Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0326G061 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.4e-56 222.6 108 100.0
Cc01_g06590 Coffea canephora HOM05D000665 ORTHO05D000140 1.2e-10 70.1 103 33.0
Dinv29316 Davidia involucrata HOM05D000001 ORTHO05D000003 4.5e-10 68.2 114 33.3
Ca_02662_v3 Cicer arietinum L. HOM05D000665 ORTHO05D000140 1.7e-09 66.2 114 32.5
Lj4C833G3 Lonicera japonica HOM05D000665 ORTHO05D000140 1.7e-09 66.2 104 33.7
TPR.G11842 Trifolium pratense HOM05D000001 ORTHO05D000003 2.2e-09 65.9 114 31.6
MBI12_g00584_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.9e-09 65.5 98 37.8
QL01p016365 Quercus lobata HOM05D000665 ORTHO05D000140 3.8e-09 65.1 91 37.4
MBI11_g39863_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 5.0e-09 64.7 100 37.0
Sed0003980 Sechium edule HOM05D000665 ORTHO05D000140 8.5e-09 63.9 100 31.0
TAR636G0533 Trochodendron aralioides HOM05D000665 ORTHO05D000140 1.9e-08 62.8 112 30.4
MBI06_g13407_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 3.2e-08 62.0 101 32.7
Haze_23288 Corylus avellana HOM05D000665 ORTHO05D000140 4.2e-08 61.6 99 30.3
MBI16_g18429_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 7.2e-08 60.8 100 32.0
MBI19_g41922_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 7.2e-08 60.8 100 32.0
Aqoxy4G01122 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 9.4e-08 60.5 98 30.6
Aqoxy7G02014 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 9.4e-08 60.5 104 30.8
MBI12_g20255_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 9.4e-08 60.5 97 40.2
MBI13_g01108_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 1.2e-07 60.1 98 37.8
COL.COLO4_06628 Corchorus olitorius HOM05D000665 ORTHO05D000140 1.6e-07 59.7 94 37.2
Gohir.D05G075500 Gossypium hirsutum HOM05D000665 ORTHO05D000140 1.6e-07 59.7 89 34.8
Lalb_Chr15g0080181 Lupinus albus HOM05D000665 ORTHO05D000140 1.6e-07 59.7 92 34.8
QL01p016350 Quercus lobata HOM05D000665 ORTHO05D000140 1.6e-07 59.7 91 36.3
MBI03_g16308_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.7e-07 58.9 101 32.7
MBI04_g13684_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.7e-07 58.9 98 34.7
MBI14_g11626_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 3.6e-07 58.5 96 34.4
ClCG03G012420 Citrullus lanatus HOM05D000665 ORTHO05D000140 4.7e-07 58.2 90 33.3
Duzib168G0826 Durio zibethinus HOM05D000665 ORTHO05D000140 4.7e-07 58.2 84 38.1
MBI06_g29245_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 4.7e-07 58.2 98 33.7
Aqoxy7G01815 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 6.1e-07 57.8 94 35.1
Haze_23291 Corylus avellana HOM05D000665 ORTHO05D000140 6.1e-07 57.8 99 28.3
RcHm_v2.0_Chr6g0302651 Rosa chinensis HOM05D000665 ORTHO05D000140 6.1e-07 57.8 93 32.3
Dinv04945 Davidia involucrata HOM05D000665 ORTHO05D000140 8.0e-07 57.4 88 37.5
MBI14_g31651_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 8.0e-07 57.4 96 34.4
PSO782G1930 Papaver somniferum HOM05D000665 ORTHO05D000140 8.0e-07 57.4 104 34.6
Thecc.09G253400 Theobroma cacao HOM05D000665 ORTHO05D000140 8.0e-07 57.4 84 36.9
Cc07_g11040 Coffea canephora HOM05D000665 ORTHO05D003147 1.0e-06 57.0 98 31.6
FvH4_2g38660 Fragaria vesca HOM05D000665 ORTHO05D000140 1.0e-06 57.0 103 31.1
vmacro22150 Vaccinium macrocarpon HOM05D000665 ORTHO05D003147 1.0e-06 57.0 102 28.4
ATR0559G225 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.4e-06 56.6 109 31.2
AT2G24960 Arabidopsis thaliana HOM05D000665 ORTHO05D000140 1.4e-06 56.6 101 31.7
MBI08_g17872_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 1.4e-06 56.6 96 33.3
PSO782G0672 Papaver somniferum HOM05D000665 ORTHO05D000140 1.4e-06 56.6 104 33.7
MBI14_g26928_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 1.8e-06 56.2 100 34.0
MBI15_g04206_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 1.8e-06 56.2 98 33.7
Phvul.006G016600 Phaseolus vulgaris HOM05D000665 ORTHO05D000140 1.8e-06 56.2 90 34.4
THA.LOC104820967 Tarenaya hassleriana HOM05D000665 ORTHO05D000140 1.8e-06 56.2 89 34.8
Glyma.07G234900 Glycine max HOM05D000665 ORTHO05D000140 2.3e-06 55.8 95 32.6
MBI01_g12902_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.3e-06 55.8 98 31.6
Medtr3g045460 Medicago truncatula HOM05D000665 ORTHO05D000140 2.3e-06 55.8 91 33.0
vmacro11267 Vaccinium macrocarpon HOM05D000665 ORTHO05D000140 2.3e-06 55.8 109 23.9
FAN27G2099 Fragaria x ananassa HOM05D000665 ORTHO05D000140 3.0e-06 55.5 99 28.3
MBI14_g32135_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 3.0e-06 55.5 96 36.5
MBI18_g11288_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 3.0e-06 55.5 106 26.4
Nn1g01996 Nelumbo nucifera HOM05D000665 ORTHO05D000140 3.0e-06 55.5 99 30.3
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 3.0e-06 55.5 102 28.4
TAR526G0001 Trochodendron aralioides HOM05D000665 ORTHO05D000140 3.0e-06 55.5 95 29.5
Duzib177G0054 Durio zibethinus HOM05D000665 ORTHO05D000140 4.0e-06 55.1 98 29.6
FAN15G1296 Fragaria x ananassa HOM05D000665 ORTHO05D003147 4.0e-06 55.1 99 28.3
Gorai.009G076900 Gossypium raimondii HOM05D000665 ORTHO05D000140 4.0e-06 55.1 94 31.9
MBI03_g06065_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 4.0e-06 55.1 98 32.7
MBI04_g21745_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 4.0e-06 55.1 106 26.4
MBI04_g34131_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 4.0e-06 55.1 97 29.9
MBI08_g15723_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 4.0e-06 55.1 86 32.6
Psat2g130400 Pisum sativum HOM05D000665 ORTHO05D000140 4.0e-06 55.1 91 33.0
Thecc.05G306300 Theobroma cacao HOM05D000665 ORTHO05D000140 4.0e-06 55.1 112 30.4
Aqoxy1G00439 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 5.2e-06 54.7 100 26.0
CiPaw.04G117800 Carya illinoinensis HOM05D000876 ORTHO05D000285 5.2e-06 54.7 92 33.7
Hma1.2p1_0979F.1_g243550 Hydrangea macrophylla HOM05D000665 ORTHO05D000140 5.2e-06 54.7 96 30.2
MBI06_g16053_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 5.2e-06 54.7 95 33.7
MBI07_g45035_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 5.2e-06 54.7 96 33.3
MBI15_g03056_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 5.2e-06 54.7 108 26.9
Sopen02g015990 Solanum pennellii HOM05D003487 ORTHO05D000140 5.2e-06 54.7 82 31.7
Sopen09g020440 Solanum pennellii HOM05D003487 ORTHO05D000140 5.2e-06 54.7 82 31.7
VMungo0540G2239 Vigna mungo HOM05D000665 ORTHO05D000140 5.2e-06 54.7 92 30.4
Aqoxy3G01281 Aquilegia oxysepala HOM05D025411 ORTHO05D000140 6.7e-06 54.3 93 34.4
MBI11_g40142_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 6.7e-06 54.3 108 26.9
MBI14_g25462_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 6.7e-06 54.3 108 26.9
Sopen02g012900 Solanum pennellii HOM05D000665 ORTHO05D003147 6.7e-06 54.3 92 30.4
Actinidia36755 Actinidia chinensis HOM05D000665 ORTHO05D003147 8.8e-06 53.9 92 26.1
MBI01_g44372_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 8.8e-06 53.9 97 26.8
MBI06_g21010_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 8.8e-06 53.9 96 34.4
MD15G1042400 Malus domestica HOM05D000665 ORTHO05D000140 8.8e-06 53.9 97 32.0
Oeu021910.1 Olea europaea HOM05D000665 ORTHO05D000140 8.8e-06 53.9 99 30.3
PSO675G3606 Papaver somniferum HOM05D000665 ORTHO05D003147 8.8e-06 53.9 93 30.1


User provided reference genes

Program Settings