Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0322G015 Amborella trichopoda HOM05D000026 ORTHO05D007846 2.0e-80 302.4 150 100.0
PSO455G0003 Papaver somniferum HOM05D000026 ORTHO05D007846 3.9e-20 102.1 145 40.7
Gohir.D05G056500 Gossypium hirsutum HOM05D000026 ORTHO05D007846 5.1e-20 101.7 142 40.1
Gorai.009G057500 Gossypium raimondii HOM05D000026 ORTHO05D007846 6.7e-20 101.3 142 40.1
QL02p022031 Quercus lobata HOM05D000026 ORTHO05D007846 1.1e-19 100.5 126 43.7
QL02p022073 Quercus lobata HOM05D000026 ORTHO05D007846 1.9e-19 99.8 141 41.1
Thecc.09G026800 Theobroma cacao HOM05D000026 ORTHO05D007846 1.9e-19 99.8 149 38.9
Eucgr.C01758 Eucalyptus grandis HOM05D000026 ORTHO05D007846 3.3e-19 99.0 127 40.9
PSO170G4035 Papaver somniferum HOM05D000026 ORTHO05D007846 3.3e-19 99.0 145 39.3
TPR.G19800 Trifolium pratense HOM05D000026 ORTHO05D007846 3.3e-19 99.0 133 39.1
Dinv15956 Davidia involucrata HOM05D000026 ORTHO05D007846 7.4e-19 97.8 136 40.4
Glyma.20G072500 Glycine max HOM05D000026 ORTHO05D007846 7.4e-19 97.8 156 37.8
QL02p021994 Quercus lobata HOM05D009413 ORTHO05D000116 7.4e-19 97.8 142 40.1
Lj8C717T5 Lonicera japonica HOM05D000026 ORTHO05D007846 2.8e-18 95.9 143 39.2
Eucgr.C01754 Eucalyptus grandis HOM05D000026 ORTHO05D007846 4.8e-18 95.1 127 39.4
Medtr1g048360 Medicago truncatula HOM05D000026 ORTHO05D007846 6.3e-18 94.7 136 38.2
Glyma.10G121530 Glycine max HOM05D000026 ORTHO05D007846 8.2e-18 94.4 138 40.6
Migut.A00050 Erythranthe guttata HOM05D000026 ORTHO05D007846 1.1e-17 94.0 139 36.7
RcHm_v2.0_Chr6g0298101 Rosa chinensis HOM05D000026 ORTHO05D007846 4.1e-17 92.0 149 38.3
FAN24G1119 Fragaria x ananassa HOM05D000026 ORTHO05D007846 1.2e-16 90.5 149 37.6
CSS0027106 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D007846 2.0e-16 89.7 139 38.1
FAN20G2426 Fragaria x ananassa HOM05D000026 ORTHO05D007846 2.0e-16 89.7 150 38.7
Psat6g049080 Pisum sativum HOM05D000026 ORTHO05D007846 2.0e-16 89.7 136 36.8
FAN15G1249 Fragaria x ananassa HOM05D000026 ORTHO05D007846 2.6e-16 89.4 150 38.0
Phvul.007G234400 Phaseolus vulgaris HOM05D000026 ORTHO05D007846 4.5e-16 88.6 138 38.4
Atru.chr7.2404 Acer truncatum HOM05D000026 ORTHO05D007846 5.9e-16 88.2 125 40.8
AUR62012370 Chenopodium quinoa HOM05D000026 ORTHO05D007846 5.9e-16 88.2 124 38.7
TWI59G0533 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 5.9e-16 88.2 116 39.7
TWI59G1292 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 5.9e-16 88.2 116 39.7
TWI34G1723 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 7.6e-16 87.8 128 39.8
AUR62031498 Chenopodium quinoa HOM05D000026 ORTHO05D007846 1.0e-15 87.4 124 38.7
TWI60G0906 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 1.0e-15 87.4 114 40.4
Potri.018G028800 Populus trichocarpa HOM05D000026 ORTHO05D007846 1.3e-15 87.0 145 36.6
Ciclev10010693m.g Citrus clementina HOM05D000026 ORTHO05D007846 1.7e-15 86.7 137 38.7
Aqoxy7G02234 Aquilegia oxysepala HOM05D000026 ORTHO05D007846 6.5e-15 84.7 114 40.4
MD15G1124000 Malus domestica HOM05D000026 ORTHO05D007846 6.5e-15 84.7 124 38.7
TWI32G0973 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 1.1e-14 84.0 119 41.2
Peaxi162Scf00073g01325 Petunia axillaris HOM05D000026 ORTHO05D007846 3.2e-14 82.4 117 35.9
TWI59G0170 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 3.2e-14 82.4 119 39.5
Oeu041078.1 Olea europaea HOM05D000026 ORTHO05D007846 9.3e-14 80.9 141 34.8
Lj7C722T4 Lonicera japonica HOM05D000026 ORTHO05D007846 1.2e-13 80.5 103 40.8
DCAR_003092 Daucus carota HOM05D000026 ORTHO05D007846 1.6e-13 80.1 92 46.7
Lsat_1_v5_gn_5_30661 Lactuca sativa HOM05D000026 ORTHO05D007846 2.7e-13 79.3 139 34.5
TWI59G0822 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 2.7e-13 79.3 118 39.0
VMungo0720G1888 Vigna mungo HOM05D000026 ORTHO05D007846 2.7e-13 79.3 137 34.3
TWI59G0082 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 6.1e-13 78.2 118 37.3
TWI59G0530 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 6.1e-13 78.2 118 36.4
ECA246G4150 Erigeron canadensis HOM05D000026 ORTHO05D007846 1.0e-12 77.4 88 42.0
Ah.16g104340 Amaranthus hybridus HOM05D000026 ORTHO05D007846 1.4e-12 77.0 123 34.1
Lj7A720T83 Lonicera japonica HOM05D000026 ORTHO05D007846 1.4e-12 77.0 103 38.8
Actinidia22354 Actinidia chinensis HOM05D000026 ORTHO05D007846 1.8e-12 76.6 107 37.4
Cc08_g00830 Coffea canephora HOM05D000026 ORTHO05D007846 1.8e-12 76.6 140 31.4
AUR62012368 Chenopodium quinoa HOM05D005309 ORTHO05D006648 3.0e-12 75.9 124 37.1
EL10Ac2g04243 Beta vulgaris HOM05D000026 ORTHO05D007846 3.9e-12 75.5 115 38.3
Dinv18240 Davidia involucrata HOM05D000026 ORTHO05D007846 3.9e-12 75.5 112 40.2
TWI59G0077 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 3.9e-12 75.5 118 36.4
Nitab4.5_0000209g0070 Nicotiana tabacum HOM05D000026 ORTHO05D007846 5.1e-12 75.1 127 29.9
CANSAT78G1006 Cannabis sativa HOM05D000026 ORTHO05D007846 6.7e-12 74.7 79 44.3
AUR62031497 Chenopodium quinoa HOM05D000026 ORTHO05D007846 6.7e-12 74.7 116 37.9
TWI59G0790 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 8.8e-12 74.3 118 36.4
TWI59G1062 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 8.8e-12 74.3 118 36.4
Gohir.A05G054500 Gossypium hirsutum HOM05D000026 ORTHO05D007846 1.1e-11 73.9 100 41.0
Sc06g0000650 Simmondsia chinensis HOM05D000026 ORTHO05D007846 1.1e-11 73.9 121 34.7
Ciclev10009184m.g Citrus clementina HOM05D000026 ORTHO05D007846 1.5e-11 73.6 144 32.6
PGSC0003DMG400036377 Solanum tuberosum HOM05D000026 ORTHO05D007846 3.3e-11 72.4 139 31.7
Cc00_g22180 Coffea canephora HOM05D000026 ORTHO05D007846 4.3e-11 72.0 140 30.7
COL.COLO4_18840 Corchorus olitorius HOM05D000026 ORTHO05D007846 5.7e-11 71.6 97 39.2
Sopen08g016100 Solanum pennellii HOM05D000026 ORTHO05D007846 5.7e-11 71.6 99 34.3
TWI59G0735 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 5.7e-11 71.6 118 34.7
Sc09g0008310 Simmondsia chinensis HOM05D000026 ORTHO05D007846 9.7e-11 70.9 89 43.8
TWI59G1156 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 1.3e-10 70.5 118 34.7
Ca_12271_v3 Cicer arietinum L. HOM05D000026 ORTHO05D007846 1.7e-10 70.1 106 35.8
TWI34G0659 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 1.7e-10 70.1 118 37.3
Prupe.1G479400 Prunus persica HOM05D000026 ORTHO05D007846 2.8e-10 69.3 105 39.0
CAN.G68.12 Capsicum annuum HOM05D000026 ORTHO05D007846 3.7e-10 68.9 137 30.7
FAN27G1584 Fragaria x ananassa HOM05D000026 ORTHO05D007846 4.8e-10 68.6 106 37.7
Cpa.g.sc1805.1 Carica papaya HOM05D000026 ORTHO05D007846 6.3e-10 68.2 148 33.1
FvH4_2g29290 Fragaria vesca HOM05D000026 ORTHO05D007846 1.8e-09 66.6 105 37.1
TWI32G0082 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 3.1e-09 65.9 142 34.5
Cpa.g.c41462 Carica papaya HOM05D000026 ORTHO05D007846 4.1e-09 65.5 140 32.9
Ciclev10010234m.g Citrus clementina HOM05D000026 ORTHO05D007846 4.1e-09 65.5 116 34.5
SEGI_03284 Sequoiadendron giganteum HOM05D000026 ORTHO05D007846 6.9e-09 64.7 106 34.9
Os08g0514100 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D001436 1.7e-07 60.1 135 31.9
AUR62012369 Chenopodium quinoa HOM05D000026 ORTHO05D007846 2.9e-07 59.3 81 38.3
TWI32G0515 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 3.8e-07 58.9 145 30.3
Zm00001eb252540 Zea mays HOM05D000026 ORTHO05D001436 3.8e-07 58.9 134 31.3
Ciclev10010370m.g Citrus clementina HOM05D000026 ORTHO05D007846 5.0e-07 58.5 135 30.4
Eucgr.I02192 Eucalyptus grandis HOM05D000026 ORTHO05D001436 5.0e-07 58.5 79 43.0
TWI34G1322 Tripterygium wilfordii HOM05D000026 ORTHO05D007846 8.5e-07 57.8 124 29.0
CiPaw.09G029800 Carya illinoinensis HOM05D000026 ORTHO05D001436 1.1e-06 57.4 76 40.8
Eucgr.L02371 Eucalyptus grandis HOM05D000026 ORTHO05D001436 1.1e-06 57.4 79 41.8
Sabra06G0148300 Salix brachista HOM05D000026 ORTHO05D001436 1.1e-06 57.4 128 33.6
BcaC06g32390 Brassica carinata HOM05D000026 ORTHO05D001436 1.4e-06 57.0 119 34.5
BolC9t59743H Brassica oleracea HOM05D000026 ORTHO05D001436 1.4e-06 57.0 119 34.5
Cpa.g.sc2804.1 Carica papaya HOM05D000026 ORTHO05D016714 1.4e-06 57.0 115 33.0
MELO3C021878.2 Cucumis melo HOM05D000026 ORTHO05D000127 1.4e-06 57.0 135 26.7
Eucgr.I02181 Eucalyptus grandis HOM05D000026 ORTHO05D001436 1.4e-06 57.0 79 41.8
PGSC0003DMG401009415 Solanum tuberosum HOM05D000026 ORTHO05D001436 1.4e-06 57.0 89 33.7
C09p70010 Brassica napus HOM05D000026 ORTHO05D001436 1.9e-06 56.6 119 34.5
TPR.G32333 Trifolium pratense HOM05D000026 ORTHO05D001436 1.9e-06 56.6 142 33.1
CAN.G883.11 Capsicum annuum HOM05D000026 ORTHO05D001436 2.5e-06 56.2 89 34.8
vmacro20414 Vaccinium macrocarpon HOM05D000026 ORTHO05D001436 3.2e-06 55.8 79 40.5
Sp6g36110 Schrenkiella parvula HOM05D000026 ORTHO05D001436 5.5e-06 55.1 86 38.4
SEGI_14356 Sequoiadendron giganteum HOM05D000026 ORTHO05D007846 5.5e-06 55.1 134 27.6
SEGI_17864 Sequoiadendron giganteum HOM05D000026 ORTHO05D001436 5.5e-06 55.1 81 38.3
Zm00001eb188800 Zea mays HOM05D000026 ORTHO05D001436 5.5e-06 55.1 88 35.2
Migut.D02008 Erythranthe guttata HOM05D000026 ORTHO05D001436 7.2e-06 54.7 98 33.7
PGR142G3276 Punica granatum HOM05D000026 ORTHO05D001436 7.2e-06 54.7 94 35.1
A10p29640 Brassica napus HOM05D000026 ORTHO05D001436 9.4e-06 54.3 87 36.8
BraA10t45005Z Brassica rapa HOM05D000026 ORTHO05D001436 9.4e-06 54.3 87 36.8
CARHR206440 Cardamine hirsuta HOM05D000026 ORTHO05D001436 9.4e-06 54.3 87 37.9
CsaV3_2G036490 Cucumis sativus L. HOM05D000026 ORTHO05D000127 9.4e-06 54.3 91 35.2
Eucgr.I02194 Eucalyptus grandis HOM05D000026 ORTHO05D001436 9.4e-06 54.3 79 41.8
Os02g0712700 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D001436 9.4e-06 54.3 136 31.6
Potri.016G045000 Populus trichocarpa HOM05D000026 ORTHO05D001436 9.4e-06 54.3 142 31.7


User provided reference genes

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