Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 6.9e-47 190.3 94 100.0
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 4.6e-27 124.4 86 69.8
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 1.3e-26 122.9 96 65.6
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 1.8e-26 122.5 96 65.6
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 2.3e-26 122.1 95 66.3
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 3.0e-26 121.7 97 64.9
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 3.9e-26 121.3 90 64.4
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 6.7e-26 120.6 94 64.9
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 8.7e-26 120.2 94 63.8
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 8.7e-26 120.2 95 66.3
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 8.7e-26 120.2 95 64.2
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 1.1e-25 119.8 85 68.2
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 1.5e-25 119.4 85 67.1
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.5e-25 119.4 85 67.1
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.5e-25 119.4 85 67.1
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.5e-25 119.4 85 67.1
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 1.5e-25 119.4 86 67.4
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.5e-25 119.4 91 63.7
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 1.9e-25 119.0 96 64.6
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 1.9e-25 119.0 94 62.8
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 2.5e-25 118.6 91 62.6
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 2.5e-25 118.6 91 67.0
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 2.5e-25 118.6 88 65.9
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 2.5e-25 118.6 90 63.3
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 2.5e-25 118.6 84 67.9
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 4.3e-25 117.9 84 66.7
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 4.3e-25 117.9 93 60.2
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 5.6e-25 117.5 85 67.1
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 5.6e-25 117.5 89 61.8
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 7.4e-25 117.1 93 62.4
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 7.4e-25 117.1 90 63.3
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 7.4e-25 117.1 94 60.6
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 9.6e-25 116.7 91 60.4
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 9.6e-25 116.7 93 61.3
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 9.6e-25 116.7 94 59.6
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 9.6e-25 116.7 96 60.4
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 1.3e-24 116.3 90 62.2
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 1.3e-24 116.3 90 62.2
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 1.3e-24 116.3 86 64.0
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 1.3e-24 116.3 91 61.5
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 1.3e-24 116.3 85 64.7
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 1.3e-24 116.3 93 62.4
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 1.6e-24 115.9 89 62.9
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 1.6e-24 115.9 85 64.7
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 1.6e-24 115.9 86 65.1
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 2.1e-24 115.5 90 62.2
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 2.1e-24 115.5 86 65.1
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 2.1e-24 115.5 86 65.1
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 2.1e-24 115.5 85 64.7
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 2.1e-24 115.5 85 65.9
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 2.8e-24 115.2 90 62.2
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 2.8e-24 115.2 90 62.2
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 3.7e-24 114.8 87 66.7
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 3.7e-24 114.8 85 63.5
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 4.8e-24 114.4 85 64.7
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 4.8e-24 114.4 92 60.9
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 6.2e-24 114.0 90 63.3
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 8.2e-24 113.6 85 63.5
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 8.2e-24 113.6 90 60.0
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 1.1e-23 113.2 92 58.7
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 1.1e-23 113.2 92 57.6
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 1.8e-23 112.5 91 62.6
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 1.8e-23 112.5 90 61.1
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 1.8e-23 112.5 90 60.0
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 2.4e-23 112.1 88 61.4
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 2.4e-23 112.1 84 65.5
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 2.4e-23 112.1 90 61.1
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 2.4e-23 112.1 90 60.0
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 2.4e-23 112.1 85 64.7
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 3.1e-23 111.7 97 58.8
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 4.0e-23 111.3 94 57.4
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 5.3e-23 110.9 88 61.4
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 6.9e-23 110.5 85 63.5
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 9.0e-23 110.2 96 60.4
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 9.0e-23 110.2 81 66.7
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 2.6e-22 108.6 88 59.1
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.6e-22 108.6 103 56.3
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 5.8e-22 107.5 86 64.0
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 7.6e-22 107.1 80 62.5
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 1.3e-21 106.3 85 60.0
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 1.3e-21 106.3 88 65.9
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 1.3e-21 106.3 82 63.4
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 1.3e-21 106.3 103 54.4
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 1.7e-21 105.9 75 68.0
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 1.7e-21 105.9 86 62.8
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 2.2e-21 105.5 93 62.4
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 4.9e-21 104.4 86 62.8
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 1.9e-20 102.4 96 57.3
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 2.5e-20 102.1 85 62.4
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 3.2e-20 101.7 70 67.1
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 4.2e-20 101.3 80 58.8
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 5.5e-20 100.9 82 64.6
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 2.1e-19 99.0 80 66.2
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 2.3e-18 95.5 76 61.8
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 4.8e-16 87.8 72 63.9
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 2.4e-15 85.5 85 50.6
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 2.9e-13 78.6 154 34.4
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 3.8e-13 78.2 77 51.9
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 5.0e-13 77.8 109 42.2
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 6.5e-13 77.4 65 60.0
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 1.4e-12 76.3 46 76.1
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 4.2e-12 74.7 71 53.5
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 4.2e-12 74.7 47 74.5
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 9.4e-12 73.6 62 53.2
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 3.6e-11 71.6 68 55.9
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 4.6e-11 71.2 85 45.9
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 3.9e-10 68.2 60 53.3
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 5.1e-10 67.8 59 54.2
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 8.8e-10 67.0 59 52.5
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 1.3e-08 63.2 58 55.2
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 2.8e-08 62.0 58 58.6
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 4.8e-08 61.2 61 47.5
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 5.3e-07 57.8 34 76.5
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 2.0e-06 55.8 31 77.4


User provided reference genes

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