Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 3.7e-123 444.9 225 100.0
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 6.0e-65 251.5 201 58.7
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 1.3e-62 243.8 219 52.5
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 1.6e-62 243.4 214 55.6
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 1.5e-60 236.9 202 54.5
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 3.4e-60 235.7 226 51.8
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 4.4e-60 235.3 201 53.7
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 7.6e-60 234.6 202 53.0
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 7.6e-60 234.6 201 54.2
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.7e-59 233.4 201 55.7
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 2.9e-59 232.6 202 52.5
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 4.9e-59 231.9 223 50.2
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 6.4e-59 231.5 212 50.9
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 6.4e-59 231.5 217 51.6
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 8.4e-59 231.1 201 52.7
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 1.4e-58 230.3 201 53.2
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 1.4e-58 230.3 202 53.0
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 2.4e-58 229.6 199 52.8
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 2.4e-58 229.6 202 53.0
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.4e-58 229.6 201 54.2
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 2.4e-58 229.6 215 49.8
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 3.2e-58 229.2 219 53.4
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 4.2e-58 228.8 202 52.5
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 4.2e-58 228.8 202 53.0
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 4.2e-58 228.8 202 53.0
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 4.2e-58 228.8 207 50.7
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 4.2e-58 228.8 220 50.0
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 4.2e-58 228.8 220 50.5
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 7.1e-58 228.0 219 52.1
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 7.1e-58 228.0 201 52.7
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 7.1e-58 228.0 204 52.9
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 9.3e-58 227.6 202 51.5
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 9.3e-58 227.6 215 53.0
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 9.3e-58 227.6 220 50.0
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 1.2e-57 227.3 201 52.2
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 1.6e-57 226.9 219 50.2
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 2.1e-57 226.5 209 52.6
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 2.1e-57 226.5 217 49.8
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 2.1e-57 226.5 222 50.0
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 2.1e-57 226.5 200 53.5
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 2.7e-57 226.1 202 52.0
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 2.7e-57 226.1 217 48.8
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 3.5e-57 225.7 217 49.3
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 3.5e-57 225.7 214 51.4
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 7.9e-57 224.6 204 52.9
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 1.0e-56 224.2 220 50.0
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 1.0e-56 224.2 201 50.2
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 1.3e-56 223.8 219 51.6
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 1.7e-56 223.4 201 51.2
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 3.0e-56 222.6 202 51.5
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 3.0e-56 222.6 201 53.7
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 5.1e-56 221.9 202 52.5
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 5.1e-56 221.9 220 48.6
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 6.6e-56 221.5 201 50.2
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 6.6e-56 221.5 201 51.2
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 6.6e-56 221.5 211 50.7
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 8.7e-56 221.1 202 51.0
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 1.1e-55 220.7 202 50.5
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 1.5e-55 220.3 216 49.1
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 5.6e-55 218.4 207 49.8
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 7.4e-55 218.0 201 51.2
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 1.6e-54 216.9 180 56.1
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 1.6e-54 216.9 200 50.0
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 1.6e-54 216.9 200 51.0
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 1.6e-54 216.9 202 49.0
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 2.1e-54 216.5 196 53.1
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 2.8e-54 216.1 202 49.0
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 8.1e-54 214.5 202 48.5
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 8.1e-54 214.5 207 48.3
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 1.8e-53 213.4 211 48.3
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 2.4e-53 213.0 202 48.5
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 6.9e-53 211.5 211 49.3
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 1.2e-52 210.7 211 50.7
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 1.2e-52 210.7 228 44.3
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 2.6e-52 209.5 209 48.3
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 2.6e-52 209.5 209 48.3
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 9.9e-52 207.6 234 42.7
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 2.9e-51 206.1 240 42.1
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 4.9e-51 205.3 234 42.7
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 8.4e-51 204.5 205 47.8
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 5.5e-50 201.8 201 47.3
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 1.6e-49 200.3 185 49.2
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 7.9e-49 198.0 201 48.3
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 1.0e-48 197.6 199 48.2
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 5.1e-48 195.3 190 48.9
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 2.1e-46 189.9 192 48.4
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 2.4e-45 186.4 176 49.4
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 2.4e-45 186.4 152 55.9
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 1.2e-44 184.1 201 46.8
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 5.8e-44 181.8 188 48.4
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 1.9e-42 176.8 195 46.2
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 1.2e-41 174.1 172 47.1
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 1.2e-41 174.1 223 42.2
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 1.6e-41 173.7 187 44.9
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.0e-40 171.0 163 50.9
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 5.1e-40 168.7 163 45.4
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 1.5e-39 167.2 219 41.1
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 9.6e-39 164.5 197 40.6
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.1e-37 161.0 209 38.8
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 2.4e-37 159.8 161 48.4
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 8.4e-35 151.4 130 56.2
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 9.7e-23 111.3 105 49.5
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 6.3e-22 108.6 87 56.3
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 9.1e-21 104.8 67 62.7
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 5.9e-20 102.1 96 50.0
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.3e-19 100.9 161 37.9
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 3.8e-19 99.4 99 47.5
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 4.2e-18 95.9 84 56.0
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 3.8e-11 72.8 115 36.5


User provided reference genes

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