Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0329G009 Amborella trichopoda HOM05D010001 ORTHO05D011145 1.0e-72 276.6 135 100.0
ATR0624G130 Amborella trichopoda HOM05D000017 ORTHO05D011145 5.4e-29 131.3 226 39.4
ATR0733G141 Amborella trichopoda HOM05D000017 ORTHO05D000013 4.3e-18 95.1 53 81.1
ATR1155G048 Amborella trichopoda HOM05D000017 ORTHO05D011145 6.2e-17 91.3 151 40.4
ATR0681G327 Amborella trichopoda HOM05D000017 ORTHO05D011145 4.0e-16 88.6 128 39.8
ATR0208G020 Amborella trichopoda HOM05D010001 ORTHO05D011145 5.3e-16 88.2 54 77.8
ATR0208G032 Amborella trichopoda HOM05D010001 ORTHO05D011145 1.7e-14 83.2 117 43.6
ATR0568G073 Amborella trichopoda HOM05D000017 ORTHO05D011145 3.2e-13 79.0 54 68.5
ATR0767G150 Amborella trichopoda HOM05D000017 ORTHO05D011145 1.2e-12 77.0 55 65.5
ATR1136G033 Amborella trichopoda HOM05D000017 ORTHO05D011145 3.5e-12 75.5 103 44.7
ATR0787G126 Amborella trichopoda HOM05D000017 ORTHO05D011145 7.9e-12 74.3 53 69.8
ATR0332G101 Amborella trichopoda HOM05D010001 ORTHO05D011145 1.3e-11 73.6 124 40.3
ATR0589G126 Amborella trichopoda HOM05D000017 ORTHO05D011145 5.1e-11 71.6 54 64.8
Dinv22726 Davidia involucrata HOM05D000017 ORTHO05D000013 1.1e-10 70.5 145 29.7
ATR0609G071 Amborella trichopoda HOM05D000017 ORTHO05D000013 1.5e-10 70.1 65 52.3
ATR0827G169 Amborella trichopoda HOM05D000017 ORTHO05D000013 9.6e-10 67.4 65 52.3
ATR0213G007 Amborella trichopoda HOM05D000017 ORTHO05D000013 2.1e-09 66.2 65 47.7
CDE04G0238 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 2.1e-09 66.2 78 35.9
CDE02G3799 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 6.2e-09 64.7 64 42.2
ATR0315G004 Amborella trichopoda HOM05D010001 ORTHO05D011145 8.2e-09 64.3 43 69.8
AUR62006812 Chenopodium quinoa HOM05D000017 ORTHO05D000013 8.2e-09 64.3 61 44.3
ATR0568G129 Amborella trichopoda HOM05D000017 ORTHO05D000013 1.4e-08 63.5 65 50.8
ATR0629G096 Amborella trichopoda HOM05D010001 ORTHO05D011145 1.4e-08 63.5 113 38.9
Ah.10g026870 Amaranthus hybridus HOM05D000017 ORTHO05D000013 2.4e-08 62.8 61 44.3
Aqoxy5G02808 Aquilegia oxysepala HOM05D000017 ORTHO05D000013 3.1e-08 62.4 64 43.8
CSS0016415 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.0e-08 62.0 150 28.0
EL10Ac4g09552 Beta vulgaris HOM05D000017 ORTHO05D000013 5.3e-08 61.6 61 41.0
AUR62000470 Chenopodium quinoa HOM05D000017 ORTHO05D000013 5.3e-08 61.6 61 41.0
CSS0016550 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.9e-08 61.2 153 28.8
Gorai.007G309200 Gossypium raimondii HOM05D000017 ORTHO05D000013 6.9e-08 61.2 61 41.0
CDE08G1440 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 9.0e-08 60.8 62 40.3
Sabra14G0083900 Salix brachista HOM05D000017 ORTHO05D000013 9.0e-08 60.8 61 44.3
Gorai.004G108400 Gossypium raimondii HOM05D000017 ORTHO05D000013 1.2e-07 60.5 62 41.9
Oeu000101.1 Olea europaea HOM05D000017 ORTHO05D000013 1.2e-07 60.5 61 41.0
ATR1159G001 Amborella trichopoda HOM05D000017 ORTHO05D011145 1.5e-07 60.1 58 44.8
Lj5C319T3 Lonicera japonica HOM05D000017 ORTHO05D000013 1.5e-07 60.1 62 40.3
Nn1g05059 Nelumbo nucifera HOM05D000017 ORTHO05D000013 1.5e-07 60.1 65 41.5
Nn3g21926 Nelumbo nucifera HOM05D000017 ORTHO05D000013 1.5e-07 60.1 61 41.0
Sabra02G0130100 Salix brachista HOM05D000017 ORTHO05D000013 1.5e-07 60.1 61 39.3
CsaV3_6G014630 Cucumis sativus L. HOM05D000017 ORTHO05D000013 2.0e-07 59.7 62 38.7
Dinv24511 Davidia involucrata HOM05D000017 ORTHO05D000013 2.0e-07 59.7 64 37.5
Duzib168G0823 Durio zibethinus HOM05D000017 ORTHO05D000013 2.0e-07 59.7 62 43.5
Duzib187G1213 Durio zibethinus HOM05D000017 ORTHO05D000013 2.0e-07 59.7 62 40.3
QL02p090368 Quercus lobata HOM05D000017 ORTHO05D000013 2.0e-07 59.7 62 41.9
ATR0602G146 Amborella trichopoda HOM05D010001 ORTHO05D011145 2.6e-07 59.3 43 67.4
Sed0002502 Sechium edule HOM05D000017 ORTHO05D000013 2.6e-07 59.3 62 40.3
CDE10G0466 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 3.4e-07 58.9 62 41.9
Actinidia02538 Actinidia chinensis HOM05D000017 ORTHO05D000013 4.5e-07 58.5 61 41.0
CSS0015918 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.5e-07 58.5 149 28.2
FvH4_6g08441 Fragaria vesca HOM05D000017 ORTHO05D000013 4.5e-07 58.5 64 40.6
Lj7C584T2 Lonicera japonica HOM05D000017 ORTHO05D000013 4.5e-07 58.5 63 38.1
MD15G1396600 Malus domestica HOM05D000017 ORTHO05D000013 4.5e-07 58.5 65 43.1
Nn1g08727 Nelumbo nucifera HOM05D000017 ORTHO05D000013 4.5e-07 58.5 65 38.5
Os12g0597300 Oryza sativa ssp. japonica HOM05D000017 ORTHO05D000013 4.5e-07 58.5 64 42.2
RcHm_v2.0_Chr3g0458421 Rosa chinensis HOM05D000017 ORTHO05D000013 4.5e-07 58.5 64 40.6
TWI56G0503 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.5e-07 58.5 62 40.3
Ca_18426_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 5.8e-07 58.2 63 44.4
Migut.N00972 Erythranthe guttata HOM05D000017 ORTHO05D000013 5.8e-07 58.2 61 39.3
PSO170G0655 Papaver somniferum HOM05D000017 ORTHO05D000013 5.8e-07 58.2 62 40.3
PSO210G3669 Papaver somniferum HOM05D000017 ORTHO05D000013 5.8e-07 58.2 61 37.7
MSTRG.20357 Avicennia marina HOM05D000017 ORTHO05D000013 7.6e-07 57.8 64 34.4
Dinv29502 Davidia involucrata HOM05D000017 ORTHO05D000013 7.6e-07 57.8 75 37.3
Duzib177G0093 Durio zibethinus HOM05D000017 ORTHO05D000013 7.6e-07 57.8 61 39.3
Hma1.2p1_2234F.1_g317670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.6e-07 57.8 64 34.4
Hma1.2p1_3713F.1_g337360 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.6e-07 57.8 64 34.4
Nn2g12160 Nelumbo nucifera HOM05D000017 ORTHO05D000013 7.6e-07 57.8 62 38.7
Psat7g263680 Pisum sativum HOM05D000017 ORTHO05D000013 7.6e-07 57.8 61 45.9
Dinv18659 Davidia involucrata HOM05D000017 ORTHO05D000013 1.0e-06 57.4 60 41.7
Dinv30946 Davidia involucrata HOM05D000017 ORTHO05D000013 1.0e-06 57.4 61 39.3
Gorai.005G072800 Gossypium raimondii HOM05D000017 ORTHO05D000013 1.0e-06 57.4 61 37.7
PSO761G0609 Papaver somniferum HOM05D000017 ORTHO05D000013 1.0e-06 57.4 129 25.6
Prupe.8G156200 Prunus persica HOM05D000017 ORTHO05D000013 1.0e-06 57.4 65 43.1
PGR083G0960 Punica granatum HOM05D000017 ORTHO05D000013 1.0e-06 57.4 61 41.0
TAR381G0389 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.0e-06 57.4 61 49.2
CSS0045571 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.3e-06 57.0 61 37.7
Lj4g0022781 Lotus japonicus HOM05D000017 ORTHO05D000013 1.3e-06 57.0 61 45.9
Nn5g30689 Nelumbo nucifera HOM05D000017 ORTHO05D000013 1.3e-06 57.0 61 49.2
Rhsim02G0000300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.3e-06 57.0 61 37.7
Ca_21375_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.7e-06 56.6 61 32.8
Ciclev10004400m.g Citrus clementina HOM05D000017 ORTHO05D000013 1.7e-06 56.6 61 36.1
Duzib212G0997 Durio zibethinus HOM05D000017 ORTHO05D000013 1.7e-06 56.6 61 34.4
Hma1.2p1_0223F.1_g094250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-06 56.6 65 44.6
Hma1.2p1_0361F.1_g135970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-06 56.6 65 44.6
MD04G1186800 Malus domestica HOM05D000017 ORTHO05D000013 1.7e-06 56.6 64 37.5
Prupe.6G305400 Prunus persica HOM05D000017 ORTHO05D000013 1.7e-06 56.6 64 37.5
TAR362G0164 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.7e-06 56.6 61 36.1
VMungo0720G0123 Vigna mungo HOM05D000017 ORTHO05D000013 1.7e-06 56.6 64 37.5
Aqoxy4G00683 Aquilegia oxysepala HOM05D000447 ORTHO05D000013 2.2e-06 56.2 75 36.0
Gorai.006G266700 Gossypium raimondii HOM05D000017 ORTHO05D000013 2.2e-06 56.2 61 37.7
HanXRQChr09g0250771 Helianthus annuus HOM05D000017 ORTHO05D000013 2.2e-06 56.2 61 37.7
PSO357G0484 Papaver somniferum HOM05D000017 ORTHO05D000013 2.2e-06 56.2 62 38.7
QL06p014321 Quercus lobata HOM05D000017 ORTHO05D000013 2.2e-06 56.2 61 34.4
Actinidia11687 Actinidia chinensis HOM05D000017 ORTHO05D000013 2.9e-06 55.8 61 37.7
COL.COLO4_34513 Corchorus olitorius HOM05D000017 ORTHO05D000013 2.9e-06 55.8 61 34.4
Duzib052G1077 Durio zibethinus HOM05D000017 ORTHO05D000013 2.9e-06 55.8 61 47.5
Duzib151G0341 Durio zibethinus HOM05D000017 ORTHO05D000013 2.9e-06 55.8 61 37.7
ECA240G4090 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.9e-06 55.8 61 37.7
Hma1.2p1_0175F.1_g077075 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.9e-06 55.8 156 25.6
Hma1.2p1_1218F.1_g267670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.9e-06 55.8 156 25.6
QL03p010949 Quercus lobata HOM05D000017 ORTHO05D000013 2.9e-06 55.8 61 41.0
TPR.G2641 Trifolium pratense HOM05D000017 ORTHO05D000013 2.9e-06 55.8 64 37.5
ATR0716G109 Amborella trichopoda HOM05D010001 ORTHO05D011145 3.8e-06 55.5 109 37.6
Ca_10198_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 3.8e-06 55.5 64 39.1
Hma1.2p1_0309F.1_g120570 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.8e-06 55.5 66 39.4
Hma1.2p1_1572F.1_g291350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.8e-06 55.5 66 39.4
Lj4g0022087 Lotus japonicus HOM05D000017 ORTHO05D000013 3.8e-06 55.5 61 34.4
Rhsim04G0248800 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.8e-06 55.5 61 34.4
Rhsim04G0249800 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.8e-06 55.5 61 34.4
TAR626G1751 Trochodendron aralioides HOM05D000017 ORTHO05D000013 3.8e-06 55.5 62 35.5
Atru.chr4.3164 Acer truncatum HOM05D000017 ORTHO05D000013 4.9e-06 55.1 61 34.4
Ah.06g192040 Amaranthus hybridus HOM05D000017 ORTHO05D000013 4.9e-06 55.1 62 40.3
ATR0665G260 Amborella trichopoda HOM05D000017 ORTHO05D000013 4.9e-06 55.1 64 37.5
CSS0014089 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.9e-06 55.1 149 28.9
CSS0037974 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.9e-06 55.1 90 31.1
CANSAT11G1094 Cannabis sativa HOM05D000017 ORTHO05D000013 4.9e-06 55.1 62 33.9
Dinv29503 Davidia involucrata HOM05D000017 ORTHO05D000013 4.9e-06 55.1 61 34.4
ECA246G4439 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.9e-06 55.1 61 36.1
FAN16G0950 Fragaria x ananassa HOM05D000017 ORTHO05D000013 4.9e-06 55.1 142 25.4
Hma1.2p1_2873F.1_g329720 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.9e-06 55.1 65 43.1
MD12G1200300 Malus domestica HOM05D000017 ORTHO05D000013 4.9e-06 55.1 64 37.5
Nn6g34542 Nelumbo nucifera HOM05D000017 ORTHO05D000013 4.9e-06 55.1 61 45.9
Psat4g021080 Pisum sativum HOM05D000017 ORTHO05D000013 4.9e-06 55.1 61 32.8
Rhsim04G0158300 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.9e-06 55.1 122 26.2
TWI59G0426 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.9e-06 55.1 61 44.3
MSTRG.27912 Avicennia marina HOM05D000017 ORTHO05D000013 6.5e-06 54.7 60 36.7
CAN.G1248.18 Capsicum annuum HOM05D000017 ORTHO05D000013 6.5e-06 54.7 61 36.1
Ciclev10011129m.g Citrus clementina HOM05D000017 ORTHO05D000013 6.5e-06 54.7 61 39.3
Ciclev10028083m.g Citrus clementina HOM05D000017 ORTHO05D000013 6.5e-06 54.7 61 44.3
ECA248G0634 Erigeron canadensis HOM05D000017 ORTHO05D000013 6.5e-06 54.7 61 36.1
FvH4_2g02692 Fragaria vesca HOM05D000017 ORTHO05D000013 6.5e-06 54.7 61 44.3
Lsat_1_v5_gn_1_115801 Lactuca sativa HOM05D000017 ORTHO05D000013 6.5e-06 54.7 61 36.1
Lalb_Chr21g0310071 Lupinus albus HOM05D000017 ORTHO05D000013 6.5e-06 54.7 64 37.5
Nn4g25370 Nelumbo nucifera HOM05D000017 ORTHO05D000013 6.5e-06 54.7 61 34.4
QL11p027748 Quercus lobata HOM05D000017 ORTHO05D000013 6.5e-06 54.7 64 42.2
Sabra08G0153300 Salix brachista HOM05D000017 ORTHO05D000013 6.5e-06 54.7 61 34.4
TWI09G1474 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.5e-06 54.7 61 34.4
Actinidia18511 Actinidia chinensis HOM05D000017 ORTHO05D000013 8.4e-06 54.3 61 34.4
CANSAT11G0373 Cannabis sativa HOM05D000017 ORTHO05D000013 8.4e-06 54.3 65 40.0
HanXRQChr05g0149001 Helianthus annuus HOM05D000017 ORTHO05D000013 8.4e-06 54.3 61 36.1
Psat3g016000 Pisum sativum HOM05D000017 ORTHO05D000013 8.4e-06 54.3 61 32.8


User provided reference genes

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