Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 4.1e-69 264.6 136 100.0
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 3.4e-47 191.8 125 76.0
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 6.4e-46 187.6 125 70.4
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 6.4e-46 187.6 125 70.4
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.1e-45 186.8 113 75.2
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 4.2e-45 184.9 127 67.7
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 4.2e-45 184.9 121 71.1
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.2e-44 183.3 125 68.8
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.2e-44 183.3 112 76.8
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 2.1e-44 182.6 127 66.9
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 3.5e-44 181.8 124 74.2
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 4.6e-44 181.4 127 66.9
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.8e-43 179.5 119 72.3
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 1.8e-43 179.5 113 73.5
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 2.3e-43 179.1 122 70.5
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 5.1e-43 177.9 114 71.9
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 5.1e-43 177.9 113 75.2
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.5e-42 176.4 110 73.6
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 1.5e-42 176.4 108 76.9
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 1.9e-42 176.0 110 73.6
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 1.9e-42 176.0 131 64.9
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 5.6e-42 174.5 132 65.9
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.3e-41 173.3 119 67.2
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 3.7e-41 171.8 109 71.6
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 3.7e-41 171.8 135 63.0
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 4.8e-41 171.4 104 74.0
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.4e-40 169.9 114 71.1
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 1.4e-40 169.9 108 72.2
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 1.8e-40 169.5 111 72.1
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.8e-40 169.5 114 71.1
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 3.1e-40 168.7 124 66.9
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 1.2e-39 166.8 112 70.5
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 2.0e-39 166.0 132 63.6
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 2.6e-39 165.6 124 62.1
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 4.5e-39 164.9 112 69.6
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 5.8e-39 164.5 124 62.1
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 5.8e-39 164.5 130 62.3
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 5.8e-39 164.5 103 69.9
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 9.9e-39 163.7 123 64.2
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 9.9e-39 163.7 118 66.9
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 1.7e-38 162.9 105 70.5
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 2.2e-38 162.5 124 61.3
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 2.2e-38 162.5 112 67.0
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 2.2e-38 162.5 106 71.7
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.2e-38 162.5 105 73.3
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 3.8e-38 161.8 109 67.9
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 3.8e-38 161.8 115 65.2
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 4.9e-38 161.4 110 65.5
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 6.4e-38 161.0 127 61.4
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 6.4e-38 161.0 105 69.5
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 1.1e-37 160.2 109 67.0
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 1.4e-37 159.8 108 68.5
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 1.9e-37 159.5 127 61.4
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 1.9e-37 159.5 109 66.1
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 2.4e-37 159.1 107 68.2
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.2e-37 158.7 105 68.6
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.2e-37 158.7 105 68.6
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 3.2e-37 158.7 100 74.0
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 3.2e-37 158.7 131 61.1
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 4.2e-37 158.3 127 61.4
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 4.2e-37 158.3 117 61.5
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 4.2e-37 158.3 100 73.0
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 4.2e-37 158.3 131 61.1
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 5.5e-37 157.9 111 64.9
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 7.1e-37 157.5 132 59.8
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 7.1e-37 157.5 106 67.0
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 9.3e-37 157.1 100 72.0
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 1.2e-36 156.8 110 67.3
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 1.6e-36 156.4 111 67.6
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 1.6e-36 156.4 104 70.2
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 2.1e-36 156.0 100 71.0
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 2.7e-36 155.6 115 67.0
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 2.7e-36 155.6 115 67.0
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 2.7e-36 155.6 115 67.0
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 2.7e-36 155.6 115 67.0
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 2.7e-36 155.6 111 66.7
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 2.7e-36 155.6 127 57.5
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 4.6e-36 154.8 111 66.7
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 6.0e-36 154.5 112 63.4
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 6.0e-36 154.5 120 65.8
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 7.9e-36 154.1 126 61.9
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 7.9e-36 154.1 131 58.8
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.0e-35 153.7 129 58.9
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 1.0e-35 153.7 112 63.4
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 1.3e-35 153.3 114 63.2
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 1.8e-35 152.9 124 62.1
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 3.0e-35 152.1 131 58.0
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 5.1e-35 151.4 137 56.9
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 5.1e-35 151.4 117 59.0
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 6.7e-35 151.0 104 70.2
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 8.7e-35 150.6 105 66.7
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 8.7e-35 150.6 107 63.6
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 2.1e-33 146.0 133 55.6
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 6.2e-33 144.4 97 67.0
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.1e-32 143.7 109 65.1
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 1.4e-32 143.3 102 62.7
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 1.4e-32 143.3 193 45.1
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 2.4e-32 142.5 106 62.3
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 3.1e-32 142.1 144 52.8
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 9.0e-32 140.6 132 55.3
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 1.5e-31 139.8 161 48.4
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.0e-27 127.1 87 66.7
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 1.3e-27 126.7 106 58.5
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.5e-26 123.2 104 58.7
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 4.3e-26 121.7 104 58.7
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 9.7e-26 120.6 84 66.7
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 6.3e-25 117.9 103 57.3
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 4.1e-24 115.2 114 55.3
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.5e-23 113.2 85 65.9
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 1.7e-22 109.8 103 52.4
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 8.5e-22 107.5 75 65.3
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.4e-21 106.7 65 76.9
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 8.8e-19 97.4 71 62.0
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 1.9e-18 96.3 104 44.2
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 4.3e-18 95.1 90 48.9
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 7.4e-18 94.4 64 68.8
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.3e-17 93.6 66 65.2
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 6.3e-17 91.3 53 73.6
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 1.8e-16 89.7 103 43.7
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.5e-15 86.7 90 43.3
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 2.0e-15 86.3 93 47.3
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 3.6e-12 75.5 66 54.5
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 8.8e-11 70.9 88 45.5
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 8.8e-11 70.9 57 61.4
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 8.8e-11 70.9 40 75.0
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 6.5e-06 54.7 77 41.6


User provided reference genes

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