8 58 94.8
arahy.Tifrunner.gnm1.ann1.X2RL59 Arachis hypogaea HOM05D000443 ORTHO05D006935 7.8e-20 99.8 58 94.8
MSTRG.10170 Avicennia marina HOM05D000443 ORTHO05D006935 7.8e-20 99.8 58 94.8
CDE05G1952 Ceratophyllum demersum HOM05D000443 ORTHO05D006935 7.8e-20 99.8 58 94.8
Ciclev10029609m.g Citrus clementina HOM05D000443 ORTHO05D006935 7.8e-20 99.8 59 93.2
Duzib052G0133 Durio zibethinus HOM05D000443 ORTHO05D006935 7.8e-20 99.8 59 93.2
Migut.G00034 Erythranthe guttata HOM05D000443 ORTHO05D006935 7.8e-20 99.8 60 91.7
Migut.G00035 Erythranthe guttata HOM05D000443 ORTHO05D006935 7.8e-20 99.8 58 94.8
FAN15G1278 Fragaria x ananassa HOM05D000443 ORTHO05D006935 7.8e-20 99.8 59 93.2
FAN24G1683 Fragaria x ananassa HOM05D000443 ORTHO05D006935 7.8e-20 99.8 59 93.2
FAN27G0741 Fragaria x ananassa HOM05D000443 ORTHO05D006935 7.8e-20 99.8 59 93.2
MD10G1142700 Malus domestica HOM05D000443 ORTHO05D006935 7.8e-20 99.8 59 93.2
QL11p056627 Quercus lobata HOM05D000443 ORTHO05D006935 7.8e-20 99.8 60 91.7
RcHm_v2.0_Chr6g0281161 Rosa chinensis HOM05D000443 ORTHO05D006935 7.8e-20 99.8 59 93.2
Thecc.02G147500 Theobroma cacao HOM05D000443 ORTHO05D006935 7.8e-20 99.8 59 93.2
TWI31G1377 Tripterygium wilfordii HOM05D000443 ORTHO05D006935 7.8e-20 99.8 59 93.2
CAN.G308.68 Capsicum annuum HOM05D000443 ORTHO05D006935 1.0e-19 99.4 59 93.2
Prupe.8G181600 Prunus persica HOM05D000443 ORTHO05D006935 1.0e-19 99.4 59 93.2
Ca_14680_v3 Cicer arietinum L. HOM05D000443 ORTHO05D006935 1.3e-19 99.0 60 90.0
Lj4g0010337 Lotus japonicus HOM05D000443 ORTHO05D006935 1.3e-19 99.0 60 90.0
Medtr8g063460 Medicago truncatula HOM05D000443 ORTHO05D006935 1.3e-19 99.0 60 90.0
Os08g0511800 Oryza sativa ssp. japonica HOM05D000443 ORTHO05D006935 1.3e-19 99.0 58 93.1
CSS0021137 Camellia sinensis var. sinensis HOM05D000443 ORTHO05D006935 1.7e-19 98.6 58 93.1
CSS0037601 Camellia sinensis var. sinensis HOM05D000443 ORTHO05D006935 1.7e-19 98.6 58 93.1
Glyma.08G289600 Glycine max HOM05D000443 ORTHO05D006935 1.7e-19 98.6 60 90.0
Glyma.18G134900 Glycine max HOM05D000443 ORTHO05D006935 1.7e-19 98.6 60 90.0
Lsat_1_v5_gn_4_71260 Lactuca sativa HOM05D000443 ORTHO05D006935 1.7e-19 98.6 59 91.5
Phvul.003G053800 Phaseolus vulgaris HOM05D000443 ORTHO05D006935 1.7e-19 98.6 60 90.0
VMungo0720G1325 Vigna mungo HOM05D000443 ORTHO05D006935 1.7e-19 98.6 60 90.0
Zm00001eb316840 Zea mays HOM05D000443 ORTHO05D006935 1.7e-19 98.6 59 89.8
Cc11_g00630 Coffea canephora HOM05D000443 ORTHO05D006935 2.3e-19 98.2 58 93.1
COL.COLO4_03844 Corchorus olitorius HOM05D000443 ORTHO05D006935 2.3e-19 98.2 59 91.5
FvH4_2g16970 Fragaria vesca HOM05D000443 ORTHO05D006935 2.3e-19 98.2 58 93.1
PSO541G4498 Papaver somniferum HOM05D000443 ORTHO05D006935 2.3e-19 98.2 59 89.8
PSO675G5783 Papaver somniferum HOM05D000443 ORTHO05D006935 2.3e-19 98.2 59 89.8
MD05G1141900 Malus domestica HOM05D000443 ORTHO05D006935 3.9e-19 97.4 59 91.5
Os09g0491692 Oryza sativa ssp. japonica HOM05D000443 ORTHO05D006935 3.9e-19 97.4 59 88.1
Sc08g0002080 Simmondsia chinensis HOM05D000443 ORTHO05D006935 3.9e-19 97.4 58 91.4
Ah.01g010320 Amaranthus hybridus HOM05D000443 ORTHO05D006935 5.0e-19 97.1 58 91.4
EL10Ac9g21552 Beta vulgaris HOM05D000443 ORTHO05D006935 5.0e-19 97.1 58 91.4
AUR62010188 Chenopodium quinoa HOM05D000443 ORTHO05D006935 5.0e-19 97.1 58 91.4
AUR62013189 Chenopodium quinoa HOM05D000443 ORTHO05D006935 5.0e-19 97.1 58 91.4
DCAR_003345 Daucus carota HOM05D000443 ORTHO05D006935 5.0e-19 97.1 58 91.4
Lsat_1_v5_gn_8_120620 Lactuca sativa HOM05D000443 ORTHO05D006935 6.6e-19 96.7 60 90.0
Oeu029869.1 Olea europaea HOM05D000443 ORTHO05D006935 6.6e-19 96.7 57 93.0
Psat4g126920 Pisum sativum HOM05D000443 ORTHO05D006935 6.6e-19 96.7 60 86.7
HPP92_018958 Vanilla planifolia HOM05D000443 ORTHO05D006935 8.6e-19 96.3 59 89.8
Oeu022728.1 Olea europaea HOM05D000443 ORTHO05D006935 1.1e-18 95.9 58 91.4
THA.LOC104804305 Tarenaya hassleriana HOM05D000443 ORTHO05D006935 1.1e-18 95.9 60 86.7
THA.LOC104804551 Tarenaya hassleriana HOM05D000443 ORTHO05D006935 1.1e-18 95.9 60 86.7
A06p34070 Brassica napus HOM05D000443 ORTHO05D006935 1.5e-18 95.5 57 91.2
BraA06t26340Z Brassica rapa HOM05D000443 ORTHO05D006935 1.5e-18 95.5 57 91.2
CiPaw.05G094300 Carya illinoinensis HOM05D000443 ORTHO05D006935 1.5e-18 95.5 58 89.7
Sabra09G0131200 Salix brachista HOM05D000037 ORTHO05D004802 1.5e-18 95.5 57 91.2
HPP92_015754 Vanilla planifolia HOM05D000443 ORTHO05D006935 1.5e-18 95.5 57 91.2
Aa31LG8G14690 Aethionema arabicum HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
AL3G50230 Arabidopsis lyrata HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
AT2G17350 Arabidopsis thaliana HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
BcaB03g16486 Brassica carinata HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
BcaB08g34724 Brassica carinata HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
BcaC01g02933 Brassica carinata HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
BcaC06g36255 Brassica carinata HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
A07p03730 Brassica napus HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
C03p58190 Brassica napus HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
BolC3t18088H Brassica oleracea HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
BolC7t41006H Brassica oleracea HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
BraA07t28161Z Brassica rapa HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
Carub.0003s3138 Capsella rubella HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
CARHR107480 Cardamine hirsuta HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
Thhalv10022914m.g Eutrema salsugineum HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
Gohir.D02G193500 Gossypium hirsutum HOM05D000443 ORTHO05D006935 1.9e-18 95.1 60 88.3
Gorai.005G216300 Gossypium raimondii HOM05D000443 ORTHO05D006935 1.9e-18 95.1 60 88.3
Psat4g127000 Pisum sativum HOM05D000443 ORTHO05D006935 1.9e-18 95.1 60 86.7
Sp3g30670 Schrenkiella parvula HOM05D000443 ORTHO05D006935 1.9e-18 95.1 57 91.2
unitig_62.g23670 Utricularia gibba HOM05D000443 ORTHO05D006935 1.9e-18 95.1 58 89.7
arahy.Tifrunner.gnm1.ann1.5JP8BK Arachis hypogaea HOM05D000443 ORTHO05D006935 2.5e-18 94.7 59 88.1
SGA_v2.0_scaffold157G37346 Striga asiatica HOM05D000443 ORTHO05D006935 3.3e-18 94.4 57 89.5
vmacro20019 Vaccinium macrocarpon HOM05D000443 ORTHO05D006935 3.3e-18 94.4 56 91.1
Gohir.A03G170400 Gossypium hirsutum HOM05D000443 ORTHO05D006935 4.3e-18 94.0 60 86.7
Lalb_Chr05g0227911 Lupinus albus HOM05D000443 ORTHO05D006935 4.3e-18 94.0 56 91.1
Hma1.2p1_0271F.1_g108700 Hydrangea macrophylla HOM05D000443 ORTHO05D006935 9.5e-18 92.8 56 89.3
SalBow8G0190 Salvia bowleyana HOM05D000443 ORTHO05D006935 1.6e-17 92.0 60 85.0
Ca_13829_v3 Cicer arietinum L. HOM05D000443 ORTHO05D006935 2.1e-17 91.7 60 85.0
Pp3c6_23720 Physcomitrium patens HOM05D000443 ORTHO05D006935 4.7e-17 90.5 60 81.7
TPR.G26885 Trifolium pratense HOM05D000443 ORTHO05D006935 2.9e-14 81.3 60 80.0
Pp3c16_14160 Physcomitrium patens HOM05D000443 ORTHO05D006935 3.2e-13 77.8 54 75.9
Ah.01g017680 Amaranthus hybridus HOM05D000443 ORTHO05D006935 5.4e-13 77.0 47 89.4
AagrBONN_evm.TU.Sc2ySwM_362.658 Anthoceros agrestis HOM05D000443 ORTHO05D006935 3.5e-12 74.3 50 78.0
AagrBONN_evm.TU.Sc2ySwM_369.59 Anthoceros agrestis HOM05D000443 ORTHO05D006935 3.5e-12 74.3 50 78.0
Zm00001eb288990 Zea mays HOM05D000443 ORTHO05D006935 5.1e-11 70.5 44 86.4
CBR_g20399 Chara braunii HOM05D000443 ORTHO05D006935 8.6e-11 69.7 47 76.6
Phvul.010G144400 Phaseolus vulgaris HOM05D000443 ORTHO05D006935 8.6e-11 69.7 47 80.9
ClCG02G010820 Citrullus lanatus HOM05D000443 ORTHO05D006935 1.4e-08 62.4 60 60.0
SMO358G0470 Selaginella moellendorffii HOM05D000443 ORTHO05D006935 1.8e-08 62.0 40 77.5
GSVIVG01011124001 Vitis vinifera HOM05D000443 ORTHO05D006935 1.3e-06 55.8 31 96.8


User provided reference genes

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